RNA–Protein interactions for RNA: ENST00000623266.1

PCDHB9-202, Transcript of protocadherin beta 9, humanhuman

TSL 4

Gene PCDHB9, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-202ENST00000623266 DDX60Q8IY21 1712 aaKnown RBP11.9□□□□□ -0.5
PCDHB9-202ENST00000623266 MPNDQ8N594 471 aa11.9□□□□□ -0.5
PCDHB9-202ENST00000623266 PHAXQ9H814 394 aaKnown RBP11.9□□□□□ -0.5
PCDHB9-202ENST00000623266 DBF4Q9UBU7 674 aaPredicted RBP11.9□□□□□ -0.5
PCDHB9-202ENST00000623266 ZNRF3Q9ULT6 936 aa11.9□□□□□ -0.5
PCDHB9-202ENST00000623266 POLR2AP24928 1970 aaKnown RBP11.89□□□□□ -0.51
PCDHB9-202ENST00000623266 ELL2O00472 640 aaPredicted RBP11.89□□□□□ -0.51
PCDHB9-202ENST00000623266 FOXN1O15353 648 aa11.89□□□□□ -0.51
PCDHB9-202ENST00000623266 HOXB7P09629 217 aa11.89□□□□□ -0.51
PCDHB9-202ENST00000623266 GRAPQ13588 217 aa11.89□□□□□ -0.51
PCDHB9-202ENST00000623266 SF3B3Q15393 1217 aaKnown RBP11.89□□□□□ -0.51
PCDHB9-202ENST00000623266 CCDC184Q52MB2 194 aa11.89□□□□□ -0.51
PCDHB9-202ENST00000623266 USP50Q70EL3 339 aaPredicted RBP11.89□□□□□ -0.51
PCDHB9-202ENST00000623266 NIM1KQ8IY84 436 aa11.89□□□□□ -0.51
PCDHB9-202ENST00000623266 TNS4Q8IZW8 715 aa11.89□□□□□ -0.51
PCDHB9-202ENST00000623266 GRAPLQ8TC17 118 aaPredicted RBP11.89□□□□□ -0.51
PCDHB9-202ENST00000623266 CELF1Q92879 486 aaKnown RBP11.89□□□□□ -0.51
PCDHB9-202ENST00000623266 COL4A1P02462 1669 aa11.89□□□□□ -0.51
PCDHB9-202ENST00000623266 RASSF10A6NK89 507 aa11.88□□□□□ -0.51
PCDHB9-202ENST00000623266 YDJCA8MPS7 323 aa11.88□□□□□ -0.51
PCDHB9-202ENST00000623266 HIRAP54198 1017 aaPredicted RBP11.88□□□□□ -0.51
PCDHB9-202ENST00000623266 KIAA2012Q0VF49 1180 aa11.88□□□□□ -0.51
PCDHB9-202ENST00000623266 RTL5Q5HYW3 569 aaPredicted RBP11.88□□□□□ -0.51
PCDHB9-202ENST00000623266 DPP8Q6V1X1 898 aaPredicted RBP11.88□□□□□ -0.51
PCDHB9-202ENST00000623266 C8orf58Q8NAV2 365 aa11.88□□□□□ -0.51
PCDHB9-202ENST00000623266 HYPKQ9NX55 129 aa11.88□□□□□ -0.51
PCDHB9-202ENST00000623266 WBP1LQ9NX94 342 aa11.88□□□□□ -0.51
PCDHB9-202ENST00000623266 GPRC5DQ9NZD1 345 aa11.88□□□□□ -0.51
PCDHB9-202ENST00000623266 PGAP2Q9UHJ9 254 aa11.88□□□□□ -0.51
PCDHB9-202ENST00000623266 TRPM7Q96QT4 1865 aa11.87□□□□□ -0.51
PCDHB9-202ENST00000623266 SHTN1A0MZ66 631 aa11.87□□□□□ -0.51
PCDHB9-202ENST00000623266 TRAF5O00463 557 aa11.87□□□□□ -0.51
PCDHB9-202ENST00000623266 RAD17O75943 681 aa11.87□□□□□ -0.51
PCDHB9-202ENST00000623266 SUPT20HQ8NEM7 779 aa11.87□□□□□ -0.51
PCDHB9-202ENST00000623266 KCNQ5Q9NR82 932 aa11.87□□□□□ -0.51
PCDHB9-202ENST00000623266 LMOD1P29536 600 aaPredicted RBP11.86□□□□□ -0.51
PCDHB9-202ENST00000623266 GMPSP49915 693 aaPredicted RBP11.86□□□□□ -0.51
PCDHB9-202ENST00000623266 CIAPIN1Q6FI81 312 aa11.86□□□□□ -0.51
PCDHB9-202ENST00000623266 JARID2Q92833 1246 aaPredicted RBP11.86□□□□□ -0.51
PCDHB9-202ENST00000623266 TMX4Q9H1E5 349 aaPredicted RBP11.86□□□□□ -0.51
PCDHB9-202ENST00000623266 ADARB2Q9NS39 739 aaKnown RBP11.86□□□□□ -0.51
PCDHB9-202ENST00000623266 POLLQ9UGP5 575 aa11.86□□□□□ -0.51
PCDHB9-202ENST00000623266 DUOX1Q9NRD9 1551 aa11.85□□□□□ -0.51
PCDHB9-202ENST00000623266 IRS4O14654 1257 aaPredicted RBP11.85□□□□□ -0.51
PCDHB9-202ENST00000623266 CAPN15O75808 1086 aa11.85□□□□□ -0.51
PCDHB9-202ENST00000623266 RPS8P62241 208 aaKnown RBP11.85□□□□□ -0.51
PCDHB9-202ENST00000623266 GNAI1P63096 354 aa11.85□□□□□ -0.51
PCDHB9-202ENST00000623266 TSPYL6Q8N831 410 aa11.85□□□□□ -0.51
PCDHB9-202ENST00000623266 SEC31BQ9NQW1 1179 aa11.85□□□□□ -0.51
PCDHB9-202ENST00000623266 IFT57Q9NWB7 429 aa11.85□□□□□ -0.51
PCDHB9-202ENST00000623266 CNOT7Q9UIV1 285 aaKnown RBP11.85□□□□□ -0.51
PCDHB9-202ENST00000623266 NSFL1CQ9UNZ2 370 aaKnown RBP11.85□□□□□ -0.51
PCDHB9-202ENST00000623266 WDR33Q9C0J8 1336 aaKnown RBP11.85□□□□□ -0.51
PCDHB9-202ENST00000623266 RIMBP2O15034 1052 aa11.84□□□□□ -0.51
PCDHB9-202ENST00000623266 GPSM2P81274 684 aa11.84□□□□□ -0.51
PCDHB9-202ENST00000623266 WASHC4Q2M389 1173 aa11.84□□□□□ -0.51
PCDHB9-202ENST00000623266 DLK2Q6UY11 383 aa11.84□□□□□ -0.51
PCDHB9-202ENST00000623266 TMC4Q7Z404 712 aa11.84□□□□□ -0.51
PCDHB9-202ENST00000623266 RIC3Q7Z5B4 369 aa11.84□□□□□ -0.51
PCDHB9-202ENST00000623266 ZBTB12Q9Y330 459 aaPredicted RBP11.84□□□□□ -0.51
PCDHB9-202ENST00000623266 LRRC37AA6NMS7 1700 aa11.83□□□□□ -0.52
PCDHB9-202ENST00000623266 TNIP1Q15025 636 aa11.83□□□□□ -0.52
PCDHB9-202ENST00000623266 ZBTB38Q8NAP3 1195 aaPredicted RBP11.83□□□□□ -0.52
PCDHB9-202ENST00000623266 TRPM4Q8TD43 1214 aa11.83□□□□□ -0.52
PCDHB9-202ENST00000623266 GPR101Q96P66 508 aaPredicted RBP11.83□□□□□ -0.52
PCDHB9-202ENST00000623266 MYD88Q99836 296 aa11.83□□□□□ -0.52
PCDHB9-202ENST00000623266 GLIS2Q9BZE0 524 aaPredicted RBP11.83□□□□□ -0.52
PCDHB9-202ENST00000623266 PRDM10Q9NQV6 1147 aa11.83□□□□□ -0.52
PCDHB9-202ENST00000623266 ABT1Q9ULW3 272 aaKnown RBP11.83□□□□□ -0.52
PCDHB9-202ENST00000623266 WTIPA6NIX2 430 aaPredicted RBP11.82□□□□□ -0.52
PCDHB9-202ENST00000623266 PSMD14O00487 310 aa11.82□□□□□ -0.52
PCDHB9-202ENST00000623266 EGFRP00533 1210 aa11.82□□□□□ -0.52
PCDHB9-202ENST00000623266 LBX1P52954 281 aa11.82□□□□□ -0.52
PCDHB9-202ENST00000623266 DOK7Q18PE1 504 aa11.82□□□□□ -0.52
PCDHB9-202ENST00000623266 CYP4F22Q6NT55 531 aa11.82□□□□□ -0.52
PCDHB9-202ENST00000623266 SAMD7Q7Z3H4 446 aa11.82□□□□□ -0.52
PCDHB9-202ENST00000623266 TBC1D16Q8TBP0 767 aa11.82□□□□□ -0.52
PCDHB9-202ENST00000623266 ZC3H15Q8WU90 426 aaKnown RBP11.82□□□□□ -0.52
PCDHB9-202ENST00000623266 METTL22Q9BUU2 404 aaPredicted RBP11.82□□□□□ -0.52
PCDHB9-202ENST00000623266 BCL2L13Q9BXK5 485 aa11.82□□□□□ -0.52
PCDHB9-202ENST00000623266 DBNDD1Q9H9R9 158 aa11.82□□□□□ -0.52
PCDHB9-202ENST00000623266 TLL2Q9Y6L7 1015 aa11.82□□□□□ -0.52
PCDHB9-202ENST00000623266 SCN9AQ15858 1988 aa11.81□□□□□ -0.52
PCDHB9-202ENST00000623266 C6orf229H3BNL8 230 aa11.81□□□□□ -0.52
PCDHB9-202ENST00000623266 PCCAP05165 728 aaPredicted RBP11.81□□□□□ -0.52
PCDHB9-202ENST00000623266 IGKV5-2P06315 115 aa11.81□□□□□ -0.52
PCDHB9-202ENST00000623266 CTCFP49711 727 aaPredicted RBP11.81□□□□□ -0.52
PCDHB9-202ENST00000623266 SAPCD2Q86UD0 394 aa11.81□□□□□ -0.52
PCDHB9-202ENST00000623266 CCDC191Q8NCU4 936 aa11.81□□□□□ -0.52
PCDHB9-202ENST00000623266 DPF2Q92785 391 aa11.81□□□□□ -0.52
PCDHB9-202ENST00000623266 CAPNS2Q96L46 248 aa11.81□□□□□ -0.52
PCDHB9-202ENST00000623266 PODXL2Q9NZ53 605 aa11.81□□□□□ -0.52
PCDHB9-202ENST00000623266 PDE8AO60658 829 aa11.8□□□□□ -0.52
PCDHB9-202ENST00000623266 AOC2O75106 756 aa11.8□□□□□ -0.52
PCDHB9-202ENST00000623266 HSPA8P11142 646 aaKnown RBP11.8□□□□□ -0.52
PCDHB9-202ENST00000623266 G2E3Q7L622 706 aa11.8□□□□□ -0.52
PCDHB9-202ENST00000623266 USP48Q86UV5 1035 aa11.8□□□□□ -0.52
PCDHB9-202ENST00000623266 RTL9Q8NET4 1388 aa11.79□□□□□ -0.52
PCDHB9-202ENST00000623266 PI4KAP2A4QPH2 592 aa11.79□□□□□ -0.52
PCDHB9-202ENST00000623266 H7C1D1 291 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms