RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 ARHGAP45Q92619 1136 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 TIGD1Q96MW7 591 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.52□□□□□ -1.37
ERCC6-213ENST00000624341 RNF216Q9NWF9 866 aaPredicted RBP6.52□□□□□ -1.37
ERCC6-213ENST00000624341 ORC3Q9UBD5 711 aaPredicted RBP6.52□□□□□ -1.37
ERCC6-213ENST00000624341 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.52□□□□□ -1.37
ERCC6-213ENST00000624341 IQGAP3Q86VI3 1631 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 VWDEQ8N2E2 1590 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 PRDM15P57071 1507 aaPredicted RBP6.52□□□□□ -1.37
ERCC6-213ENST00000624341 IL16Q14005 1332 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 UBAP1LF5GYI3 381 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 ZNF213O14771 459 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 SEPT7Q16181 437 aaKnown RBP6.52□□□□□ -1.37
ERCC6-213ENST00000624341 CCDC144CPQ8IYA2 1237 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 ANKRD44Q8N8A2 993 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 C8orf58Q8NAV2 365 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 SNRKQ9NRH2 765 aa6.52□□□□□ -1.37
ERCC6-213ENST00000624341 KDM5AP29375 1690 aaKnown RBP6.51□□□□□ -1.37
ERCC6-213ENST00000624341 GOLIM4O00461 696 aa6.51□□□□□ -1.37
ERCC6-213ENST00000624341 LIG1P18858 919 aa6.51□□□□□ -1.37
ERCC6-213ENST00000624341 NAPBQ9H115 298 aa6.51□□□□□ -1.37
ERCC6-213ENST00000624341 RBSNQ9H1K0 784 aa6.51□□□□□ -1.37
ERCC6-213ENST00000624341 ERVK-7P63135 1459 aa6.51□□□□□ -1.37
ERCC6-213ENST00000624341 CAVIN2O95810 425 aa6.51□□□□□ -1.37
ERCC6-213ENST00000624341 F13A1P00488 732 aa6.51□□□□□ -1.37
ERCC6-213ENST00000624341 PTGS1P23219 599 aa6.51□□□□□ -1.37
ERCC6-213ENST00000624341 SCAF11Q99590 1463 aaKnown RBP6.51□□□□□ -1.37
ERCC6-213ENST00000624341 HS1BP3Q53T59 392 aa6.51□□□□□ -1.37
ERCC6-213ENST00000624341 RNF187Q5TA31 235 aaPredicted RBP6.51□□□□□ -1.37
ERCC6-213ENST00000624341 GIMAP7Q8NHV1 300 aa6.51□□□□□ -1.37
ERCC6-213ENST00000624341 CCDC113Q9H0I3 377 aa6.51□□□□□ -1.37
ERCC6-213ENST00000624341 CEP152O94986 1710 aa6.51□□□□□ -1.37
ERCC6-213ENST00000624341 CCDC171Q6TFL3 1326 aa6.51□□□□□ -1.37
ERCC6-213ENST00000624341 JARID2Q92833 1246 aaPredicted RBP6.51□□□□□ -1.37
ERCC6-213ENST00000624341 CCDC94Q9BW85 323 aaPredicted RBP6.51□□□□□ -1.37
ERCC6-213ENST00000624341 DBF4Q9UBU7 674 aaPredicted RBP6.51□□□□□ -1.37
ERCC6-213ENST00000624341 SLC12A7Q9Y666 1083 aa6.51□□□□□ -1.37
ERCC6-213ENST00000624341 ARHGAP31Q2M1Z3 1444 aa6.5□□□□□ -1.37
ERCC6-213ENST00000624341 UBASH3AP57075 661 aa6.5□□□□□ -1.37
ERCC6-213ENST00000624341 MCM6Q14566 821 aa6.5□□□□□ -1.37
ERCC6-213ENST00000624341 CACNA2D4Q7Z3S7 1137 aa6.5□□□□□ -1.37
ERCC6-213ENST00000624341 LUZP1Q86V48 1076 aa6.5□□□□□ -1.37
ERCC6-213ENST00000624341 ZBTB40Q9NUA8 1239 aa6.5□□□□□ -1.37
ERCC6-213ENST00000624341 NEURL4Q96JN8 1562 aa6.5□□□□□ -1.37
ERCC6-213ENST00000624341 A0A087WZG4 1122 aa6.5□□□□□ -1.37
ERCC6-213ENST00000624341 GOLGA8AA7E2F4 631 aa6.5□□□□□ -1.37
ERCC6-213ENST00000624341 IFIT3O14879 490 aaKnown RBP6.5□□□□□ -1.37
ERCC6-213ENST00000624341 YEATS4O95619 227 aa6.5□□□□□ -1.37
ERCC6-213ENST00000624341 PAFAH1B1P43034 410 aa6.5□□□□□ -1.37
ERCC6-213ENST00000624341 MICU3Q86XE3 530 aa6.5□□□□□ -1.37
ERCC6-213ENST00000624341 MRPL50Q8N5N7 158 aaKnown RBP6.5□□□□□ -1.37
ERCC6-213ENST00000624341 TSPYL6Q8N831 410 aa6.5□□□□□ -1.37
ERCC6-213ENST00000624341 GPATCH11Q8N954 259 aa6.5□□□□□ -1.37
ERCC6-213ENST00000624341 CCDC150Q8NCX0 1101 aa6.5□□□□□ -1.37
ERCC6-213ENST00000624341 BCCIPQ9P287 314 aaKnown RBP eCLIP6.5□□□□□ -1.37
ERCC6-213ENST00000624341 MATR3P43243 847 aaKnown RBP eCLIP6.5□□□□□ -1.37
ERCC6-213ENST00000624341 USP5P45974 858 aa6.5□□□□□ -1.37
ERCC6-213ENST00000624341 TYRO3Q06418 890 aa6.5□□□□□ -1.37
ERCC6-213ENST00000624341 CCDC102BQ68D86 513 aa6.5□□□□□ -1.37
ERCC6-213ENST00000624341 AOPEPQ8N6M6 819 aa6.5□□□□□ -1.37
ERCC6-213ENST00000624341 MAP3K2Q9Y2U5 619 aa6.5□□□□□ -1.37
ERCC6-213ENST00000624341 RBM8AQ9Y5S9 174 aaKnown RBP6.5□□□□□ -1.37
ERCC6-213ENST00000624341 ANAPC15P60006 121 aa6.5□□□□□ -1.37
ERCC6-213ENST00000624341 FKBP15Q5T1M5 1219 aa6.5□□□□□ -1.37
ERCC6-213ENST00000624341 CTR9Q6PD62 1173 aa6.5□□□□□ -1.37
ERCC6-213ENST00000624341 AKAP2Q9Y2D5 859 aa6.5□□□□□ -1.37
ERCC6-213ENST00000624341 CCDC196A0A1B0GTZ2 297 aa6.5□□□□□ -1.37
ERCC6-213ENST00000624341 IARSP41252 1262 aaKnown RBP6.5□□□□□ -1.37
ERCC6-213ENST00000624341 TDRD12Q587J7 1177 aaKnown RBP6.5□□□□□ -1.37
ERCC6-213ENST00000624341 DDX46Q7L014 1031 aaKnown RBP6.5□□□□□ -1.37
ERCC6-213ENST00000624341 PLEKHM2Q8IWE5 1019 aa6.5□□□□□ -1.37
ERCC6-213ENST00000624341 ZSCAN16Q9H4T2 348 aaPredicted RBP6.5□□□□□ -1.37
ERCC6-213ENST00000624341 ARFGAP3Q9NP61 516 aa6.5□□□□□ -1.37
ERCC6-213ENST00000624341 SLU7O95391 586 aaKnown RBP6.49□□□□□ -1.37
ERCC6-213ENST00000624341 LMOD1P29536 600 aaPredicted RBP6.49□□□□□ -1.37
ERCC6-213ENST00000624341 IDI1Q13907 227 aa6.49□□□□□ -1.37
ERCC6-213ENST00000624341 DYDC1Q8WWB3 177 aa6.49□□□□□ -1.37
ERCC6-213ENST00000624341 GOLGA6L9A6NEM1 432 aa6.49□□□□□ -1.37
ERCC6-213ENST00000624341 ATP5J2-PTCD1G3V325 749 aa6.49□□□□□ -1.37
ERCC6-213ENST00000624341 RANBP6O60518 1105 aaKnown RBP6.49□□□□□ -1.37
ERCC6-213ENST00000624341 MCM3P25205 808 aa6.49□□□□□ -1.37
ERCC6-213ENST00000624341 SSRP1Q08945 709 aaKnown RBP6.49□□□□□ -1.37
ERCC6-213ENST00000624341 FAM107BQ9H098 131 aa6.49□□□□□ -1.37
ERCC6-213ENST00000624341 DCTPP1Q9H773 170 aa6.49□□□□□ -1.37
ERCC6-213ENST00000624341 ZNF335Q9H4Z2 1342 aaPredicted RBP6.49□□□□□ -1.37
ERCC6-213ENST00000624341 USO1O60763 962 aaKnown RBP6.49□□□□□ -1.37
ERCC6-213ENST00000624341 SYKP43405 635 aa6.49□□□□□ -1.37
ERCC6-213ENST00000624341 AK2P54819 239 aa6.49□□□□□ -1.37
ERCC6-213ENST00000624341 HLTFQ14527 1009 aaKnown RBP eCLIP6.49□□□□□ -1.37
ERCC6-213ENST00000624341 SPECC1Q5M775 1068 aa6.49□□□□□ -1.37
ERCC6-213ENST00000624341 C17orf53Q8N3J3 647 aaPredicted RBP6.49□□□□□ -1.37
ERCC6-213ENST00000624341 BBXQ8WY36 941 aaPredicted RBP6.49□□□□□ -1.37
ERCC6-213ENST00000624341 UBR1Q8IWV7 1749 aa6.49□□□□□ -1.37
ERCC6-213ENST00000624341 KRT24Q2M2I5 525 aa6.49□□□□□ -1.37
ERCC6-213ENST00000624341 CCDC178Q5BJE1 867 aa6.49□□□□□ -1.37
ERCC6-213ENST00000624341 USP26Q9BXU7 913 aa6.49□□□□□ -1.37
ERCC6-213ENST00000624341 POTEB2H3BUK9 544 aa6.48□□□□□ -1.37
ERCC6-213ENST00000624341 WASLO00401 505 aaPredicted RBP6.48□□□□□ -1.37
ERCC6-213ENST00000624341 IFFO1Q0D2I5 559 aa6.48□□□□□ -1.37
ERCC6-213ENST00000624341 SF3B2Q13435 895 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms