RNA–Protein interactions for RNA: ENST00000622320.4

RRP12-215, Transcript of ribosomal RNA processing 12 homolog, human

TSL 4

Gene RRP12, Length 543 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RRP12-215	ENST00000622320	LRRC37A	A6NMS7	1700 aa		13.83	□□□□□ -0.2
RRP12-215	ENST00000622320	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.83	□□□□□ -0.2
RRP12-215	ENST00000622320	PAPPA2	Q9BXP8	1791 aa		13.83	□□□□□ -0.2
RRP12-215	ENST00000622320	POLR2A	P24928	1970 aa	Known RBP	13.82	□□□□□ -0.2
RRP12-215	ENST00000622320	GPT	P24298	496 aa		13.82	□□□□□ -0.2
RRP12-215	ENST00000622320	RASAL3	Q86YV0	1011 aa		13.82	□□□□□ -0.2
RRP12-215	ENST00000622320	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.82	□□□□□ -0.2
RRP12-215	ENST00000622320	YDJC	A8MPS7	323 aa		13.81	□□□□□ -0.2
RRP12-215	ENST00000622320	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.81	□□□□□ -0.2
RRP12-215	ENST00000622320	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.81	□□□□□ -0.2
RRP12-215	ENST00000622320	DPP8	Q6V1X1	898 aa	Predicted RBP	13.81	□□□□□ -0.2
RRP12-215	ENST00000622320	SAMD7	Q7Z3H4	446 aa		13.81	□□□□□ -0.2
RRP12-215	ENST00000622320	ABCC4	O15439	1325 aa		13.81	□□□□□ -0.2
RRP12-215	ENST00000622320	MAP3K15	Q6ZN16	1313 aa		13.81	□□□□□ -0.2
RRP12-215	ENST00000622320	U2SURP	O15042	1029 aa	Known RBP	13.8	□□□□□ -0.2
RRP12-215	ENST00000622320	NTSR2	O95665	410 aa		13.8	□□□□□ -0.2
RRP12-215	ENST00000622320	EGFR	P00533	1210 aa		13.8	□□□□□ -0.2
RRP12-215	ENST00000622320	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.8	□□□□□ -0.2
RRP12-215	ENST00000622320	REM2	Q8IYK8	340 aa	Predicted RBP	13.8	□□□□□ -0.2
RRP12-215	ENST00000622320	DCPS	Q96C86	337 aa	Known RBP	13.8	□□□□□ -0.2
RRP12-215	ENST00000622320	ANKRD36C	Q5JPF3	1778 aa		13.8	□□□□□ -0.2
RRP12-215	ENST00000622320	ERVV-1	B6SEH8	477 aa		13.79	□□□□□ -0.2
RRP12-215	ENST00000622320	SUSD4	Q5VX71	490 aa		13.79	□□□□□ -0.2
RRP12-215	ENST00000622320	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.79	□□□□□ -0.2
RRP12-215	ENST00000622320	KIF6	Q6ZMV9	814 aa		13.78	□□□□□ -0.2
RRP12-215	ENST00000622320	MPND	Q8N594	471 aa		13.78	□□□□□ -0.2
RRP12-215	ENST00000622320	NGEF	Q8N5V2	710 aa		13.78	□□□□□ -0.2
RRP12-215	ENST00000622320	DPF2	Q92785	391 aa		13.78	□□□□□ -0.2
RRP12-215	ENST00000622320	GGA3	Q9NZ52	723 aa		13.78	□□□□□ -0.2
RRP12-215	ENST00000622320	KDM3B	Q7LBC6	1761 aa		13.78	□□□□□ -0.2
RRP12-215	ENST00000622320	PSMD14	O00487	310 aa		13.77	□□□□□ -0.21
RRP12-215	ENST00000622320	TBC1D8	O95759	1140 aa		13.77	□□□□□ -0.21
RRP12-215	ENST00000622320	TTLL7	Q6ZT98	887 aa		13.77	□□□□□ -0.21
RRP12-215	ENST00000622320	SULF1	Q8IWU6	871 aa		13.77	□□□□□ -0.21
RRP12-215	ENST00000622320	CDCA5	Q96FF9	252 aa		13.77	□□□□□ -0.21
RRP12-215	ENST00000622320	ZBTB3	Q9H5J0	574 aa		13.77	□□□□□ -0.21
RRP12-215	ENST00000622320	KIF4B	Q2VIQ3	1234 aa		13.76	□□□□□ -0.21
RRP12-215	ENST00000622320	NLRP3	Q96P20	1036 aa		13.76	□□□□□ -0.21
RRP12-215	ENST00000622320	GPR25	O00155	361 aa		13.75	□□□□□ -0.21
RRP12-215	ENST00000622320	NOM1	Q5C9Z4	860 aa	Known RBP	13.75	□□□□□ -0.21
RRP12-215	ENST00000622320	RBM26	Q5T8P6	1007 aa	Known RBP	13.75	□□□□□ -0.21
RRP12-215	ENST00000622320	MCM10	Q7L590	875 aa		13.75	□□□□□ -0.21
RRP12-215	ENST00000622320	SP8	Q8IXZ3	490 aa		13.75	□□□□□ -0.21
RRP12-215	ENST00000622320	ZNF34	Q8IZ26	560 aa		13.75	□□□□□ -0.21
RRP12-215	ENST00000622320	PHACTR3	Q96KR7	559 aa		13.75	□□□□□ -0.21
RRP12-215	ENST00000622320	TAF1	P21675	1872 aa		13.75	□□□□□ -0.21
RRP12-215	ENST00000622320	ASTN2	O75129	1339 aa	Predicted RBP	13.74	□□□□□ -0.21
RRP12-215	ENST00000622320	POTEF	A5A3E0	1075 aa		13.74	□□□□□ -0.21
RRP12-215	ENST00000622320	RPS12	P25398	132 aa	Known RBP	13.74	□□□□□ -0.21
RRP12-215	ENST00000622320	PRKAR2B	P31323	418 aa		13.74	□□□□□ -0.21
RRP12-215	ENST00000622320	PPP1R42	Q7Z4L9	355 aa		13.74	□□□□□ -0.21
RRP12-215	ENST00000622320	RTF1	Q92541	710 aa	Known RBP	13.74	□□□□□ -0.21
RRP12-215	ENST00000622320	MKI67	P46013	3256 aa	Known RBP	13.74	□□□□□ -0.21
RRP12-215	ENST00000622320	RTL9	Q8NET4	1388 aa		13.73	□□□□□ -0.21
RRP12-215	ENST00000622320	BBOX1	O75936	387 aa		13.73	□□□□□ -0.21
RRP12-215	ENST00000622320	FKBP1B	P68106	108 aa		13.73	□□□□□ -0.21
RRP12-215	ENST00000622320	PARP10	Q53GL7	1025 aa		13.73	□□□□□ -0.21
RRP12-215	ENST00000622320	DBNDD1	Q9H9R9	158 aa		13.73	□□□□□ -0.21
RRP12-215	ENST00000622320	SCN9A	Q15858	1988 aa		13.72	□□□□□ -0.21
RRP12-215	ENST00000622320	PER1	O15534	1290 aa	Predicted RBP	13.72	□□□□□ -0.21
RRP12-215	ENST00000622320	FKTN	O75072	461 aa		13.72	□□□□□ -0.21
RRP12-215	ENST00000622320	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.72	□□□□□ -0.21
RRP12-215	ENST00000622320	RSPH6A	Q9H0K4	717 aa		13.72	□□□□□ -0.21
RRP12-215	ENST00000622320	RRP7A	Q9Y3A4	280 aa	Known RBP	13.72	□□□□□ -0.21
RRP12-215	ENST00000622320	HTT	P42858	3142 aa		13.72	□□□□□ -0.21
RRP12-215	ENST00000622320	MYL6B	P14649	208 aa		13.71	□□□□□ -0.21
RRP12-215	ENST00000622320	GRAP	Q13588	217 aa		13.71	□□□□□ -0.21
RRP12-215	ENST00000622320	DCTN1	Q14203	1278 aa		13.71	□□□□□ -0.21
RRP12-215	ENST00000622320	GRAPL	Q8TC17	118 aa	Predicted RBP	13.71	□□□□□ -0.21
RRP12-215	ENST00000622320	PSME4	Q14997	1843 aa		13.71	□□□□□ -0.22
RRP12-215	ENST00000622320	ECE2	O60344	883 aa		13.7	□□□□□ -0.22
RRP12-215	ENST00000622320	WASHC4	Q2M389	1173 aa		13.7	□□□□□ -0.22
RRP12-215	ENST00000622320	SLC10A5	Q5PT55	438 aa		13.7	□□□□□ -0.22
RRP12-215	ENST00000622320	CC2D1B	Q5T0F9	858 aa	Known RBP	13.7	□□□□□ -0.22
RRP12-215	ENST00000622320	UTP14A	Q9BVJ6	771 aa	Known RBP	13.7	□□□□□ -0.22
RRP12-215	ENST00000622320	COLQ	Q9Y215	455 aa	Predicted RBP	13.7	□□□□□ -0.22
RRP12-215	ENST00000622320	DLL1	O00548	723 aa		13.69	□□□□□ -0.22
RRP12-215	ENST00000622320	ANGEL2	Q5VTE6	544 aa	Known RBP	13.69	□□□□□ -0.22
RRP12-215	ENST00000622320	INTS3	Q68E01	1043 aa	Known RBP	13.69	□□□□□ -0.22
RRP12-215	ENST00000622320	MOB2	Q70IA6	237 aa		13.69	□□□□□ -0.22
RRP12-215	ENST00000622320	DDX46	Q7L014	1031 aa	Known RBP	13.69	□□□□□ -0.22
RRP12-215	ENST00000622320	TMC4	Q7Z404	712 aa		13.69	□□□□□ -0.22
RRP12-215	ENST00000622320	CFHR5	Q9BXR6	569 aa		13.69	□□□□□ -0.22
RRP12-215	ENST00000622320	ZNF609	O15014	1411 aa		13.69	□□□□□ -0.22
RRP12-215	ENST00000622320	COL4A1	P02462	1669 aa		13.69	□□□□□ -0.22
RRP12-215	ENST00000622320	RIMBP2	O15034	1052 aa		13.68	□□□□□ -0.22
RRP12-215	ENST00000622320	HCLS1	P14317	486 aa	Predicted RBP	13.68	□□□□□ -0.22
RRP12-215	ENST00000622320	TM4SF4	P48230	202 aa		13.68	□□□□□ -0.22
RRP12-215	ENST00000622320	SREBF2	Q12772	1141 aa		13.68	□□□□□ -0.22
RRP12-215	ENST00000622320	KCNQ5	Q9NR82	932 aa		13.68	□□□□□ -0.22
RRP12-215	ENST00000622320	TRIM17	Q9Y577	477 aa		13.68	□□□□□ -0.22
RRP12-215	ENST00000622320	TRIOBP	Q9H2D6	2365 aa		13.68	□□□□□ -0.22
RRP12-215	ENST00000622320	KIAA0100	Q14667	2235 aa	Known RBP	13.67	□□□□□ -0.22
RRP12-215	ENST00000622320	UBE2Q2L	H0YL09	131 aa		13.67	□□□□□ -0.22
RRP12-215	ENST00000622320	ZEB1	P37275	1124 aa	Predicted RBP	13.67	□□□□□ -0.22
RRP12-215	ENST00000622320	MKRN3	Q13064	507 aa	Known RBP	13.67	□□□□□ -0.22
RRP12-215	ENST00000622320	TAF7	Q15545	349 aa	Predicted RBP	13.67	□□□□□ -0.22
RRP12-215	ENST00000622320	R3HDML	Q9H3Y0	253 aa		13.67	□□□□□ -0.22
RRP12-215	ENST00000622320	MIS18A	Q9NYP9	233 aa		13.67	□□□□□ -0.22
RRP12-215	ENST00000622320	LAMB1	P07942	1786 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms