RNA–Protein interactions for RNA: ENST00000623529.1

LINC01561-202, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

Gene LINC01561, Length 2,160 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-202ENST00000623529 COL23A1Q86Y22 540 aaPredicted RBP12.49□□□□□ -0.41
LINC01561-202ENST00000623529 NUTM1Q86Y26 1132 aa12.49□□□□□ -0.41
LINC01561-202ENST00000623529 SMARCA5O60264 1052 aaPredicted RBP12.49□□□□□ -0.41
LINC01561-202ENST00000623529 HMMRO75330 724 aa12.49□□□□□ -0.41
LINC01561-202ENST00000623529 RFX5P48382 616 aaPredicted RBP12.49□□□□□ -0.41
LINC01561-202ENST00000623529 C16orf71Q8IYS4 520 aaPredicted RBP12.49□□□□□ -0.41
LINC01561-202ENST00000623529 LNPKQ9C0E8 428 aa12.49□□□□□ -0.41
LINC01561-202ENST00000623529 UBR3Q6ZT12 1888 aa12.48□□□□□ -0.41
LINC01561-202ENST00000623529 SURF6O75683 361 aaKnown RBP12.48□□□□□ -0.41
LINC01561-202ENST00000623529 NTSR2O95665 410 aa12.48□□□□□ -0.41
LINC01561-202ENST00000623529 GYS1P13807 737 aa12.48□□□□□ -0.41
LINC01561-202ENST00000623529 ADRA2BP18089 450 aa12.48□□□□□ -0.41
LINC01561-202ENST00000623529 SSFA2P28290 1259 aa12.48□□□□□ -0.41
LINC01561-202ENST00000623529 RGS3P49796 1198 aa12.48□□□□□ -0.41
LINC01561-202ENST00000623529 CHD1LQ86WJ1 897 aa12.48□□□□□ -0.41
LINC01561-202ENST00000623529 NAP1L5Q96NT1 182 aaPredicted RBP12.48□□□□□ -0.41
LINC01561-202ENST00000623529 CCDC85AQ96PX6 553 aaPredicted RBP12.48□□□□□ -0.41
LINC01561-202ENST00000623529 UTP14AQ9BVJ6 771 aaKnown RBP12.48□□□□□ -0.41
LINC01561-202ENST00000623529 HDAC5Q9UQL6 1122 aa12.48□□□□□ -0.41
LINC01561-202ENST00000623529 ZNF652Q9Y2D9 606 aa12.48□□□□□ -0.41
LINC01561-202ENST00000623529 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.48□□□□□ -0.41
LINC01561-202ENST00000623529 IRS4O14654 1257 aaPredicted RBP12.47□□□□□ -0.41
LINC01561-202ENST00000623529 HCLS1P14317 486 aaPredicted RBP12.47□□□□□ -0.41
LINC01561-202ENST00000623529 PARP10Q53GL7 1025 aa12.47□□□□□ -0.41
LINC01561-202ENST00000623529 ZMYND15Q9H091 742 aa12.47□□□□□ -0.41
LINC01561-202ENST00000623529 CSF1RP07333 972 aa12.47□□□□□ -0.41
LINC01561-202ENST00000623529 NFIXQ14938 502 aa12.47□□□□□ -0.41
LINC01561-202ENST00000623529 CCDC24Q8N4L8 307 aa12.47□□□□□ -0.41
LINC01561-202ENST00000623529 PLA2G12BQ9BX93 195 aa12.47□□□□□ -0.41
LINC01561-202ENST00000623529 CDHR2Q9BYE9 1310 aa12.47□□□□□ -0.41
LINC01561-202ENST00000623529 RGL2O15211 777 aa12.46□□□□□ -0.41
LINC01561-202ENST00000623529 PTPN12Q05209 780 aaKnown RBP12.46□□□□□ -0.41
LINC01561-202ENST00000623529 TTLL11Q8NHH1 800 aa12.46□□□□□ -0.41
LINC01561-202ENST00000623529 SETDB2Q96T68 719 aa12.46□□□□□ -0.41
LINC01561-202ENST00000623529 ANKRD36CQ5JPF3 1778 aa12.46□□□□□ -0.41
LINC01561-202ENST00000623529 C4AP0C0L4 1744 aa12.46□□□□□ -0.42
LINC01561-202ENST00000623529 ERFEQ4G0M1 354 aa12.46□□□□□ -0.42
LINC01561-202ENST00000623529 OTUD7AQ8TE49 926 aaPredicted RBP12.46□□□□□ -0.42
LINC01561-202ENST00000623529 ZNF594Q96JF6 807 aaPredicted RBP12.46□□□□□ -0.42
LINC01561-202ENST00000623529 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.46□□□□□ -0.42
LINC01561-202ENST00000623529 BCORQ6W2J9 1755 aa12.46□□□□□ -0.42
LINC01561-202ENST00000623529 PNPLA7Q6ZV29 1317 aa12.46□□□□□ -0.42
LINC01561-202ENST00000623529 SH3TC1Q8TE82 1336 aa12.46□□□□□ -0.42
LINC01561-202ENST00000623529 TM4SF1P30408 202 aa12.45□□□□□ -0.42
LINC01561-202ENST00000623529 SLC15A2Q16348 729 aa12.45□□□□□ -0.42
LINC01561-202ENST00000623529 C3orf67Q6ZVT6 689 aa12.45□□□□□ -0.42
LINC01561-202ENST00000623529 PAXIP1Q6ZW49 1069 aaPredicted RBP12.45□□□□□ -0.42
LINC01561-202ENST00000623529 PDGFDQ9GZP0 370 aaPredicted RBP12.45□□□□□ -0.42
LINC01561-202ENST00000623529 CHMP3Q9Y3E7 222 aa12.45□□□□□ -0.42
LINC01561-202ENST00000623529 PDE8AO60658 829 aa12.45□□□□□ -0.42
LINC01561-202ENST00000623529 SIL1Q9H173 461 aa12.45□□□□□ -0.42
LINC01561-202ENST00000623529 SASH1O94885 1247 aa12.44□□□□□ -0.42
LINC01561-202ENST00000623529 FAM161AQ3B820 660 aa12.44□□□□□ -0.42
LINC01561-202ENST00000623529 GREM2Q9H772 168 aa12.44□□□□□ -0.42
LINC01561-202ENST00000623529 IL1RAPL2Q9NP60 686 aa12.44□□□□□ -0.42
LINC01561-202ENST00000623529 COPRSQ9NQ92 184 aa12.44□□□□□ -0.42
LINC01561-202ENST00000623529 CTSWP56202 376 aa12.43□□□□□ -0.42
LINC01561-202ENST00000623529 PLCB2Q00722 1185 aa12.43□□□□□ -0.42
LINC01561-202ENST00000623529 RHPN1Q8TCX5 695 aa12.43□□□□□ -0.42
LINC01561-202ENST00000623529 SLC10A5Q5PT55 438 aa12.43□□□□□ -0.42
LINC01561-202ENST00000623529 NBPF5PQ86XG9 351 aaPredicted RBP12.43□□□□□ -0.42
LINC01561-202ENST00000623529 BACH2Q9BYV9 841 aa12.43□□□□□ -0.42
LINC01561-202ENST00000623529 PUS3Q9BZE2 481 aaKnown RBP12.43□□□□□ -0.42
LINC01561-202ENST00000623529 SCN7AQ01118 1682 aa12.43□□□□□ -0.42
LINC01561-202ENST00000623529 HMGB2P26583 209 aaKnown RBP12.42□□□□□ -0.42
LINC01561-202ENST00000623529 DDR1Q08345 913 aa12.42□□□□□ -0.42
LINC01561-202ENST00000623529 LRRC24Q50LG9 513 aa12.42□□□□□ -0.42
LINC01561-202ENST00000623529 TPTE2Q6XPS3 522 aa12.42□□□□□ -0.42
LINC01561-202ENST00000623529 LRRCC1Q9C099 1032 aa12.42□□□□□ -0.42
LINC01561-202ENST00000623529 SEC31BQ9NQW1 1179 aa12.42□□□□□ -0.42
LINC01561-202ENST00000623529 RGPD3A6NKT7 1758 aaPredicted RBP12.42□□□□□ -0.42
LINC01561-202ENST00000623529 RGPD4Q7Z3J3 1758 aa12.42□□□□□ -0.42
LINC01561-202ENST00000623529 ATG9AQ7Z3C6 839 aa12.42□□□□□ -0.42
LINC01561-202ENST00000623529 PLEKHM2Q8IWE5 1019 aa12.42□□□□□ -0.42
LINC01561-202ENST00000623529 RAB11FIP3O75154 756 aa12.41□□□□□ -0.42
LINC01561-202ENST00000623529 ITGA6P23229 1130 aa12.41□□□□□ -0.42
LINC01561-202ENST00000623529 GTF2E1P29083 439 aaPredicted RBP12.41□□□□□ -0.42
LINC01561-202ENST00000623529 ABCC12Q96J65 1359 aa12.41□□□□□ -0.42
LINC01561-202ENST00000623529 TUBGCP6Q96RT7 1819 aa12.41□□□□□ -0.42
LINC01561-202ENST00000623529 SERPINB2P05120 415 aa12.4□□□□□ -0.42
LINC01561-202ENST00000623529 G3BP1Q13283 466 aaKnown RBP eCLIP12.4□□□□□ -0.42
LINC01561-202ENST00000623529 CCDC57Q2TAC2 916 aa12.4□□□□□ -0.42
LINC01561-202ENST00000623529 MSL1Q68DK7 614 aa12.4□□□□□ -0.42
LINC01561-202ENST00000623529 STK32BQ9NY57 414 aa12.4□□□□□ -0.42
LINC01561-202ENST00000623529 POLRMTO00411 1230 aaKnown RBP12.4□□□□□ -0.42
LINC01561-202ENST00000623529 IFIT5Q13325 482 aaKnown RBP12.4□□□□□ -0.42
LINC01561-202ENST00000623529 OS9Q13438 667 aaPredicted RBP12.4□□□□□ -0.42
LINC01561-202ENST00000623529 FLAD1Q8NFF5 587 aa12.4□□□□□ -0.42
LINC01561-202ENST00000623529 KIF1BPQ96EK5 621 aa12.4□□□□□ -0.42
LINC01561-202ENST00000623529 PRR5LQ6MZQ0 368 aa12.39□□□□□ -0.43
LINC01561-202ENST00000623529 NLGN1Q8N2Q7 840 aa12.39□□□□□ -0.43
LINC01561-202ENST00000623529 SYT17Q9BSW7 474 aa12.39□□□□□ -0.43
LINC01561-202ENST00000623529 NYXQ9GZU5 481 aa12.39□□□□□ -0.43
LINC01561-202ENST00000623529 SALL3Q9BXA9 1300 aa12.39□□□□□ -0.43
LINC01561-202ENST00000623529 CEP350Q5VT06 3117 aa12.39□□□□□ -0.43
LINC01561-202ENST00000623529 EYA2O00167 538 aa12.39□□□□□ -0.43
LINC01561-202ENST00000623529 HMGB1P09429 215 aaKnown RBP12.39□□□□□ -0.43
LINC01561-202ENST00000623529 TFCP2Q12800 502 aa12.39□□□□□ -0.43
LINC01561-202ENST00000623529 SF3B3Q15393 1217 aaKnown RBP12.39□□□□□ -0.43
LINC01561-202ENST00000623529 HSP90AB4PQ58FF6 505 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms