RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, human

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-223	ENST00000620632	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.7	□□□□□ -0.22
TARDBP-223	ENST00000620632	CRAMP1	Q96RY5	1269 aa		13.7	□□□□□ -0.22
TARDBP-223	ENST00000620632	SRCIN1	Q9C0H9	1055 aa		13.7	□□□□□ -0.22
TARDBP-223	ENST00000620632	TIAM2	Q8IVF5	1701 aa		13.7	□□□□□ -0.22
TARDBP-223	ENST00000620632	KIF16B	Q96L93	1317 aa		13.69	□□□□□ -0.22
TARDBP-223	ENST00000620632	GRM8	O00222	908 aa		13.69	□□□□□ -0.22
TARDBP-223	ENST00000620632	ALDH1B1	P30837	517 aa		13.69	□□□□□ -0.22
TARDBP-223	ENST00000620632	CTSW	P56202	376 aa		13.69	□□□□□ -0.22
TARDBP-223	ENST00000620632	SEC31B	Q9NQW1	1179 aa		13.69	□□□□□ -0.22
TARDBP-223	ENST00000620632	LTBP1	Q14766	1721 aa		13.69	□□□□□ -0.22
TARDBP-223	ENST00000620632		A0A1B0GUL6	1792 aa		13.68	□□□□□ -0.22
TARDBP-223	ENST00000620632	PPEF1	O14829	653 aa	Predicted RBP	13.68	□□□□□ -0.22
TARDBP-223	ENST00000620632	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.68	□□□□□ -0.22
TARDBP-223	ENST00000620632	TRIM27	P14373	513 aa		13.68	□□□□□ -0.22
TARDBP-223	ENST00000620632	EPHA10	Q5JZY3	1008 aa		13.68	□□□□□ -0.22
TARDBP-223	ENST00000620632	TTLL11	Q8NHH1	800 aa		13.68	□□□□□ -0.22
TARDBP-223	ENST00000620632	FRAT1	Q92837	279 aa	Predicted RBP	13.68	□□□□□ -0.22
TARDBP-223	ENST00000620632	CELF1	Q92879	486 aa	Known RBP	13.68	□□□□□ -0.22
TARDBP-223	ENST00000620632	KAZALD1	Q96I82	304 aa		13.68	□□□□□ -0.22
TARDBP-223	ENST00000620632	PLA2G12B	Q9BX93	195 aa		13.68	□□□□□ -0.22
TARDBP-223	ENST00000620632	UTY	O14607	1347 aa		13.67	□□□□□ -0.22
TARDBP-223	ENST00000620632	DUOX1	Q9NRD9	1551 aa		13.67	□□□□□ -0.22
TARDBP-223	ENST00000620632	FOXO4	P98177	505 aa		13.67	□□□□□ -0.22
TARDBP-223	ENST00000620632	GRAP	Q13588	217 aa		13.67	□□□□□ -0.22
TARDBP-223	ENST00000620632	DDX46	Q7L014	1031 aa	Known RBP	13.67	□□□□□ -0.22
TARDBP-223	ENST00000620632	GRAPL	Q8TC17	118 aa	Predicted RBP	13.67	□□□□□ -0.22
TARDBP-223	ENST00000620632	ARHGAP45	Q92619	1136 aa		13.67	□□□□□ -0.22
TARDBP-223	ENST00000620632	API5	Q9BZZ5	524 aa	Known RBP	13.67	□□□□□ -0.22
TARDBP-223	ENST00000620632	GREM2	Q9H772	168 aa		13.67	□□□□□ -0.22
TARDBP-223	ENST00000620632	ATF7IP	Q6VMQ6	1270 aa		13.66	□□□□□ -0.22
TARDBP-223	ENST00000620632	SUCLG2	Q96I99	432 aa		13.66	□□□□□ -0.22
TARDBP-223	ENST00000620632	USP44	Q9H0E7	712 aa		13.66	□□□□□ -0.22
TARDBP-223	ENST00000620632	COL4A5	P29400	1685 aa		13.66	□□□□□ -0.22
TARDBP-223	ENST00000620632	CSF1R	P07333	972 aa		13.65	□□□□□ -0.22
TARDBP-223	ENST00000620632	FAM161A	Q3B820	660 aa		13.65	□□□□□ -0.22
TARDBP-223	ENST00000620632	CCDC152	Q4G0S7	254 aa		13.65	□□□□□ -0.22
TARDBP-223	ENST00000620632	CCDC93	Q567U6	631 aa		13.65	□□□□□ -0.22
TARDBP-223	ENST00000620632	CLUAP1	Q96AJ1	413 aa		13.65	□□□□□ -0.22
TARDBP-223	ENST00000620632	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.65	□□□□□ -0.22
TARDBP-223	ENST00000620632	RTL9	Q8NET4	1388 aa		13.65	□□□□□ -0.22
TARDBP-223	ENST00000620632	RLBP1	P12271	317 aa		13.64	□□□□□ -0.23
TARDBP-223	ENST00000620632	HSP90B1	P14625	803 aa	Known RBP	13.64	□□□□□ -0.23
TARDBP-223	ENST00000620632	YY1	P25490	414 aa		13.64	□□□□□ -0.23
TARDBP-223	ENST00000620632	CCT4	P50991	539 aa	Known RBP	13.64	□□□□□ -0.23
TARDBP-223	ENST00000620632	ZKSCAN2	Q63HK3	967 aa		13.64	□□□□□ -0.23
TARDBP-223	ENST00000620632	INTS3	Q68E01	1043 aa	Known RBP	13.64	□□□□□ -0.23
TARDBP-223	ENST00000620632	RCAN3	Q9UKA8	241 aa		13.64	□□□□□ -0.23
TARDBP-223	ENST00000620632	ATP6V0A2	Q9Y487	856 aa		13.64	□□□□□ -0.23
TARDBP-223	ENST00000620632	LTBP3	Q9NS15	1303 aa		13.64	□□□□□ -0.23
TARDBP-223	ENST00000620632	IPO8	O15397	1037 aa	Known RBP	13.63	□□□□□ -0.23
TARDBP-223	ENST00000620632	BBOX1	O75936	387 aa		13.63	□□□□□ -0.23
TARDBP-223	ENST00000620632	SOGA3	Q5TF21	947 aa		13.63	□□□□□ -0.23
TARDBP-223	ENST00000620632	C9orf131	Q5VYM1	1079 aa		13.63	□□□□□ -0.23
TARDBP-223	ENST00000620632	TMEM57	Q8N5G2	664 aa		13.63	□□□□□ -0.23
TARDBP-223	ENST00000620632	TAOK3	Q9H2K8	898 aa		13.63	□□□□□ -0.23
TARDBP-223	ENST00000620632	ITGA6	P23229	1130 aa		13.62	□□□□□ -0.23
TARDBP-223	ENST00000620632	RPS8	P62241	208 aa	Known RBP	13.62	□□□□□ -0.23
TARDBP-223	ENST00000620632	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
TARDBP-223	ENST00000620632	LMBR1L	Q6UX01	489 aa		13.62	□□□□□ -0.23
TARDBP-223	ENST00000620632	SP8	Q8IXZ3	490 aa		13.62	□□□□□ -0.23
TARDBP-223	ENST00000620632	ANKRD44	Q8N8A2	993 aa		13.62	□□□□□ -0.23
TARDBP-223	ENST00000620632	MEIS3	Q99687	375 aa		13.62	□□□□□ -0.23
TARDBP-223	ENST00000620632	BICC1	Q9H694	974 aa	Known RBP	13.62	□□□□□ -0.23
TARDBP-223	ENST00000620632	RNF181	Q9P0P0	153 aa		13.62	□□□□□ -0.23
TARDBP-223	ENST00000620632	PLIN1	O60240	522 aa		13.61	□□□□□ -0.23
TARDBP-223	ENST00000620632	LMNB1	P20700	586 aa		13.61	□□□□□ -0.23
TARDBP-223	ENST00000620632	RABL6	Q3YEC7	729 aa	Predicted RBP	13.61	□□□□□ -0.23
TARDBP-223	ENST00000620632	CC2D2B	Q6DHV5	1058 aa		13.61	□□□□□ -0.23
TARDBP-223	ENST00000620632	RTKN2	Q8IZC4	609 aa		13.61	□□□□□ -0.23
TARDBP-223	ENST00000620632	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.61	□□□□□ -0.23
TARDBP-223	ENST00000620632	GPSM2	P81274	684 aa		13.6	□□□□□ -0.23
TARDBP-223	ENST00000620632	ANKRD18A	Q8IVF6	992 aa		13.6	□□□□□ -0.23
TARDBP-223	ENST00000620632	PSMD1	Q99460	953 aa		13.6	□□□□□ -0.23
TARDBP-223	ENST00000620632	TMC4	Q7Z404	712 aa		13.59	□□□□□ -0.23
TARDBP-223	ENST00000620632	DZIP1L	Q8IYY4	767 aa	Known RBP	13.59	□□□□□ -0.23
TARDBP-223	ENST00000620632	PANK1	Q8TE04	598 aa		13.59	□□□□□ -0.23
TARDBP-223	ENST00000620632	ZNF594	Q96JF6	807 aa	Predicted RBP	13.59	□□□□□ -0.23
TARDBP-223	ENST00000620632	CDC5L	Q99459	802 aa	Known RBP	13.59	□□□□□ -0.23
TARDBP-223	ENST00000620632	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.59	□□□□□ -0.23
TARDBP-223	ENST00000620632	CHMP3	Q9Y3E7	222 aa		13.59	□□□□□ -0.23
TARDBP-223	ENST00000620632	ANKRD18B	A2A2Z9	1011 aa		13.58	□□□□□ -0.24
TARDBP-223	ENST00000620632	WTIP	A6NIX2	430 aa	Predicted RBP	13.58	□□□□□ -0.24
TARDBP-223	ENST00000620632	UBTFL1	P0CB47	393 aa	Predicted RBP	13.58	□□□□□ -0.24
TARDBP-223	ENST00000620632	IARS	P41252	1262 aa	Known RBP	13.58	□□□□□ -0.24
TARDBP-223	ENST00000620632	MPND	Q8N594	471 aa		13.58	□□□□□ -0.24
TARDBP-223	ENST00000620632	GPR101	Q96P66	508 aa	Predicted RBP	13.58	□□□□□ -0.24
TARDBP-223	ENST00000620632	BSDC1	Q9NW68	430 aa	Predicted RBP	13.58	□□□□□ -0.24
TARDBP-223	ENST00000620632	POLL	Q9UGP5	575 aa		13.58	□□□□□ -0.24
TARDBP-223	ENST00000620632	LRRFIP2	Q9Y608	721 aa	Known RBP	13.58	□□□□□ -0.24
TARDBP-223	ENST00000620632	SCN9A	Q15858	1988 aa		13.58	□□□□□ -0.24
TARDBP-223	ENST00000620632	IFIT5	Q13325	482 aa	Known RBP	13.57	□□□□□ -0.24
TARDBP-223	ENST00000620632	DPP8	Q6V1X1	898 aa	Predicted RBP	13.57	□□□□□ -0.24
TARDBP-223	ENST00000620632	FTSJ3	Q8IY81	847 aa	Known RBP	13.57	□□□□□ -0.24
TARDBP-223	ENST00000620632	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.57	□□□□□ -0.24
TARDBP-223	ENST00000620632	MINPP1	Q9UNW1	487 aa		13.57	□□□□□ -0.24
TARDBP-223	ENST00000620632	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.57	□□□□□ -0.24
TARDBP-223	ENST00000620632	ZNF646	O15015	1829 aa	Predicted RBP	13.56	□□□□□ -0.24
TARDBP-223	ENST00000620632	IGHMBP2	P38935	993 aa	Known RBP	13.56	□□□□□ -0.24
TARDBP-223	ENST00000620632	RFX5	P48382	616 aa	Predicted RBP	13.56	□□□□□ -0.24
TARDBP-223	ENST00000620632	AOC3	Q16853	763 aa		13.56	□□□□□ -0.24

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