RNA–Protein interactions for RNA: ENST00000622176.4

SLC6A6-209, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best)

Gene SLC6A6, Length 1,116 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-209ENST00000622176 GNAI3P08754 354 aa21.97■■□□□ 1.11
SLC6A6-209ENST00000622176 UBTFL1P0CB47 393 aaPredicted RBP21.97■■□□□ 1.11
SLC6A6-209ENST00000622176 FOXO4P98177 505 aa21.97■■□□□ 1.11
SLC6A6-209ENST00000622176 MVPQ14764 893 aaKnown RBP21.97■■□□□ 1.11
SLC6A6-209ENST00000622176 TTLL11Q8NHH1 800 aa21.97■■□□□ 1.11
SLC6A6-209ENST00000622176 RPGRQ92834 1020 aaKnown RBP21.97■■□□□ 1.11
SLC6A6-209ENST00000622176 ZNF622Q969S3 477 aaKnown RBP eCLIP21.97■■□□□ 1.11
SLC6A6-209ENST00000622176 PIM2Q9P1W9 311 aa21.97■■□□□ 1.11
SLC6A6-209ENST00000622176 ZBTB7BO15156 539 aaPredicted RBP21.96■■□□□ 1.11
SLC6A6-209ENST00000622176 CCDC152Q4G0S7 254 aa21.96■■□□□ 1.11
SLC6A6-209ENST00000622176 EPHA10Q5JZY3 1008 aa21.96■■□□□ 1.11
SLC6A6-209ENST00000622176 CNKSR1Q969H4 720 aa21.96■■□□□ 1.11
SLC6A6-209ENST00000622176 RBM17Q96I25 401 aaKnown RBP21.96■■□□□ 1.11
SLC6A6-209ENST00000622176 CRAMP1Q96RY5 1269 aa21.96■■□□□ 1.11
SLC6A6-209ENST00000622176 HDAC5Q9UQL6 1122 aa21.96■■□□□ 1.11
SLC6A6-209ENST00000622176 COG6Q9Y2V7 657 aa21.96■■□□□ 1.11
SLC6A6-209ENST00000622176 SUPT16HQ9Y5B9 1047 aaKnown RBP21.96■■□□□ 1.11
SLC6A6-209ENST00000622176 RTL9Q8NET4 1388 aa21.95■■□□□ 1.1
SLC6A6-209ENST00000622176 DLEC1Q9Y238 1755 aa21.94■■□□□ 1.1
SLC6A6-209ENST00000622176 ALDH1B1P30837 517 aa21.94■■□□□ 1.1
SLC6A6-209ENST00000622176 GPR162Q16538 588 aa21.94■■□□□ 1.1
SLC6A6-209ENST00000622176 RABL6Q3YEC7 729 aaPredicted RBP21.94■■□□□ 1.1
SLC6A6-209ENST00000622176 DDX46Q7L014 1031 aaKnown RBP21.94■■□□□ 1.1
SLC6A6-209ENST00000622176 TTLL6Q8N841 843 aa21.94■■□□□ 1.1
SLC6A6-209ENST00000622176 DDX19BQ9UMR2 479 aa21.94■■□□□ 1.1
SLC6A6-209ENST00000622176 DALRD3Q5D0E6 543 aaKnown RBP21.93■■□□□ 1.1
SLC6A6-209ENST00000622176 ANKRD44Q8N8A2 993 aa21.93■■□□□ 1.1
SLC6A6-209ENST00000622176 BICC1Q9H694 974 aaKnown RBP21.93■■□□□ 1.1
SLC6A6-209ENST00000622176 LMBR1LQ6UX01 489 aa21.92■■□□□ 1.1
SLC6A6-209ENST00000622176 PELP1Q8IZL8 1130 aaKnown RBP21.92■■□□□ 1.1
SLC6A6-209ENST00000622176 CCDC85AQ96PX6 553 aaPredicted RBP21.92■■□□□ 1.1
SLC6A6-209ENST00000622176 GREM2Q9H772 168 aa21.92■■□□□ 1.1
SLC6A6-209ENST00000622176 BRCA1P38398 1863 aaKnown RBP21.92■■□□□ 1.1
SLC6A6-209ENST00000622176 MYH3P11055 1940 aa21.91■■□□□ 1.1
SLC6A6-209ENST00000622176 GNAI2P04899 355 aa21.91■■□□□ 1.1
SLC6A6-209ENST00000622176 GRAPQ13588 217 aa21.91■■□□□ 1.1
SLC6A6-209ENST00000622176 PRPF40BQ6NWY9 871 aaKnown RBP21.91■■□□□ 1.1
SLC6A6-209ENST00000622176 GRAPLQ8TC17 118 aaPredicted RBP21.91■■□□□ 1.1
SLC6A6-209ENST00000622176 LRRFIP2Q9Y608 721 aaKnown RBP21.91■■□□□ 1.1
SLC6A6-209ENST00000622176 FAM161AQ3B820 660 aa21.9■■□□□ 1.1
SLC6A6-209ENST00000622176 CHMP4BQ9H444 224 aaKnown RBP21.9■■□□□ 1.1
SLC6A6-209ENST00000622176 SEC31BQ9NQW1 1179 aa21.9■■□□□ 1.1
SLC6A6-209ENST00000622176 BBOX1O75936 387 aa21.89■■□□□ 1.09
SLC6A6-209ENST00000622176 CENPBP07199 599 aaPredicted RBP21.89■■□□□ 1.09
SLC6A6-209ENST00000622176 WWC3Q9ULE0 1092 aa21.89■■□□□ 1.09
SLC6A6-209ENST00000622176 BCS1LQ9Y276 419 aa21.89■■□□□ 1.09
SLC6A6-209ENST00000622176 ITGA6P23229 1130 aa21.88■■□□□ 1.09
SLC6A6-209ENST00000622176 C7orf43Q8WVR3 580 aa21.88■■□□□ 1.09
SLC6A6-209ENST00000622176 CELF1Q92879 486 aaKnown RBP21.88■■□□□ 1.09
SLC6A6-209ENST00000622176 ZBTB40Q9NUA8 1239 aa21.88■■□□□ 1.09
SLC6A6-209ENST00000622176 RPS8P62241 208 aaKnown RBP21.87■■□□□ 1.09
SLC6A6-209ENST00000622176 IFIT5Q13325 482 aaKnown RBP21.87■■□□□ 1.09
SLC6A6-209ENST00000622176 CDC5LQ99459 802 aaKnown RBP21.87■■□□□ 1.09
SLC6A6-209ENST00000622176 CHMP3Q9Y3E7 222 aa21.87■■□□□ 1.09
SLC6A6-209ENST00000622176 SLX4Q8IY92 1834 aa21.86■■□□□ 1.09
SLC6A6-209ENST00000622176 ANKRD18BA2A2Z9 1011 aa21.86■■□□□ 1.09
SLC6A6-209ENST00000622176 YBX3P16989 372 aaKnown RBP eCLIP21.86■■□□□ 1.095e-11■■■□□ 18.9
SLC6A6-209ENST00000622176 MTX1Q13505 466 aa21.86■■□□□ 1.09
SLC6A6-209ENST00000622176 TMC4Q7Z404 712 aa21.86■■□□□ 1.09
SLC6A6-209ENST00000622176 PPEF1O14829 653 aaPredicted RBP21.85■■□□□ 1.09
SLC6A6-209ENST00000622176 CCDC57Q2TAC2 916 aa21.85■■□□□ 1.09
SLC6A6-209ENST00000622176 ANKRD18AQ8IVF6 992 aa21.85■■□□□ 1.09
SLC6A6-209ENST00000622176 CRBNQ96SW2 442 aa21.84■■□□□ 1.09
SLC6A6-209ENST00000622176 C1orf115Q9H7X2 142 aa21.84■■□□□ 1.09
SLC6A6-209ENST00000622176 ATP6V0A2Q9Y487 856 aa21.84■■□□□ 1.09
SLC6A6-209ENST00000622176 COL4A1P02462 1669 aa21.84■■□□□ 1.09
SLC6A6-209ENST00000622176 TAF1P21675 1872 aa21.83■■□□□ 1.09
SLC6A6-209ENST00000622176 C21orf2O43822 256 aa21.83■■□□□ 1.09
SLC6A6-209ENST00000622176 SOGA3Q5TF21 947 aa21.83■■□□□ 1.09
SLC6A6-209ENST00000622176 CC2D2BQ6DHV5 1058 aa21.83■■□□□ 1.09
SLC6A6-209ENST00000622176 SP8Q8IXZ3 490 aa21.83■■□□□ 1.09
SLC6A6-209ENST00000622176 IGHMBP2P38935 993 aaKnown RBP21.82■■□□□ 1.08
SLC6A6-209ENST00000622176 RFX5P48382 616 aaPredicted RBP21.82■■□□□ 1.08
SLC6A6-209ENST00000622176 BSDC1Q9NW68 430 aaPredicted RBP21.82■■□□□ 1.08
SLC6A6-209ENST00000622176 ARFGEF1Q9Y6D6 1849 aa21.82■■□□□ 1.08
SLC6A6-209ENST00000622176 GRIN3BO60391 1043 aa21.81■■□□□ 1.08
SLC6A6-209ENST00000622176 ATP8B2P98198 1209 aa21.81■■□□□ 1.08
SLC6A6-209ENST00000622176 ZNF784Q8NCA9 323 aaPredicted RBP21.81■■□□□ 1.08
SLC6A6-209ENST00000622176 ZNF219Q9P2Y4 722 aaPredicted RBP21.81■■□□□ 1.08
SLC6A6-209ENST00000622176 SRGAP3O43295 1099 aa21.8■■□□□ 1.08
SLC6A6-209ENST00000622176 GRIPAP1Q4V328 841 aa21.8■■□□□ 1.08
SLC6A6-209ENST00000622176 CCDC93Q567U6 631 aa21.8■■□□□ 1.08
SLC6A6-209ENST00000622176 TAF7LQ5H9L4 462 aa21.8■■□□□ 1.08
SLC6A6-209ENST00000622176 CEP85Q6P2H3 762 aa21.8■■□□□ 1.08
SLC6A6-209ENST00000622176 OLFM4Q6UX06 510 aa21.8■■□□□ 1.08
SLC6A6-209ENST00000622176 ZNF594Q96JF6 807 aaPredicted RBP21.8■■□□□ 1.08
SLC6A6-209ENST00000622176 MPHOSPH8Q99549 860 aa21.8■■□□□ 1.08
SLC6A6-209ENST00000622176 CACNA1SQ13698 1873 aa21.79■■□□□ 1.08
SLC6A6-209ENST00000622176 SLC51AQ86UW1 340 aa21.79■■□□□ 1.08
SLC6A6-209ENST00000622176 TMX4Q9H1E5 349 aaPredicted RBP21.79■■□□□ 1.08
SLC6A6-209ENST00000622176 SNED1Q8TER0 1413 aa21.79■■□□□ 1.08
SLC6A6-209ENST00000622176 PNMA6EA0A0J9YXQ4 647 aa21.78■■□□□ 1.08
SLC6A6-209ENST00000622176 PTPN12Q05209 780 aaKnown RBP21.78■■□□□ 1.08
SLC6A6-209ENST00000622176 RTKN2Q8IZC4 609 aa21.78■■□□□ 1.08
SLC6A6-209ENST00000622176 AAMPQ13685 434 aa21.77■■□□□ 1.08
SLC6A6-209ENST00000622176 POLA2Q14181 598 aa21.77■■□□□ 1.08
SLC6A6-209ENST00000622176 LDHAL6AQ6ZMR3 332 aa21.77■■□□□ 1.08
SLC6A6-209ENST00000622176 RPAP2Q8IXW5 612 aaPredicted RBP21.77■■□□□ 1.08
SLC6A6-209ENST00000622176 KLHDC4Q8TBB5 520 aa21.77■■□□□ 1.08
SLC6A6-209ENST00000622176 SSH3Q8TE77 659 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms