RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 NFKBIEO00221 500 aa23.13■■□□□ 1.29
LITAF-220ENST00000620789 YY1P25490 414 aa23.13■■□□□ 1.29
LITAF-220ENST00000620789 RASSF7Q02833 373 aa23.13■■□□□ 1.29
LITAF-220ENST00000620789 CCDC152Q4G0S7 254 aa23.13■■□□□ 1.29
LITAF-220ENST00000620789 OLFM4Q6UX06 510 aa23.13■■□□□ 1.29
LITAF-220ENST00000620789 PLA2G12BQ9BX93 195 aa23.13■■□□□ 1.29
LITAF-220ENST00000620789 C9orf78Q9NZ63 289 aaPredicted RBP23.13■■□□□ 1.29
LITAF-220ENST00000620789 IPO8O15397 1037 aaKnown RBP23.12■■□□□ 1.29
LITAF-220ENST00000620789 BBOX1O75936 387 aa23.12■■□□□ 1.29
LITAF-220ENST00000620789 TAF1P21675 1872 aa23.12■■□□□ 1.29
LITAF-220ENST00000620789 YTHDC1Q96MU7 727 aaKnown RBP23.12■■□□□ 1.29
LITAF-220ENST00000620789 CC2D2BQ6DHV5 1058 aa23.11■■□□□ 1.29
LITAF-220ENST00000620789 TTLL11Q8NHH1 800 aa23.11■■□□□ 1.29
LITAF-220ENST00000620789 FRAT1Q92837 279 aaPredicted RBP23.11■■□□□ 1.29
LITAF-220ENST00000620789 LTBP3Q9NS15 1303 aa23.1■■□□□ 1.29
LITAF-220ENST00000620789 COL4A1P02462 1669 aa23.1■■□□□ 1.29
LITAF-220ENST00000620789 SNED1Q8TER0 1413 aa23.1■■□□□ 1.29
LITAF-220ENST00000620789 CCT4P50991 539 aaKnown RBP23.1■■□□□ 1.29
LITAF-220ENST00000620789 RTKN2Q8IZC4 609 aa23.1■■□□□ 1.29
LITAF-220ENST00000620789 CELF1Q92879 486 aaKnown RBP23.1■■□□□ 1.29
LITAF-220ENST00000620789 CCDC85AQ96PX6 553 aaPredicted RBP23.1■■□□□ 1.29
LITAF-220ENST00000620789 TAOK3Q9H2K8 898 aa23.1■■□□□ 1.29
LITAF-220ENST00000620789 ATP6V0A2Q9Y487 856 aa23.1■■□□□ 1.29
LITAF-220ENST00000620789 SBF1O95248 1867 aa23.1■■□□□ 1.29
LITAF-220ENST00000620789 UTYO14607 1347 aa23.09■■□□□ 1.29
LITAF-220ENST00000620789 ATF7IPQ6VMQ6 1270 aa23.09■■□□□ 1.29
LITAF-220ENST00000620789 TMC4Q7Z404 712 aa23.09■■□□□ 1.29
LITAF-220ENST00000620789 SEC31BQ9NQW1 1179 aa23.09■■□□□ 1.29
LITAF-220ENST00000620789 TRIM27P14373 513 aa23.08■■□□□ 1.29
LITAF-220ENST00000620789 LMNB1P20700 586 aa23.08■■□□□ 1.29
LITAF-220ENST00000620789 PRELPP51888 382 aa23.08■■□□□ 1.29
LITAF-220ENST00000620789 GRIPAP1Q4V328 841 aa23.08■■□□□ 1.29
LITAF-220ENST00000620789 C9orf131Q5VYM1 1079 aa23.08■■□□□ 1.29
LITAF-220ENST00000620789 SLC51AQ86UW1 340 aa23.08■■□□□ 1.29
LITAF-220ENST00000620789 SP8Q8IXZ3 490 aa23.08■■□□□ 1.29
LITAF-220ENST00000620789 TMX4Q9H1E5 349 aaPredicted RBP23.08■■□□□ 1.29
LITAF-220ENST00000620789 RTL9Q8NET4 1388 aa23.08■■□□□ 1.29
LITAF-220ENST00000620789 CSF1RP07333 972 aa23.07■■□□□ 1.28
LITAF-220ENST00000620789 NBPF7P0C2Y1 421 aaPredicted RBP23.07■■□□□ 1.28
LITAF-220ENST00000620789 FOXO4P98177 505 aa23.07■■□□□ 1.28
LITAF-220ENST00000620789 FKBP4Q02790 459 aaKnown RBP eCLIP23.07■■□□□ 1.28
LITAF-220ENST00000620789 GREM2Q9H772 168 aa23.07■■□□□ 1.28
LITAF-220ENST00000620789 RNF181Q9P0P0 153 aa23.07■■□□□ 1.28
LITAF-220ENST00000620789 LRRC37AA6NMS7 1700 aa23.07■■□□□ 1.28
LITAF-220ENST00000620789 RPS8P62241 208 aaKnown RBP23.06■■□□□ 1.28
LITAF-220ENST00000620789 ZKSCAN2Q63HK3 967 aa23.06■■□□□ 1.28
LITAF-220ENST00000620789 USP44Q9H0E7 712 aa23.06■■□□□ 1.28
LITAF-220ENST00000620789 CDC5LQ99459 802 aaKnown RBP23.05■■□□□ 1.28
LITAF-220ENST00000620789 PSMD1Q99460 953 aa23.05■■□□□ 1.28
LITAF-220ENST00000620789 EPHA10Q5JZY3 1008 aa23.04■■□□□ 1.28
LITAF-220ENST00000620789 INTS3Q68E01 1043 aaKnown RBP23.04■■□□□ 1.28
LITAF-220ENST00000620789 SUCLG2Q96I99 432 aa23.04■■□□□ 1.28
LITAF-220ENST00000620789 TNNQ9UQP3 1299 aa23.04■■□□□ 1.28
LITAF-220ENST00000620789 CCDC88AQ3V6T2 1871 aa23.04■■□□□ 1.28
LITAF-220ENST00000620789 FAM161AQ3B820 660 aa23.03■■□□□ 1.28
LITAF-220ENST00000620789 ANKRD18AQ8IVF6 992 aa23.03■■□□□ 1.28
LITAF-220ENST00000620789 ITGA6P23229 1130 aa23.02■■□□□ 1.28
LITAF-220ENST00000620789 LMBR1LQ6UX01 489 aa23.02■■□□□ 1.28
LITAF-220ENST00000620789 CLUAP1Q96AJ1 413 aa23.02■■□□□ 1.28
LITAF-220ENST00000620789 KAZALD1Q96I82 304 aa23.02■■□□□ 1.28
LITAF-220ENST00000620789 RCAN3Q9UKA8 241 aa23.02■■□□□ 1.28
LITAF-220ENST00000620789 TIAM2Q8IVF5 1701 aa23.02■■□□□ 1.28
LITAF-220ENST00000620789 MPNDQ8N594 471 aa23.01■■□□□ 1.27
LITAF-220ENST00000620789 ZNF277Q9NRM2 450 aaPredicted RBP23.01■■□□□ 1.27
LITAF-220ENST00000620789 DICER1Q9UPY3 1922 aaKnown RBP23.01■■□□□ 1.27
LITAF-220ENST00000620789 DPP8Q6V1X1 898 aaPredicted RBP23■■□□□ 1.27
LITAF-220ENST00000620789 CHMP3Q9Y3E7 222 aa23■■□□□ 1.27
LITAF-220ENST00000620789 ZC3H4Q9UPT8 1303 aaKnown RBP23■■□□□ 1.27
LITAF-220ENST00000620789 SPEF2Q9C093 1822 aa22.99■■□□□ 1.27
LITAF-220ENST00000620789 ANKRD18BA2A2Z9 1011 aa22.99■■□□□ 1.27
LITAF-220ENST00000620789 IARSP41252 1262 aaKnown RBP22.99■■□□□ 1.27
LITAF-220ENST00000620789 RTFDC1Q9BY42 306 aaPredicted RBP22.99■■□□□ 1.27
LITAF-220ENST00000620789 BICC1Q9H694 974 aaKnown RBP22.99■■□□□ 1.27
LITAF-220ENST00000620789 DUOX1Q9NRD9 1551 aa22.98■■□□□ 1.27
LITAF-220ENST00000620789 UBTFL1P0CB47 393 aaPredicted RBP22.98■■□□□ 1.27
LITAF-220ENST00000620789 IGHMBP2P38935 993 aaKnown RBP22.98■■□□□ 1.27
LITAF-220ENST00000620789 IFIT5Q13325 482 aaKnown RBP22.98■■□□□ 1.27
LITAF-220ENST00000620789 RABL6Q3YEC7 729 aaPredicted RBP22.98■■□□□ 1.27
LITAF-220ENST00000620789 ZNF784Q8NCA9 323 aaPredicted RBP22.98■■□□□ 1.27
LITAF-220ENST00000620789 SUPT20HQ8NEM7 779 aa22.98■■□□□ 1.27
LITAF-220ENST00000620789 BSDC1Q9NW68 430 aaPredicted RBP22.98■■□□□ 1.27
LITAF-220ENST00000620789 LTBP1Q14766 1721 aa22.98■■□□□ 1.27
LITAF-220ENST00000620789 GPSM2P81274 684 aa22.97■■□□□ 1.27
LITAF-220ENST00000620789 FTSJ3Q8IY81 847 aaKnown RBP22.97■■□□□ 1.27
LITAF-220ENST00000620789 DZIP1LQ8IYY4 767 aaKnown RBP22.97■■□□□ 1.27
LITAF-220ENST00000620789 TMEM57Q8N5G2 664 aa22.97■■□□□ 1.27
LITAF-220ENST00000620789 ANKRD44Q8N8A2 993 aa22.97■■□□□ 1.27
LITAF-220ENST00000620789 MEIS3Q99687 375 aa22.97■■□□□ 1.27
LITAF-220ENST00000620789 NSFL1CQ9UNZ2 370 aaKnown RBP22.97■■□□□ 1.27
LITAF-220ENST00000620789 CCDC57Q2TAC2 916 aa22.96■■□□□ 1.27
LITAF-220ENST00000620789 MPHOSPH8Q99549 860 aa22.95■■□□□ 1.26
LITAF-220ENST00000620789 VPS33BQ9H267 617 aa22.95■■□□□ 1.26
LITAF-220ENST00000620789 PODXL2Q9NZ53 605 aa22.95■■□□□ 1.26
LITAF-220ENST00000620789 HDAC5Q9UQL6 1122 aa22.95■■□□□ 1.26
LITAF-220ENST00000620789 GNAI3P08754 354 aa22.94■■□□□ 1.26
LITAF-220ENST00000620789 RLBP1P12271 317 aa22.94■■□□□ 1.26
LITAF-220ENST00000620789 ANKIB1Q9P2G1 1089 aa22.94■■□□□ 1.26
LITAF-220ENST00000620789 MINPP1Q9UNW1 487 aa22.94■■□□□ 1.26
LITAF-220ENST00000620789 XDHP47989 1333 aa22.93■■□□□ 1.26
LITAF-220ENST00000620789 PPIP5K2O43314 1243 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms