RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 BCL9LQ86UU0 1499 aa15.09■□□□□ 0.01
SCAMP1-207ENST00000621999 H0YIN7 160 aa15.09■□□□□ 0.01
SCAMP1-207ENST00000621999 HIP1O00291 1037 aa15.09■□□□□ 0.01
SCAMP1-207ENST00000621999 RPS8P62241 208 aaKnown RBP15.09■□□□□ 0.01
SCAMP1-207ENST00000621999 SLC4A9Q96Q91 983 aa15.09■□□□□ 0.01
SCAMP1-207ENST00000621999 FOXD4L1Q9NU39 408 aa15.09■□□□□ 0.01
SCAMP1-207ENST00000621999 INTS5Q6P9B9 1019 aaKnown RBP15.09■□□□□ 0.01
SCAMP1-207ENST00000621999 ILDR1Q86SU0 546 aaPredicted RBP15.09■□□□□ 0.01
SCAMP1-207ENST00000621999 SEC31BQ9NQW1 1179 aa15.09■□□□□ 0.01
SCAMP1-207ENST00000621999 RIMBP2O15034 1052 aa15.08■□□□□ 0.01
SCAMP1-207ENST00000621999 EPHA10Q5JZY3 1008 aa15.08■□□□□ 0.01
SCAMP1-207ENST00000621999 STK11IPQ8N1F8 1099 aa15.08■□□□□ 0.01
SCAMP1-207ENST00000621999 COL14A1Q05707 1796 aaKnown RBP15.08■□□□□ 0
SCAMP1-207ENST00000621999 A0A1B0GUL7 405 aa15.08■□□□□ 0
SCAMP1-207ENST00000621999 LRRC24Q50LG9 513 aa15.08■□□□□ 0
SCAMP1-207ENST00000621999 PUS3Q9BZE2 481 aaKnown RBP15.08■□□□□ 0
SCAMP1-207ENST00000621999 JAG2Q9Y219 1238 aa15.08■□□□□ 0
SCAMP1-207ENST00000621999 H7C1W4 665 aa15.07■□□□□ 0
SCAMP1-207ENST00000621999 TPRNQ4KMQ1 711 aa15.07■□□□□ 0
SCAMP1-207ENST00000621999 RC3H1Q5TC82 1133 aaKnown RBP15.07■□□□□ 0
SCAMP1-207ENST00000621999 DBNDD2Q9BQY9 259 aa15.07■□□□□ 0
SCAMP1-207ENST00000621999 SLIT2O94813 1529 aa15.07■□□□□ 0
SCAMP1-207ENST00000621999 RNF20Q5VTR2 975 aa15.07■□□□□ 0
SCAMP1-207ENST00000621999 AMOTL1Q8IY63 956 aa15.07■□□□□ 0
SCAMP1-207ENST00000621999 ZBTB7AO95365 584 aa15.07■□□□□ 0
SCAMP1-207ENST00000621999 TTC22Q5TAA0 569 aa15.07■□□□□ 0
SCAMP1-207ENST00000621999 SIRT2Q8IXJ6 389 aa15.07■□□□□ 0
SCAMP1-207ENST00000621999 ZC3H12CQ9C0D7 883 aaKnown RBP15.07■□□□□ 0
SCAMP1-207ENST00000621999 ADRA2BP18089 450 aa15.06■□□□□ 0
SCAMP1-207ENST00000621999 SLC4A3P48751 1232 aa15.06■□□□□ 0
SCAMP1-207ENST00000621999 BACH2Q9BYV9 841 aa15.06■□□□□ 0
SCAMP1-207ENST00000621999 ZSCAN25Q6NSZ9 544 aa15.06■□□□□ 0
SCAMP1-207ENST00000621999 ISCA1Q9BUE6 129 aa15.06■□□□□ 0
SCAMP1-207ENST00000621999 SLKQ9H2G2 1235 aaPredicted RBP15.06■□□□□ 0
SCAMP1-207ENST00000621999 PSDA5PKW4 1024 aaPredicted RBP15.06■□□□□ 0
SCAMP1-207ENST00000621999 PLEKHM2Q8IWE5 1019 aa15.06■□□□□ 0
SCAMP1-207ENST00000621999 ALS2Q96Q42 1657 aa15.06■□□□□ 0
SCAMP1-207ENST00000621999 TRPM3Q9HCF6 1732 aaPredicted RBP15.06■□□□□ 0
SCAMP1-207ENST00000621999 DCAF8L1A6NGE4 600 aa15.05■□□□□ 0
SCAMP1-207ENST00000621999 ST18O60284 1047 aa15.05■□□□□ 0
SCAMP1-207ENST00000621999 SDSP20132 328 aa15.05■□□□□ 0
SCAMP1-207ENST00000621999 SSFA2P28290 1259 aa15.05■□□□□ 0
SCAMP1-207ENST00000621999 NFIXQ14938 502 aa15.05■□□□□ 0
SCAMP1-207ENST00000621999 TNNI3KQ59H18 835 aa15.05■□□□□ 0
SCAMP1-207ENST00000621999 FPGT-TNNI3KV9GXZ4 949 aa15.05■□□□□ 0
SCAMP1-207ENST00000621999 CAMTA2O94983 1202 aa15.05■□□□□ 0
SCAMP1-207ENST00000621999 TRDNQ13061 729 aa15.05■□□□□ 0
SCAMP1-207ENST00000621999 MAP3K12Q12852 859 aa15.05■□□□□ -0
SCAMP1-207ENST00000621999 BMP2KLQ5H9B9 411 aa15.04■□□□□ -0
SCAMP1-207ENST00000621999 DZIP1Q86YF9 867 aaKnown RBP15.04■□□□□ -0
SCAMP1-207ENST00000621999 TTLL11Q8NHH1 800 aa15.04■□□□□ -0
SCAMP1-207ENST00000621999 TRIM34Q9BYJ4 488 aa15.04■□□□□ -0
SCAMP1-207ENST00000621999 RGPD5Q99666 1765 aa15.04■□□□□ -0
SCAMP1-207ENST00000621999 UFL1O94874 794 aa15.04■□□□□ -0
SCAMP1-207ENST00000621999 PDE6BP35913 854 aa15.04■□□□□ -0
SCAMP1-207ENST00000621999 C2CD5Q86YS7 1000 aa15.04■□□□□ -0
SCAMP1-207ENST00000621999 EVI5LQ96CN4 794 aa15.04■□□□□ -0
SCAMP1-207ENST00000621999 ANKRD2Q9GZV1 360 aa15.04■□□□□ -0
SCAMP1-207ENST00000621999 NDUFB9Q9Y6M9 179 aa15.04■□□□□ -0
SCAMP1-207ENST00000621999 AIDAQ96BJ3 306 aa15.04■□□□□ -0
SCAMP1-207ENST00000621999 KDM2BQ8NHM5 1336 aa15.03■□□□□ -0
SCAMP1-207ENST00000621999 UQCRFS1P1P0C7P4 283 aa15.03■□□□□ -0
SCAMP1-207ENST00000621999 XAGE2Q96GT9 111 aa15.03■□□□□ -0
SCAMP1-207ENST00000621999 CNTNAP4Q9C0A0 1308 aa15.03■□□□□ -0
SCAMP1-207ENST00000621999 PHRF1Q9P1Y6 1649 aaKnown RBP15.03■□□□□ -0
SCAMP1-207ENST00000621999 RAD21O60216 631 aa15.03■□□□□ -0
SCAMP1-207ENST00000621999 R3HDM1Q15032 1099 aaKnown RBP15.03■□□□□ -0
SCAMP1-207ENST00000621999 PUM3Q15397 648 aaKnown RBP15.02■□□□□ -0
SCAMP1-207ENST00000621999 EAF2Q96CJ1 260 aaPredicted RBP15.02■□□□□ -0
SCAMP1-207ENST00000621999 COPRSQ9NQ92 184 aa15.02■□□□□ -0
SCAMP1-207ENST00000621999 F8W031 263 aaPredicted RBP15.02□□□□□ -0.01
SCAMP1-207ENST00000621999 RRP12Q5JTH9 1297 aaKnown RBP15.02□□□□□ -0.01
SCAMP1-207ENST00000621999 RALYLQ86SE5 291 aaKnown RBP15.02□□□□□ -0.01
SCAMP1-207ENST00000621999 TBC1D9Q6ZT07 1266 aa15.02□□□□□ -0.01
SCAMP1-207ENST00000621999 LRP6O75581 1613 aa15.01□□□□□ -0.01
SCAMP1-207ENST00000621999 PTPN12Q05209 780 aaKnown RBP15.01□□□□□ -0.01
SCAMP1-207ENST00000621999 TRIM28Q13263 835 aaKnown RBP15.01□□□□□ -0.01
SCAMP1-207ENST00000621999 RGPD2P0DJD1 1756 aa15.01□□□□□ -0.01
SCAMP1-207ENST00000621999 ALDH1B1P30837 517 aa15.01□□□□□ -0.01
SCAMP1-207ENST00000621999 NBR1Q14596 966 aa15.01□□□□□ -0.01
SCAMP1-207ENST00000621999 LRRC4BQ9NT99 713 aa15.01□□□□□ -0.01
SCAMP1-207ENST00000621999 SLC15A2Q16348 729 aa15□□□□□ -0.01
SCAMP1-207ENST00000621999 DPP8Q6V1X1 898 aaPredicted RBP15□□□□□ -0.01
SCAMP1-207ENST00000621999 GGA1Q9UJY5 639 aa15□□□□□ -0.01
SCAMP1-207ENST00000621999 ZNF34Q8IZ26 560 aa15□□□□□ -0.01
SCAMP1-207ENST00000621999 TDO2P48775 406 aa15□□□□□ -0.01
SCAMP1-207ENST00000621999 PAG1Q9NWQ8 432 aa15□□□□□ -0.01
SCAMP1-207ENST00000621999 NHSL1Q5SYE7 1610 aa15□□□□□ -0.01
SCAMP1-207ENST00000621999 PLEKHG2Q9H7P9 1386 aa15□□□□□ -0.01
SCAMP1-207ENST00000621999 COL16A1Q07092 1604 aaPredicted RBP15□□□□□ -0.01
SCAMP1-207ENST00000621999 CHRNDQ07001 517 aa15□□□□□ -0.01
SCAMP1-207ENST00000621999 ZNF804AQ7Z570 1209 aa15□□□□□ -0.01
SCAMP1-207ENST00000621999 LPIN2Q92539 896 aa15□□□□□ -0.01
SCAMP1-207ENST00000621999 NACAP1Q9BZK3 213 aa15□□□□□ -0.01
SCAMP1-207ENST00000621999 TTC41PQ6P2S7 1318 aa14.99□□□□□ -0.01
SCAMP1-207ENST00000621999 MROH5Q6ZUA9 1318 aa14.99□□□□□ -0.01
SCAMP1-207ENST00000621999 TTF1Q15361 905 aaPredicted RBP14.99□□□□□ -0.01
SCAMP1-207ENST00000621999 BCS1LQ9Y276 419 aa14.99□□□□□ -0.01
SCAMP1-207ENST00000621999 NEK4P51957 841 aa14.99□□□□□ -0.01
SCAMP1-207ENST00000621999 SLC9C2Q5TAH2 1124 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms