RNA–Protein interactions for RNA: ENST00000621573.1

TARDBP-224, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-224ENST00000621573 EVC2Q86UK5 1308 aa11.33□□□□□ -0.6
TARDBP-224ENST00000621573 SPINT1O43278 529 aa11.32□□□□□ -0.6
TARDBP-224ENST00000621573 FOXO3O43524 673 aa11.32□□□□□ -0.6
TARDBP-224ENST00000621573 RFX1P22670 979 aa11.32□□□□□ -0.6
TARDBP-224ENST00000621573 PMFBP1Q8TBY8 1022 aa11.32□□□□□ -0.6
TARDBP-224ENST00000621573 GMPR2Q9P2T1 348 aaKnown RBP11.32□□□□□ -0.6
TARDBP-224ENST00000621573 CDC42BPGQ6DT37 1551 aa11.32□□□□□ -0.6
TARDBP-224ENST00000621573 USP47Q96K76 1375 aa11.31□□□□□ -0.6
TARDBP-224ENST00000621573 STAU1O95793 577 aaKnown RBP11.31□□□□□ -0.6
TARDBP-224ENST00000621573 GNRH1P01148 92 aa11.31□□□□□ -0.6
TARDBP-224ENST00000621573 GTF2IP78347 998 aa11.31□□□□□ -0.6
TARDBP-224ENST00000621573 ARHGEF10LQ9HCE6 1279 aa11.31□□□□□ -0.6
TARDBP-224ENST00000621573 PRR36Q9H6K5 1346 aa11.31□□□□□ -0.6
TARDBP-224ENST00000621573 ARHGEF28Q8N1W1 1705 aaKnown RBP11.3□□□□□ -0.6
TARDBP-224ENST00000621573 A0A1W2PRU2 124 aa11.3□□□□□ -0.6
TARDBP-224ENST00000621573 CLDN10P78369 228 aa11.3□□□□□ -0.6
TARDBP-224ENST00000621573 XPCQ01831 940 aaPredicted RBP11.3□□□□□ -0.6
TARDBP-224ENST00000621573 NGDNQ8NEJ9 315 aaKnown RBP11.3□□□□□ -0.6
TARDBP-224ENST00000621573 RAB6BQ9NRW1 208 aa11.3□□□□□ -0.6
TARDBP-224ENST00000621573 NPHP3Q7Z494 1330 aa11.3□□□□□ -0.6
TARDBP-224ENST00000621573 ROBO1Q9Y6N7 1651 aa11.3□□□□□ -0.6
TARDBP-224ENST00000621573 ANKARQ7Z5J8 1434 aa11.29□□□□□ -0.6
TARDBP-224ENST00000621573 PSME1Q06323 249 aa11.29□□□□□ -0.6
TARDBP-224ENST00000621573 TRIM50Q86XT4 487 aa11.29□□□□□ -0.6
TARDBP-224ENST00000621573 INSM2Q96T92 566 aaPredicted RBP11.29□□□□□ -0.6
TARDBP-224ENST00000621573 VRTNQ9H8Y1 702 aa11.29□□□□□ -0.6
TARDBP-224ENST00000621573 DISP3Q9P2K9 1392 aa11.28□□□□□ -0.6
TARDBP-224ENST00000621573 POTECB2RU33 542 aa11.28□□□□□ -0.6
TARDBP-224ENST00000621573 KRT28Q7Z3Y7 464 aa11.28□□□□□ -0.6
TARDBP-224ENST00000621573 OGFOD1Q8N543 542 aa11.28□□□□□ -0.6
TARDBP-224ENST00000621573 LRRC59Q96AG4 307 aaKnown RBP11.28□□□□□ -0.6
TARDBP-224ENST00000621573 ETNK1Q9HBU6 452 aa11.28□□□□□ -0.6
TARDBP-224ENST00000621573 SENP2Q9HC62 589 aa11.28□□□□□ -0.6
TARDBP-224ENST00000621573 TULP4Q9NRJ4 1543 aa11.27□□□□□ -0.61
TARDBP-224ENST00000621573 MEN1O00255 615 aa11.27□□□□□ -0.61
TARDBP-224ENST00000621573 ZBTB7BO15156 539 aaPredicted RBP11.27□□□□□ -0.61
TARDBP-224ENST00000621573 HSPA5P11021 654 aaKnown RBP11.27□□□□□ -0.61
TARDBP-224ENST00000621573 CTSOP43234 321 aaPredicted RBP11.27□□□□□ -0.61
TARDBP-224ENST00000621573 ATP1A2P50993 1020 aa11.27□□□□□ -0.61
TARDBP-224ENST00000621573 SCNN1DP51172 638 aa11.27□□□□□ -0.61
TARDBP-224ENST00000621573 TMF1P82094 1093 aa11.27□□□□□ -0.61
TARDBP-224ENST00000621573 CLN3Q13286 438 aa11.27□□□□□ -0.61
TARDBP-224ENST00000621573 ILDR2Q71H61 639 aa11.27□□□□□ -0.61
TARDBP-224ENST00000621573 TRIM47Q96LD4 638 aa11.27□□□□□ -0.61
TARDBP-224ENST00000621573 TESK2Q96S53 571 aa11.27□□□□□ -0.61
TARDBP-224ENST00000621573 DNAAF2Q9NVR5 837 aaKnown RBP11.27□□□□□ -0.61
TARDBP-224ENST00000621573 KIAA1024Q9UPX6 916 aa11.27□□□□□ -0.61
TARDBP-224ENST00000621573 ADGRB2O60241 1585 aa11.27□□□□□ -0.61
TARDBP-224ENST00000621573 IL2RAP01589 272 aa11.26□□□□□ -0.61
TARDBP-224ENST00000621573 RASA1P20936 1047 aa11.26□□□□□ -0.61
TARDBP-224ENST00000621573 CDCA8Q53HL2 280 aa11.26□□□□□ -0.61
TARDBP-224ENST00000621573 TMC1Q8TDI8 760 aa11.26□□□□□ -0.61
TARDBP-224ENST00000621573 CABP1Q9NZU7 370 aa11.26□□□□□ -0.61
TARDBP-224ENST00000621573 SOS2Q07890 1332 aaPredicted RBP11.26□□□□□ -0.61
TARDBP-224ENST00000621573 SBNO2Q9Y2G9 1366 aa11.26□□□□□ -0.61
TARDBP-224ENST00000621573 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.25□□□□□ -0.61
TARDBP-224ENST00000621573 TMEM229AB2RXF0 380 aa11.25□□□□□ -0.61
TARDBP-224ENST00000621573 GDF10P55107 478 aa11.25□□□□□ -0.61
TARDBP-224ENST00000621573 CRTC2Q53ET0 693 aaPredicted RBP11.25□□□□□ -0.61
TARDBP-224ENST00000621573 CNKSR1Q969H4 720 aa11.25□□□□□ -0.61
TARDBP-224ENST00000621573 KIFC2Q96AC6 838 aa11.25□□□□□ -0.61
TARDBP-224ENST00000621573 ARID3AQ99856 593 aa11.25□□□□□ -0.61
TARDBP-224ENST00000621573 POLMQ9NP87 494 aaPredicted RBP11.25□□□□□ -0.61
TARDBP-224ENST00000621573 FMN2Q9NZ56 1722 aa11.25□□□□□ -0.61
TARDBP-224ENST00000621573 ACEP12821 1306 aa11.25□□□□□ -0.61
TARDBP-224ENST00000621573 JCADQ9P266 1359 aa11.25□□□□□ -0.61
TARDBP-224ENST00000621573 QRICH2Q9H0J4 1663 aa11.24□□□□□ -0.61
TARDBP-224ENST00000621573 TTLL8A6PVC2 850 aa11.24□□□□□ -0.61
TARDBP-224ENST00000621573 FOXD4L5Q5VV16 416 aaPredicted RBP11.24□□□□□ -0.61
TARDBP-224ENST00000621573 LARGE2Q8N3Y3 721 aa11.24□□□□□ -0.61
TARDBP-224ENST00000621573 XAGE2Q96GT9 111 aa11.24□□□□□ -0.61
TARDBP-224ENST00000621573 ZNF594Q96JF6 807 aaPredicted RBP11.24□□□□□ -0.61
TARDBP-224ENST00000621573 ESYT1Q9BSJ8 1104 aa11.24□□□□□ -0.61
TARDBP-224ENST00000621573 ATAD2Q6PL18 1390 aa11.24□□□□□ -0.61
TARDBP-224ENST00000621573 ATP7BP35670 1465 aa11.24□□□□□ -0.61
TARDBP-224ENST00000621573 AHDC1Q5TGY3 1603 aaPredicted RBP11.24□□□□□ -0.61
TARDBP-224ENST00000621573 C11orf95C9JLR9 678 aaPredicted RBP11.23□□□□□ -0.61
TARDBP-224ENST00000621573 INHAP05111 366 aa11.23□□□□□ -0.61
TARDBP-224ENST00000621573 SNRPBP14678 240 aaKnown RBP11.23□□□□□ -0.61
TARDBP-224ENST00000621573 CCDC102BQ68D86 513 aa11.23□□□□□ -0.61
TARDBP-224ENST00000621573 TPCN2Q8NHX9 752 aa11.23□□□□□ -0.61
TARDBP-224ENST00000621573 NLRP3Q96P20 1036 aa11.23□□□□□ -0.61
TARDBP-224ENST00000621573 POLR3GLQ9BT43 218 aa11.23□□□□□ -0.61
TARDBP-224ENST00000621573 HRH3Q9Y5N1 445 aa11.23□□□□□ -0.61
TARDBP-224ENST00000621573 PPIP5K1Q6PFW1 1433 aa11.23□□□□□ -0.61
TARDBP-224ENST00000621573 PHLPP1O60346 1717 aa11.23□□□□□ -0.61
TARDBP-224ENST00000621573 FAM196BA6NMK8 535 aa11.22□□□□□ -0.61
TARDBP-224ENST00000621573 DKK1O94907 266 aa11.22□□□□□ -0.61
TARDBP-224ENST00000621573 RNF144AP50876 292 aaPredicted RBP11.22□□□□□ -0.61
TARDBP-224ENST00000621573 PTK7Q13308 1070 aa11.22□□□□□ -0.61
TARDBP-224ENST00000621573 LARP1Q6PKG0 1096 aaKnown RBP11.22□□□□□ -0.61
TARDBP-224ENST00000621573 SIX5Q8N196 739 aa11.22□□□□□ -0.61
TARDBP-224ENST00000621573 PUS7Q96PZ0 661 aaKnown RBP11.22□□□□□ -0.61
TARDBP-224ENST00000621573 SPATA31A3Q5VYP0 1347 aa11.21□□□□□ -0.61
TARDBP-224ENST00000621573 USP17L15C9J2P7 530 aa11.21□□□□□ -0.61
TARDBP-224ENST00000621573 USP17L10C9JJH3 530 aa11.21□□□□□ -0.61
TARDBP-224ENST00000621573 USP17L13C9JLJ4 530 aa11.21□□□□□ -0.61
TARDBP-224ENST00000621573 USP17L12C9JPN9 530 aa11.21□□□□□ -0.61
TARDBP-224ENST00000621573 USP17L11C9JVI0 530 aa11.21□□□□□ -0.61
TARDBP-224ENST00000621573 USP17L21D6R901 530 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms