RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 DAPK3O43293 454 aa7.18□□□□□ -1.26
CDKL5-205ENST00000623535 FASTKD5Q7L8L6 764 aaKnown RBP7.18□□□□□ -1.26
CDKL5-205ENST00000623535 SPINK5Q9NQ38 1064 aaPredicted RBP7.18□□□□□ -1.26
CDKL5-205ENST00000623535 ATAD2Q6PL18 1390 aa7.18□□□□□ -1.26
CDKL5-205ENST00000623535 CCER2I3L3R5 266 aa7.18□□□□□ -1.26
CDKL5-205ENST00000623535 WDR63Q8IWG1 891 aa7.18□□□□□ -1.26
CDKL5-205ENST00000623535 TRIML1Q8N9V2 468 aa7.18□□□□□ -1.26
CDKL5-205ENST00000623535 OPTNQ96CV9 577 aa7.18□□□□□ -1.26
CDKL5-205ENST00000623535 AACSQ86V21 672 aa7.18□□□□□ -1.26
CDKL5-205ENST00000623535 ELMOD1Q8N336 334 aa7.18□□□□□ -1.26
CDKL5-205ENST00000623535 PRAM1Q96QH2 718 aa7.18□□□□□ -1.26
CDKL5-205ENST00000623535 ATP2A2P16615 1042 aaKnown RBP7.18□□□□□ -1.26
CDKL5-205ENST00000623535 USP48Q86UV5 1035 aa7.18□□□□□ -1.26
CDKL5-205ENST00000623535 SLC12A7Q9Y666 1083 aa7.18□□□□□ -1.26
CDKL5-205ENST00000623535 ALDH1B1P30837 517 aa7.18□□□□□ -1.26
CDKL5-205ENST00000623535 GSE1Q14687 1217 aa7.18□□□□□ -1.26
CDKL5-205ENST00000623535 LEKR1Q6ZMV7 388 aa7.18□□□□□ -1.26
CDKL5-205ENST00000623535 AFAP1L2Q8N4X5 818 aa7.18□□□□□ -1.26
CDKL5-205ENST00000623535 MAK16Q9BXY0 300 aaKnown RBP7.18□□□□□ -1.26
CDKL5-205ENST00000623535 MYOM3Q5VTT5 1437 aa7.18□□□□□ -1.26
CDKL5-205ENST00000623535 WDR7Q9Y4E6 1490 aa7.18□□□□□ -1.26
CDKL5-205ENST00000623535 USP47Q96K76 1375 aa7.18□□□□□ -1.26
CDKL5-205ENST00000623535 MCM3P25205 808 aa7.18□□□□□ -1.26
CDKL5-205ENST00000623535 NAP1L4Q99733 375 aaKnown RBP7.18□□□□□ -1.26
CDKL5-205ENST00000623535 PLEKHG3A1L390 1219 aa7.17□□□□□ -1.26
CDKL5-205ENST00000623535 CUX1P39880 1505 aa7.17□□□□□ -1.26
CDKL5-205ENST00000623535 CDC45O75419 566 aa7.17□□□□□ -1.26
CDKL5-205ENST00000623535 ARMC9Q7Z3E5 817 aa7.17□□□□□ -1.26
CDKL5-205ENST00000623535 MICAL1Q8TDZ2 1067 aa7.17□□□□□ -1.26
CDKL5-205ENST00000623535 APBA3O96018 575 aa7.17□□□□□ -1.26
CDKL5-205ENST00000623535 BPIFB4P59827 614 aa7.17□□□□□ -1.26
CDKL5-205ENST00000623535 NOX5Q96PH1 765 aa7.17□□□□□ -1.26
CDKL5-205ENST00000623535 KIF28PB7ZC32 967 aa7.17□□□□□ -1.26
CDKL5-205ENST00000623535 RXRBP28702 533 aa7.17□□□□□ -1.26
CDKL5-205ENST00000623535 MARCKSP29966 332 aaPredicted RBP7.17□□□□□ -1.26
CDKL5-205ENST00000623535 PTGDRQ13258 359 aa7.17□□□□□ -1.26
CDKL5-205ENST00000623535 N4BP2L2Q92802 583 aaPredicted RBP7.17□□□□□ -1.26
CDKL5-205ENST00000623535 HYPKQ9NX55 129 aa7.17□□□□□ -1.26
CDKL5-205ENST00000623535 FAM169AQ9Y6X4 670 aa7.17□□□□□ -1.26
CDKL5-205ENST00000623535 GOLGA6CA6NDK9 693 aa7.17□□□□□ -1.26
CDKL5-205ENST00000623535 GOLGA6BA6NDN3 693 aa7.17□□□□□ -1.26
CDKL5-205ENST00000623535 GOLGA6DP0CG33 693 aa7.17□□□□□ -1.26
CDKL5-205ENST00000623535 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.17□□□□□ -1.26
CDKL5-205ENST00000623535 GOLGA6AQ9NYA3 693 aa7.17□□□□□ -1.26
CDKL5-205ENST00000623535 USO1O60763 962 aaKnown RBP7.17□□□□□ -1.26
CDKL5-205ENST00000623535 SIN3AQ96ST3 1273 aa7.17□□□□□ -1.26
CDKL5-205ENST00000623535 NBPF26B4DH59 902 aa7.17□□□□□ -1.26
CDKL5-205ENST00000623535 PSMC4P43686 418 aa7.17□□□□□ -1.26
CDKL5-205ENST00000623535 GOPCQ9HD26 462 aa7.17□□□□□ -1.26
CDKL5-205ENST00000623535 ZNF277Q9NRM2 450 aaPredicted RBP7.17□□□□□ -1.26
CDKL5-205ENST00000623535 PRPF40AO75400 957 aaKnown RBP7.17□□□□□ -1.26
CDKL5-205ENST00000623535 SMTNP53814 917 aa7.17□□□□□ -1.26
CDKL5-205ENST00000623535 TRMT1LQ7Z2T5 733 aaKnown RBP7.17□□□□□ -1.26
CDKL5-205ENST00000623535 KRT28Q7Z3Y7 464 aa7.17□□□□□ -1.26
CDKL5-205ENST00000623535 IFT74Q96LB3 600 aa7.16□□□□□ -1.26
CDKL5-205ENST00000623535 ZNF830Q96NB3 372 aaPredicted RBP7.16□□□□□ -1.26
CDKL5-205ENST00000623535 SLC7A5P2Q9GIP4 190 aa7.16□□□□□ -1.26
CDKL5-205ENST00000623535 BCS1LQ9Y276 419 aa7.16□□□□□ -1.26
CDKL5-205ENST00000623535 TCERG1LQ5VWI1 586 aa7.16□□□□□ -1.26
CDKL5-205ENST00000623535 CCDC83Q8IWF9 413 aa7.16□□□□□ -1.26
CDKL5-205ENST00000623535 PRPF38AQ8NAV1 312 aaKnown RBP7.16□□□□□ -1.26
CDKL5-205ENST00000623535 NAA15Q9BXJ9 866 aaKnown RBP7.16□□□□□ -1.26
CDKL5-205ENST00000623535 CARD10Q9BWT7 1032 aa7.16□□□□□ -1.26
CDKL5-205ENST00000623535 KIAA1841Q6NSI8 718 aa7.16□□□□□ -1.26
CDKL5-205ENST00000623535 IFNL2Q8IZJ0 200 aa7.16□□□□□ -1.26
CDKL5-205ENST00000623535 DPYDQ12882 1025 aa7.16□□□□□ -1.26
CDKL5-205ENST00000623535 INF2Q27J81 1249 aa7.16□□□□□ -1.26
CDKL5-205ENST00000623535 CNBD1Q8NA66 436 aa7.16□□□□□ -1.26
CDKL5-205ENST00000623535 ZBED4O75132 1171 aa7.16□□□□□ -1.26
CDKL5-205ENST00000623535 SEPT6Q14141 434 aa7.16□□□□□ -1.26
CDKL5-205ENST00000623535 CCDC40Q4G0X9 1142 aa7.16□□□□□ -1.26
CDKL5-205ENST00000623535 PHF8Q9UPP1 1060 aa7.16□□□□□ -1.26
CDKL5-205ENST00000623535 FAM13AO94988 1023 aa7.16□□□□□ -1.26
CDKL5-205ENST00000623535 UBE4AQ14139 1066 aa7.16□□□□□ -1.26
CDKL5-205ENST00000623535 GANCQ8TET4 914 aa7.16□□□□□ -1.26
CDKL5-205ENST00000623535 NAIPQ13075 1403 aa7.16□□□□□ -1.26
CDKL5-205ENST00000623535 NBPF7P0C2Y1 421 aaPredicted RBP7.16□□□□□ -1.26
CDKL5-205ENST00000623535 P4HA1P13674 534 aa7.16□□□□□ -1.26
CDKL5-205ENST00000623535 TPD52P55327 224 aaPredicted RBP7.16□□□□□ -1.26
CDKL5-205ENST00000623535 GEN1Q17RS7 908 aa7.16□□□□□ -1.26
CDKL5-205ENST00000623535 DPH6Q7L8W6 267 aa7.16□□□□□ -1.26
CDKL5-205ENST00000623535 UQCRFS1P1P0C7P4 283 aa7.16□□□□□ -1.26
CDKL5-205ENST00000623535 IFFO1Q0D2I5 559 aa7.16□□□□□ -1.26
CDKL5-205ENST00000623535 FAM212AQ96EL1 285 aa7.16□□□□□ -1.26
CDKL5-205ENST00000623535 DISP3Q9P2K9 1392 aa7.15□□□□□ -1.26
CDKL5-205ENST00000623535 RUFY4Q6ZNE9 571 aa7.15□□□□□ -1.26
CDKL5-205ENST00000623535 EVI5LQ96CN4 794 aa7.15□□□□□ -1.26
CDKL5-205ENST00000623535 STX10O60499 249 aa7.15□□□□□ -1.26
CDKL5-205ENST00000623535 OSBPP22059 807 aa7.15□□□□□ -1.26
CDKL5-205ENST00000623535 RBM46Q8TBY0 533 aaKnown RBP7.15□□□□□ -1.26
CDKL5-205ENST00000623535 KIFC2Q96AC6 838 aa7.15□□□□□ -1.26
CDKL5-205ENST00000623535 STRN3Q13033 797 aa7.15□□□□□ -1.26
CDKL5-205ENST00000623535 NUTM1Q86Y26 1132 aa7.15□□□□□ -1.26
CDKL5-205ENST00000623535 CCDC85AQ96PX6 553 aaPredicted RBP7.15□□□□□ -1.26
CDKL5-205ENST00000623535 AP5M1Q9H0R1 490 aa7.15□□□□□ -1.26
CDKL5-205ENST00000623535 NUP62CLQ9H1M0 184 aa7.15□□□□□ -1.26
CDKL5-205ENST00000623535 PTPRCP08575 1304 aa7.15□□□□□ -1.26
CDKL5-205ENST00000623535 WDR46O15213 610 aaKnown RBP7.15□□□□□ -1.26
CDKL5-205ENST00000623535 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.15□□□□□ -1.26
CDKL5-205ENST00000623535 ZBTB16Q05516 673 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms