RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 CCT4P50991 539 aaKnown RBP8.79□□□□□ -1
TRIM49B-202ENST00000622138 PLCB2Q00722 1185 aa8.79□□□□□ -1
TRIM49B-202ENST00000622138 PTPN14Q15678 1187 aa8.79□□□□□ -1
TRIM49B-202ENST00000622138 LEKR1Q6ZMV7 388 aa8.79□□□□□ -1
TRIM49B-202ENST00000622138 CCDC186Q7Z3E2 898 aa8.79□□□□□ -1
TRIM49B-202ENST00000622138 NBPF11Q86T75 865 aa8.79□□□□□ -1
TRIM49B-202ENST00000622138 UNC5CLQ8IV45 518 aa8.79□□□□□ -1
TRIM49B-202ENST00000622138 JMYQ8N9B5 988 aa8.79□□□□□ -1
TRIM49B-202ENST00000622138 FAM200AQ8TCP9 573 aa8.79□□□□□ -1
TRIM49B-202ENST00000622138 SGSM3Q96HU1 749 aa8.79□□□□□ -1
TRIM49B-202ENST00000622138 ESYT1Q9BSJ8 1104 aa8.79□□□□□ -1
TRIM49B-202ENST00000622138 L2HGDHQ9H9P8 463 aa8.79□□□□□ -1
TRIM49B-202ENST00000622138 CCDC9Q9Y3X0 531 aaKnown RBP8.79□□□□□ -1
TRIM49B-202ENST00000622138 MARF1Q9Y4F3 1742 aaKnown RBP8.79□□□□□ -1
TRIM49B-202ENST00000622138 PLEKHG1Q9ULL1 1385 aa8.79□□□□□ -1
TRIM49B-202ENST00000622138 N4BP2Q86UW6 1770 aaPredicted RBP8.79□□□□□ -1
TRIM49B-202ENST00000622138 IRF6O14896 467 aa8.79□□□□□ -1
TRIM49B-202ENST00000622138 GNAI2P04899 355 aa8.79□□□□□ -1
TRIM49B-202ENST00000622138 OAS2P29728 719 aaKnown RBP8.79□□□□□ -1
TRIM49B-202ENST00000622138 ST5P78524 1137 aa8.79□□□□□ -1
TRIM49B-202ENST00000622138 FLIIQ13045 1269 aa8.79□□□□□ -1
TRIM49B-202ENST00000622138 C11orf91Q3C1V1 193 aa8.79□□□□□ -1
TRIM49B-202ENST00000622138 NOL8Q76FK4 1167 aaKnown RBP8.79□□□□□ -1
TRIM49B-202ENST00000622138 USP48Q86UV5 1035 aa8.79□□□□□ -1
TRIM49B-202ENST00000622138 RNF217Q8TC41 542 aa8.79□□□□□ -1
TRIM49B-202ENST00000622138 TBC1D22AQ8WUA7 517 aa8.79□□□□□ -1
TRIM49B-202ENST00000622138 TMX3Q96JJ7 454 aa8.79□□□□□ -1
TRIM49B-202ENST00000622138 DIP2AQ14689 1571 aa8.78□□□□□ -1
TRIM49B-202ENST00000622138 TUBB4AP04350 444 aa8.78□□□□□ -1
TRIM49B-202ENST00000622138 CCDC192P0DO97 292 aa8.78□□□□□ -1
TRIM49B-202ENST00000622138 NEK4P51957 841 aa8.78□□□□□ -1
TRIM49B-202ENST00000622138 CORO7P57737 925 aa8.78□□□□□ -1
TRIM49B-202ENST00000622138 ZRSR1Q15695 479 aaKnown RBP8.78□□□□□ -1
TRIM49B-202ENST00000622138 FAM43BQ6ZT52 329 aaPredicted RBP8.78□□□□□ -1
TRIM49B-202ENST00000622138 EFCAB13Q8IY85 973 aa8.78□□□□□ -1
TRIM49B-202ENST00000622138 ZSCAN16Q9H4T2 348 aaPredicted RBP8.78□□□□□ -1
TRIM49B-202ENST00000622138 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.78□□□□□ -1
TRIM49B-202ENST00000622138 EIF3CLB5ME19 914 aaKnown RBP8.78□□□□□ -1
TRIM49B-202ENST00000622138 TPM1P09493 284 aa8.78□□□□□ -1
TRIM49B-202ENST00000622138 USP8P40818 1118 aa8.78□□□□□ -1
TRIM49B-202ENST00000622138 ZKSCAN8Q15776 578 aaPredicted RBP8.78□□□□□ -1
TRIM49B-202ENST00000622138 PLA2G4DQ86XP0 818 aa8.78□□□□□ -1
TRIM49B-202ENST00000622138 ZNF592Q92610 1267 aa8.78□□□□□ -1
TRIM49B-202ENST00000622138 EIF3CQ99613 913 aaKnown RBP8.78□□□□□ -1
TRIM49B-202ENST00000622138 ESF1Q9H501 851 aaKnown RBP8.78□□□□□ -1
TRIM49B-202ENST00000622138 POLR3GO15318 223 aaPredicted RBP8.77□□□□□ -1.01
TRIM49B-202ENST00000622138 LIG1P18858 919 aa8.77□□□□□ -1.01
TRIM49B-202ENST00000622138 CHMLP26374 656 aa8.77□□□□□ -1.01
TRIM49B-202ENST00000622138 LRMPQ12912 555 aa8.77□□□□□ -1.01
TRIM49B-202ENST00000622138 REXO1L1PQ8IX06 675 aa8.77□□□□□ -1.01
TRIM49B-202ENST00000622138 LRRCC1Q9C099 1032 aa8.77□□□□□ -1.01
TRIM49B-202ENST00000622138 MKRN1Q9UHC7 482 aaKnown RBP8.77□□□□□ -1.01
TRIM49B-202ENST00000622138 KIF13AQ9H1H9 1805 aa8.77□□□□□ -1.01
TRIM49B-202ENST00000622138 KLHL33A6NCF5 533 aa8.76□□□□□ -1.01
TRIM49B-202ENST00000622138 TTC36A6NLP5 189 aa8.76□□□□□ -1.01
TRIM49B-202ENST00000622138 SEMA3FQ13275 785 aa8.76□□□□□ -1.01
TRIM49B-202ENST00000622138 NUTM2GQ5VZR2 741 aa8.76□□□□□ -1.01
TRIM49B-202ENST00000622138 STK31Q9BXU1 1019 aa8.76□□□□□ -1.01
TRIM49B-202ENST00000622138 SH3BP1Q9Y3L3 701 aa8.76□□□□□ -1.01
TRIM49B-202ENST00000622138 TTC21AQ8NDW8 1320 aa8.76□□□□□ -1.01
TRIM49B-202ENST00000622138 SGSM2O43147 1006 aa8.76□□□□□ -1.01
TRIM49B-202ENST00000622138 C21orf2O43822 256 aa8.76□□□□□ -1.01
TRIM49B-202ENST00000622138 AMPHP49418 695 aa8.76□□□□□ -1.01
TRIM49B-202ENST00000622138 ZNF75DP51815 510 aa8.76□□□□□ -1.01
TRIM49B-202ENST00000622138 HDGFP51858 240 aaKnown RBP8.76□□□□□ -1.01
TRIM49B-202ENST00000622138 ATP8B2P98198 1209 aa8.76□□□□□ -1.01
TRIM49B-202ENST00000622138 DNAJC21Q5F1R6 531 aaKnown RBP8.76□□□□□ -1.01
TRIM49B-202ENST00000622138 IL17REQ8NFR9 667 aa8.76□□□□□ -1.01
TRIM49B-202ENST00000622138 STAG1Q8WVM7 1258 aa8.76□□□□□ -1.01
TRIM49B-202ENST00000622138 RILPL2Q969X0 211 aa8.76□□□□□ -1.01
TRIM49B-202ENST00000622138 UPF3BQ9BZI7 483 aaKnown RBP8.76□□□□□ -1.01
TRIM49B-202ENST00000622138 FAM107BQ9H098 131 aa8.76□□□□□ -1.01
TRIM49B-202ENST00000622138 IL1RAPL2Q9NP60 686 aa8.76□□□□□ -1.01
TRIM49B-202ENST00000622138 ANO2Q9NQ90 1003 aa8.76□□□□□ -1.01
TRIM49B-202ENST00000622138 CEBPAP49715 358 aaPredicted RBP8.75□□□□□ -1.01
TRIM49B-202ENST00000622138 MAP9Q49MG5 647 aa8.75□□□□□ -1.01
TRIM49B-202ENST00000622138 NBPF6Q5VWK0 638 aa8.75□□□□□ -1.01
TRIM49B-202ENST00000622138 NBPF5PQ86XG9 351 aaPredicted RBP8.75□□□□□ -1.01
TRIM49B-202ENST00000622138 DRC7Q8IY82 874 aa8.75□□□□□ -1.01
TRIM49B-202ENST00000622138 NBPF4Q96M43 638 aa8.75□□□□□ -1.01
TRIM49B-202ENST00000622138 AMOTL2Q9Y2J4 779 aa8.75□□□□□ -1.01
TRIM49B-202ENST00000622138 MAP4K4O95819 1239 aaPredicted RBP8.75□□□□□ -1.01
TRIM49B-202ENST00000622138 LMAN1P49257 510 aa8.75□□□□□ -1.01
TRIM49B-202ENST00000622138 SMC1AQ14683 1233 aaKnown RBP8.75□□□□□ -1.01
TRIM49B-202ENST00000622138 E2F4Q16254 413 aa8.75□□□□□ -1.01
TRIM49B-202ENST00000622138 ERCC6LQ2NKX8 1250 aa8.75□□□□□ -1.01
TRIM49B-202ENST00000622138 ARHGAP29Q52LW3 1261 aa8.75□□□□□ -1.01
TRIM49B-202ENST00000622138 CCDC93Q567U6 631 aa8.75□□□□□ -1.01
TRIM49B-202ENST00000622138 NUTM1Q86Y26 1132 aa8.75□□□□□ -1.01
TRIM49B-202ENST00000622138 USHBP1Q8N6Y0 703 aa8.75□□□□□ -1.01
TRIM49B-202ENST00000622138 TDRD7Q8NHU6 1098 aaKnown RBP8.75□□□□□ -1.01
TRIM49B-202ENST00000622138 SRRTQ9BXP5 876 aaKnown RBP8.75□□□□□ -1.01
TRIM49B-202ENST00000622138 USP44Q9H0E7 712 aa8.75□□□□□ -1.01
TRIM49B-202ENST00000622138 PHAXQ9H814 394 aaKnown RBP8.75□□□□□ -1.01
TRIM49B-202ENST00000622138 STAP2Q9UGK3 403 aa8.75□□□□□ -1.01
TRIM49B-202ENST00000622138 MAP3K5Q99683 1374 aa8.75□□□□□ -1.01
TRIM49B-202ENST00000622138 PXDNLA1KZ92 1463 aa8.75□□□□□ -1.01
TRIM49B-202ENST00000622138 GNAT3A8MTJ3 354 aa8.74□□□□□ -1.01
TRIM49B-202ENST00000622138 GNAI3P08754 354 aa8.74□□□□□ -1.01
TRIM49B-202ENST00000622138 CASTP20810 708 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms