RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 CPSF1Q10570 1443 aaKnown RBP10.82□□□□□ -0.68
HDAC9-229ENST00000622668 TULP4Q9NRJ4 1543 aa10.81□□□□□ -0.68
HDAC9-229ENST00000622668 VPS37CA5D8V6 355 aaPredicted RBP10.81□□□□□ -0.68
HDAC9-229ENST00000622668 GIGYF2Q6Y7W6 1299 aaKnown RBP10.81□□□□□ -0.68
HDAC9-229ENST00000622668 KIAA0825Q8IV33 1275 aa10.81□□□□□ -0.68
HDAC9-229ENST00000622668 RNF181Q9P0P0 153 aa10.81□□□□□ -0.68
HDAC9-229ENST00000622668 TMEM132AQ24JP5 1023 aa10.81□□□□□ -0.68
HDAC9-229ENST00000622668 USP19O94966 1318 aa10.81□□□□□ -0.68
HDAC9-229ENST00000622668 TIMM10P62072 90 aa10.81□□□□□ -0.68
HDAC9-229ENST00000622668 CCDC93Q567U6 631 aa10.81□□□□□ -0.68
HDAC9-229ENST00000622668 C20orf194Q5TEA3 1177 aa10.81□□□□□ -0.68
HDAC9-229ENST00000622668 TSHZ3Q63HK5 1081 aa10.81□□□□□ -0.68
HDAC9-229ENST00000622668 RHPN1Q8TCX5 695 aa10.81□□□□□ -0.68
HDAC9-229ENST00000622668 TRIM35Q9UPQ4 493 aa10.81□□□□□ -0.68
HDAC9-229ENST00000622668 KIF24Q5T7B8 1368 aa10.81□□□□□ -0.68
HDAC9-229ENST00000622668 CPS1P31327 1500 aa10.81□□□□□ -0.68
HDAC9-229ENST00000622668 TSPY2A6NKD2 308 aa10.81□□□□□ -0.68
HDAC9-229ENST00000622668 GCKRQ14397 625 aa10.81□□□□□ -0.68
HDAC9-229ENST00000622668 IQCA1Q86XH1 822 aa10.81□□□□□ -0.68
HDAC9-229ENST00000622668 SLC15A2Q16348 729 aa10.8□□□□□ -0.68
HDAC9-229ENST00000622668 SLC9C2Q5TAH2 1124 aa10.8□□□□□ -0.68
HDAC9-229ENST00000622668 RAD17O75943 681 aa10.8□□□□□ -0.68
HDAC9-229ENST00000622668 SSH2Q76I76 1423 aa10.8□□□□□ -0.68
HDAC9-229ENST00000622668 MIGA1Q8NAN2 632 aa10.8□□□□□ -0.68
HDAC9-229ENST00000622668 UNC13BO14795 1591 aa10.8□□□□□ -0.68
HDAC9-229ENST00000622668 NCOA3Q9Y6Q9 1424 aa10.8□□□□□ -0.68
HDAC9-229ENST00000622668 TAOK3Q9H2K8 898 aa10.8□□□□□ -0.68
HDAC9-229ENST00000622668 TECPR2O15040 1411 aa10.79□□□□□ -0.68
HDAC9-229ENST00000622668 L1TD1Q5T7N2 865 aaKnown RBP10.79□□□□□ -0.68
HDAC9-229ENST00000622668 POTEAQ6S8J7 498 aa10.79□□□□□ -0.68
HDAC9-229ENST00000622668 CCDC82Q8N4S0 544 aa10.79□□□□□ -0.68
HDAC9-229ENST00000622668 DCPSQ96C86 337 aaKnown RBP10.79□□□□□ -0.68
HDAC9-229ENST00000622668 ABT1Q9ULW3 272 aaKnown RBP10.79□□□□□ -0.68
HDAC9-229ENST00000622668 SPHKAPQ2M3C7 1700 aa10.79□□□□□ -0.68
HDAC9-229ENST00000622668 MST1RQ04912 1400 aa10.79□□□□□ -0.68
HDAC9-229ENST00000622668 EYA2O00167 538 aa10.79□□□□□ -0.68
HDAC9-229ENST00000622668 PPEF1O14829 653 aaPredicted RBP10.79□□□□□ -0.68
HDAC9-229ENST00000622668 TRIM22Q8IYM9 498 aa10.79□□□□□ -0.68
HDAC9-229ENST00000622668 SOS1Q07889 1333 aaPredicted RBP10.79□□□□□ -0.68
HDAC9-229ENST00000622668 ERBB4Q15303 1308 aa10.79□□□□□ -0.68
HDAC9-229ENST00000622668 ADRA2BP18089 450 aa10.79□□□□□ -0.68
HDAC9-229ENST00000622668 PROSER3Q2NL68 480 aa10.79□□□□□ -0.68
HDAC9-229ENST00000622668 ARHGAP45Q92619 1136 aa10.79□□□□□ -0.68
HDAC9-229ENST00000622668 ZNF76P36508 570 aa10.78□□□□□ -0.68
HDAC9-229ENST00000622668 TCP10Q12799 353 aa10.78□□□□□ -0.68
HDAC9-229ENST00000622668 STK3Q13188 491 aa10.78□□□□□ -0.68
HDAC9-229ENST00000622668 NARFQ9UHQ1 456 aa10.78□□□□□ -0.68
HDAC9-229ENST00000622668 A0A0G2JLW4 131 aa10.78□□□□□ -0.68
HDAC9-229ENST00000622668 HAND2P61296 217 aa10.78□□□□□ -0.68
HDAC9-229ENST00000622668 PDE4BQ07343 736 aa10.78□□□□□ -0.68
HDAC9-229ENST00000622668 TFCP2Q12800 502 aa10.78□□□□□ -0.68
HDAC9-229ENST00000622668 PLS1Q14651 629 aa10.78□□□□□ -0.68
HDAC9-229ENST00000622668 TTLL5Q6EMB2 1281 aa10.78□□□□□ -0.68
HDAC9-229ENST00000622668 DBNDD1Q9H9R9 158 aa10.78□□□□□ -0.68
HDAC9-229ENST00000622668 SMC3Q9UQE7 1217 aa10.78□□□□□ -0.68
HDAC9-229ENST00000622668 E9PCH4 1651 aa10.78□□□□□ -0.68
HDAC9-229ENST00000622668 SPATA31D1Q6ZQQ2 1576 aa10.78□□□□□ -0.68
HDAC9-229ENST00000622668 HEG1Q9ULI3 1381 aa10.78□□□□□ -0.68
HDAC9-229ENST00000622668 ZNF213O14771 459 aa10.78□□□□□ -0.68
HDAC9-229ENST00000622668 NEK4P51957 841 aa10.78□□□□□ -0.68
HDAC9-229ENST00000622668 PLCG2P16885 1265 aa10.78□□□□□ -0.68
HDAC9-229ENST00000622668 MFSD14BQ5SR56 506 aa10.78□□□□□ -0.68
HDAC9-229ENST00000622668 MCM9Q9NXL9 1143 aa10.78□□□□□ -0.68
HDAC9-229ENST00000622668 R3HCC1Q9Y3T6 440 aaKnown RBP10.78□□□□□ -0.68
HDAC9-229ENST00000622668 U3KPZ7 1027 aaPredicted RBP10.78□□□□□ -0.68
HDAC9-229ENST00000622668 GRIN3BO60391 1043 aa10.77□□□□□ -0.68
HDAC9-229ENST00000622668 SSFA2P28290 1259 aa10.77□□□□□ -0.68
HDAC9-229ENST00000622668 TNIP1Q15025 636 aa10.77□□□□□ -0.68
HDAC9-229ENST00000622668 PUM3Q15397 648 aaKnown RBP10.77□□□□□ -0.68
HDAC9-229ENST00000622668 TEX11Q8IYF3 940 aa10.77□□□□□ -0.68
HDAC9-229ENST00000622668 VAT1LQ9HCJ6 419 aa10.77□□□□□ -0.68
HDAC9-229ENST00000622668 PICK1Q9NRD5 415 aa10.77□□□□□ -0.68
HDAC9-229ENST00000622668 TTF2Q9UNY4 1162 aaKnown RBP10.77□□□□□ -0.68
HDAC9-229ENST00000622668 NBPF7P0C2Y1 421 aaPredicted RBP10.77□□□□□ -0.69
HDAC9-229ENST00000622668 CTSWP56202 376 aa10.77□□□□□ -0.69
HDAC9-229ENST00000622668 BLOC1S2Q6QNY1 142 aa10.77□□□□□ -0.69
HDAC9-229ENST00000622668 VSIG10Q8N0Z9 540 aa10.77□□□□□ -0.69
HDAC9-229ENST00000622668 VTI1AQ96AJ9 217 aa10.77□□□□□ -0.69
HDAC9-229ENST00000622668 DCCP43146 1447 aa10.77□□□□□ -0.69
HDAC9-229ENST00000622668 PTMAP06454 111 aaKnown RBP10.77□□□□□ -0.69
HDAC9-229ENST00000622668 ZBTB38Q8NAP3 1195 aaPredicted RBP10.77□□□□□ -0.69
HDAC9-229ENST00000622668 DENND2AQ9ULE3 1009 aa10.77□□□□□ -0.69
HDAC9-229ENST00000622668 SLC4A4Q9Y6R1 1079 aa10.77□□□□□ -0.69
HDAC9-229ENST00000622668 A0A1B0GUL7 405 aa10.76□□□□□ -0.69
HDAC9-229ENST00000622668 BBOX1O75936 387 aa10.76□□□□□ -0.69
HDAC9-229ENST00000622668 NPR1P16066 1061 aa10.76□□□□□ -0.69
HDAC9-229ENST00000622668 CHRNA5P30532 468 aa10.76□□□□□ -0.69
HDAC9-229ENST00000622668 MASTLQ96GX5 879 aa10.76□□□□□ -0.69
HDAC9-229ENST00000622668 RNF41Q9H4P4 317 aaPredicted RBP10.76□□□□□ -0.69
HDAC9-229ENST00000622668 NEURL1BA8MQ27 555 aa10.76□□□□□ -0.69
HDAC9-229ENST00000622668 PES1O00541 588 aaKnown RBP10.76□□□□□ -0.69
HDAC9-229ENST00000622668 ATP2B4P23634 1241 aa10.76□□□□□ -0.69
HDAC9-229ENST00000622668 SCNN1DP51172 638 aa10.76□□□□□ -0.69
HDAC9-229ENST00000622668 ATP8B2P98198 1209 aa10.76□□□□□ -0.69
HDAC9-229ENST00000622668 CTCFLQ8NI51 663 aaPredicted RBP10.76□□□□□ -0.69
HDAC9-229ENST00000622668 WDR66Q8TBY9 1149 aa10.76□□□□□ -0.69
HDAC9-229ENST00000622668 SUCLG2Q96I99 432 aa10.75□□□□□ -0.69
HDAC9-229ENST00000622668 GPBP1L1Q9HC44 474 aaPredicted RBP10.75□□□□□ -0.69
HDAC9-229ENST00000622668 SEC63Q9UGP8 760 aaKnown RBP10.75□□□□□ -0.69
HDAC9-229ENST00000622668 FRMPD1Q5SYB0 1578 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms