RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 TBCAO75347 108 aaKnown RBP13.08□□□□□ -0.32
PCDHA4-204ENST00000618834 TTC36A6NLP5 189 aa13.08□□□□□ -0.32
PCDHA4-204ENST00000618834 CCDC14Q49A88 953 aa13.08□□□□□ -0.32
PCDHA4-204ENST00000618834 PLCD3Q8N3E9 789 aa13.08□□□□□ -0.32
PCDHA4-204ENST00000618834 RANBP6O60518 1105 aaKnown RBP13.08□□□□□ -0.32
PCDHA4-204ENST00000618834 CCDC174Q6PII3 467 aa13.08□□□□□ -0.32
PCDHA4-204ENST00000618834 GTF3C6Q969F1 213 aa13.08□□□□□ -0.32
PCDHA4-204ENST00000618834 FAM114A2Q9NRY5 505 aa13.08□□□□□ -0.32
PCDHA4-204ENST00000618834 GIMAP6Q6P9H5 292 aa13.08□□□□□ -0.32
PCDHA4-204ENST00000618834 ISM2Q6H9L7 571 aa13.08□□□□□ -0.32
PCDHA4-204ENST00000618834 FAM200AQ8TCP9 573 aa13.08□□□□□ -0.32
PCDHA4-204ENST00000618834 RNF168Q8IYW5 571 aaPredicted RBP13.07□□□□□ -0.32
PCDHA4-204ENST00000618834 STAT6P42226 847 aa13.07□□□□□ -0.32
PCDHA4-204ENST00000618834 SMIM23A6NLE4 172 aa13.07□□□□□ -0.32
PCDHA4-204ENST00000618834 KRT86O43790 486 aa13.07□□□□□ -0.32
PCDHA4-204ENST00000618834 TUBBP07437 444 aa13.07□□□□□ -0.32
PCDHA4-204ENST00000618834 CRACR2BQ8N4Y2 399 aaPredicted RBP13.07□□□□□ -0.32
PCDHA4-204ENST00000618834 TBC1D9Q6ZT07 1266 aa13.07□□□□□ -0.32
PCDHA4-204ENST00000618834 ERMNQ8TAM6 284 aa13.07□□□□□ -0.32
PCDHA4-204ENST00000618834 HMG20BQ9P0W2 317 aa13.07□□□□□ -0.32
PCDHA4-204ENST00000618834 SF3B2Q13435 895 aaKnown RBP13.07□□□□□ -0.32
PCDHA4-204ENST00000618834 SH2D4BQ5SQS7 431 aa13.07□□□□□ -0.32
PCDHA4-204ENST00000618834 FYB2Q5VWT5 728 aa13.07□□□□□ -0.32
PCDHA4-204ENST00000618834 TTC16Q8NEE8 873 aa13.07□□□□□ -0.32
PCDHA4-204ENST00000618834 BICD1Q96G01 975 aa13.07□□□□□ -0.32
PCDHA4-204ENST00000618834 IFT81Q8WYA0 676 aa13.06□□□□□ -0.32
PCDHA4-204ENST00000618834 NUF2Q9BZD4 464 aa13.06□□□□□ -0.32
PCDHA4-204ENST00000618834 RBM28Q9NW13 759 aaKnown RBP13.06□□□□□ -0.32
PCDHA4-204ENST00000618834 PTPN23Q9H3S7 1636 aa13.06□□□□□ -0.32
PCDHA4-204ENST00000618834 KRT83P78385 493 aa13.06□□□□□ -0.32
PCDHA4-204ENST00000618834 KCNK9Q9NPC2 374 aa13.06□□□□□ -0.32
PCDHA4-204ENST00000618834 ERCC6LQ2NKX8 1250 aa13.06□□□□□ -0.32
PCDHA4-204ENST00000618834 MTRF1LQ9UGC7 380 aaKnown RBP13.06□□□□□ -0.32
PCDHA4-204ENST00000618834 PTGS1P23219 599 aa13.06□□□□□ -0.32
PCDHA4-204ENST00000618834 UBA7P41226 1012 aa13.06□□□□□ -0.32
PCDHA4-204ENST00000618834 TMEM132EQ6IEE7 984 aa13.06□□□□□ -0.32
PCDHA4-204ENST00000618834 KCNG4Q8TDN1 519 aa13.06□□□□□ -0.32
PCDHA4-204ENST00000618834 UBLCP1Q8WVY7 318 aaPredicted RBP13.06□□□□□ -0.32
PCDHA4-204ENST00000618834 NKIRAS1Q9NYS0 192 aa13.06□□□□□ -0.32
PCDHA4-204ENST00000618834 ABCF2Q9UG63 623 aa13.06□□□□□ -0.32
PCDHA4-204ENST00000618834 MAP3K12Q12852 859 aa13.06□□□□□ -0.32
PCDHA4-204ENST00000618834 NSD3Q9BZ95 1437 aa13.06□□□□□ -0.32
PCDHA4-204ENST00000618834 LRPPRCP42704 1394 aaKnown RBP13.06□□□□□ -0.32
PCDHA4-204ENST00000618834 IFIT3O14879 490 aaKnown RBP13.06□□□□□ -0.32
PCDHA4-204ENST00000618834 NBPF8Q3BBV2 869 aa13.06□□□□□ -0.32
PCDHA4-204ENST00000618834 CCDC170Q8IYT3 715 aa13.06□□□□□ -0.32
PCDHA4-204ENST00000618834 CNPY2Q9Y2B0 182 aa13.06□□□□□ -0.32
PCDHA4-204ENST00000618834 CASKIN1Q8WXD9 1431 aa13.05□□□□□ -0.32
PCDHA4-204ENST00000618834 RHOXF2BP0C7M4 288 aa13.05□□□□□ -0.32
PCDHA4-204ENST00000618834 RHOXF2Q9BQY4 288 aa13.05□□□□□ -0.32
PCDHA4-204ENST00000618834 HFM1A2PYH4 1435 aa13.05□□□□□ -0.32
PCDHA4-204ENST00000618834 PTPRGP23470 1445 aa13.05□□□□□ -0.32
PCDHA4-204ENST00000618834 CHMP4BP1P59074 171 aa13.05□□□□□ -0.32
PCDHA4-204ENST00000618834 ALDH1L2Q3SY69 923 aa13.05□□□□□ -0.32
PCDHA4-204ENST00000618834 KIAA1524Q8TCG1 905 aa13.05□□□□□ -0.32
PCDHA4-204ENST00000618834 VCXQ9H320 206 aa13.05□□□□□ -0.32
PCDHA4-204ENST00000618834 BOLA2Q9H3K6 86 aa13.05□□□□□ -0.32
PCDHA4-204ENST00000618834 NDC80O14777 642 aa13.05□□□□□ -0.32
PCDHA4-204ENST00000618834 CAVIN4Q5BKX8 364 aa13.05□□□□□ -0.32
PCDHA4-204ENST00000618834 RRAGBQ5VZM2 374 aa13.05□□□□□ -0.32
PCDHA4-204ENST00000618834 ARFGAP2Q8N6H7 521 aa13.05□□□□□ -0.32
PCDHA4-204ENST00000618834 DDX54Q8TDD1 881 aaKnown RBP13.05□□□□□ -0.32
PCDHA4-204ENST00000618834 ZKSCAN5Q9Y2L8 839 aa13.05□□□□□ -0.32
PCDHA4-204ENST00000618834 TIAM1Q13009 1591 aa13.05□□□□□ -0.32
PCDHA4-204ENST00000618834 TMEM110-MUSTN1A8MSY1 372 aa13.05□□□□□ -0.32
PCDHA4-204ENST00000618834 CEP128Q6ZU80 1094 aa13.05□□□□□ -0.32
PCDHA4-204ENST00000618834 RAD54L2Q9Y4B4 1467 aa13.05□□□□□ -0.32
PCDHA4-204ENST00000618834 ZNF213O14771 459 aa13.05□□□□□ -0.32
PCDHA4-204ENST00000618834 PHACTR2O75167 634 aa13.05□□□□□ -0.32
PCDHA4-204ENST00000618834 PDE1CQ14123 709 aaPredicted RBP13.05□□□□□ -0.32
PCDHA4-204ENST00000618834 ZSCAN22P10073 491 aaPredicted RBP13.05□□□□□ -0.32
PCDHA4-204ENST00000618834 TTF1Q15361 905 aaPredicted RBP13.05□□□□□ -0.32
PCDHA4-204ENST00000618834 EFCAB5A4FU69 1503 aa13.05□□□□□ -0.32
PCDHA4-204ENST00000618834 C9orf84Q5VXU9 1444 aa13.05□□□□□ -0.32
PCDHA4-204ENST00000618834 RFC1P35251 1148 aaPredicted RBP13.05□□□□□ -0.32
PCDHA4-204ENST00000618834 SLFN5Q08AF3 891 aa13.05□□□□□ -0.32
PCDHA4-204ENST00000618834 IDEP14735 1019 aa13.04□□□□□ -0.32
PCDHA4-204ENST00000618834 METAP2P50579 478 aaKnown RBP eCLIP13.04□□□□□ -0.32
PCDHA4-204ENST00000618834 PPP1R7Q15435 360 aa13.04□□□□□ -0.32
PCDHA4-204ENST00000618834 USP37Q86T82 979 aa13.04□□□□□ -0.32
PCDHA4-204ENST00000618834 ABCC11Q96J66 1382 aa13.04□□□□□ -0.32
PCDHA4-204ENST00000618834 CCDC25Q86WR0 208 aa13.04□□□□□ -0.32
PCDHA4-204ENST00000618834 EEF2P13639 858 aaKnown RBP13.04□□□□□ -0.32
PCDHA4-204ENST00000618834 AOPEPQ8N6M6 819 aa13.04□□□□□ -0.32
PCDHA4-204ENST00000618834 SPAG5Q96R06 1193 aa13.04□□□□□ -0.32
PCDHA4-204ENST00000618834 TFIP11Q9UBB9 837 aaKnown RBP13.04□□□□□ -0.32
PCDHA4-204ENST00000618834 TMEM67Q5HYA8 995 aa13.04□□□□□ -0.32
PCDHA4-204ENST00000618834 CCDC62Q6P9F0 684 aa13.04□□□□□ -0.32
PCDHA4-204ENST00000618834 RTL1A6NKG5 1358 aa13.04□□□□□ -0.32
PCDHA4-204ENST00000618834 KIAA1107Q9UPP5 1409 aa13.04□□□□□ -0.32
PCDHA4-204ENST00000618834 INPP5BP32019 993 aa13.04□□□□□ -0.32
PCDHA4-204ENST00000618834 HPDP32754 393 aaPredicted RBP13.04□□□□□ -0.32
PCDHA4-204ENST00000618834 SPAG1Q07617 926 aa13.04□□□□□ -0.32
PCDHA4-204ENST00000618834 PHLDB2Q86SQ0 1253 aa13.04□□□□□ -0.32
PCDHA4-204ENST00000618834 CCDC82Q8N4S0 544 aa13.04□□□□□ -0.32
PCDHA4-204ENST00000618834 NEDD9Q14511 834 aa13.04□□□□□ -0.32
PCDHA4-204ENST00000618834 MMRN2Q9H8L6 949 aa13.04□□□□□ -0.32
PCDHA4-204ENST00000618834 SLC5A1P13866 664 aa13.04□□□□□ -0.32
PCDHA4-204ENST00000618834 FAM160A1Q05DH4 1040 aa13.04□□□□□ -0.32
PCDHA4-204ENST00000618834 TBC1D32Q96NH3 1257 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms