RNA–Protein interactions for RNA: ENST00000617948.4

DEF8-229, Transcript of differentially expressed in FDCP 8 homolog, humanhuman

APPRIS P4 TSL 5 BASIC

Gene DEF8, Length 3,883 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF8-229ENST00000617948 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.36□□□□□ -0.271e-6■■■■□ 25.4
DEF8-229ENST00000617948 EYA2O00167 538 aa13.36□□□□□ -0.27
DEF8-229ENST00000617948 SPATA31A5Q5VU36 1347 aa13.35□□□□□ -0.27
DEF8-229ENST00000617948 SPATA31A7Q8IWB4 1347 aa13.35□□□□□ -0.27
DEF8-229ENST00000617948 PXDNQ92626 1479 aa13.35□□□□□ -0.27
DEF8-229ENST00000617948 VPS72Q15906 364 aa13.35□□□□□ -0.27
DEF8-229ENST00000617948 CYP19A1P11511 503 aaPredicted RBP13.35□□□□□ -0.27
DEF8-229ENST00000617948 TDO2P48775 406 aa13.35□□□□□ -0.27
DEF8-229ENST00000617948 RAB11FIP4Q86YS3 637 aa13.35□□□□□ -0.27
DEF8-229ENST00000617948 FAM184AQ8NB25 1140 aa13.35□□□□□ -0.27
DEF8-229ENST00000617948 CPLX1O14810 134 aa13.35□□□□□ -0.27
DEF8-229ENST00000617948 PTMAP06454 111 aaKnown RBP13.35□□□□□ -0.27
DEF8-229ENST00000617948 IL6STP40189 918 aaPredicted RBP13.35□□□□□ -0.27
DEF8-229ENST00000617948 ATP2B2Q01814 1243 aa13.35□□□□□ -0.27
DEF8-229ENST00000617948 HSP90AA2PQ14568 343 aaPredicted RBP13.35□□□□□ -0.27
DEF8-229ENST00000617948 TLR7Q9NYK1 1049 aaKnown RBP13.35□□□□□ -0.27
DEF8-229ENST00000617948 DHX16O60231 1041 aaKnown RBP13.34□□□□□ -0.27
DEF8-229ENST00000617948 PDE8AO60658 829 aa13.34□□□□□ -0.27
DEF8-229ENST00000617948 CASTP20810 708 aaKnown RBP13.34□□□□□ -0.27
DEF8-229ENST00000617948 LRRC2Q9BYS8 371 aa13.34□□□□□ -0.27
DEF8-229ENST00000617948 PARP3Q9Y6F1 533 aa13.34□□□□□ -0.27
DEF8-229ENST00000617948 COL3A1P02461 1466 aaPredicted RBP13.34□□□□□ -0.27
DEF8-229ENST00000617948 ITPK1Q13572 414 aa13.34□□□□□ -0.27
DEF8-229ENST00000617948 PIBF1Q8WXW3 757 aa13.34□□□□□ -0.27
DEF8-229ENST00000617948 MSNP26038 577 aaKnown RBP13.33□□□□□ -0.28
DEF8-229ENST00000617948 MRE11P49959 708 aa13.33□□□□□ -0.28
DEF8-229ENST00000617948 EN1Q05925 392 aaPredicted RBP13.33□□□□□ -0.28
DEF8-229ENST00000617948 SUSD4Q5VX71 490 aa13.33□□□□□ -0.28
DEF8-229ENST00000617948 NLRP10Q86W26 655 aa13.33□□□□□ -0.28
DEF8-229ENST00000617948 ZSCAN29Q8IWY8 852 aaPredicted RBP13.33□□□□□ -0.28
DEF8-229ENST00000617948 CCDC82Q8N4S0 544 aa13.33□□□□□ -0.28
DEF8-229ENST00000617948 MIGA1Q8NAN2 632 aa13.33□□□□□ -0.28
DEF8-229ENST00000617948 SSH3Q8TE77 659 aa13.33□□□□□ -0.28
DEF8-229ENST00000617948 RBM6P78332 1123 aaKnown RBP13.33□□□□□ -0.28
DEF8-229ENST00000617948 SLC9C2Q5TAH2 1124 aa13.33□□□□□ -0.28
DEF8-229ENST00000617948 CCDC129Q6ZRS4 1044 aa13.33□□□□□ -0.28
DEF8-229ENST00000617948 NCOA3Q9Y6Q9 1424 aa13.33□□□□□ -0.28
DEF8-229ENST00000617948 TNNI3KQ59H18 835 aa13.33□□□□□ -0.28
DEF8-229ENST00000617948 ZBTB38Q8NAP3 1195 aaPredicted RBP13.33□□□□□ -0.28
DEF8-229ENST00000617948 STK32BQ9NY57 414 aa13.33□□□□□ -0.28
DEF8-229ENST00000617948 FPGT-TNNI3KV9GXZ4 949 aa13.33□□□□□ -0.28
DEF8-229ENST00000617948 H3BQV1 296 aa13.32□□□□□ -0.28
DEF8-229ENST00000617948 IFFO2Q5TF58 517 aa13.32□□□□□ -0.28
DEF8-229ENST00000617948 CPDO75976 1380 aa13.32□□□□□ -0.28
DEF8-229ENST00000617948 CPA1P15085 419 aa13.32□□□□□ -0.28
DEF8-229ENST00000617948 DZIP1Q86YF9 867 aaKnown RBP13.32□□□□□ -0.28
DEF8-229ENST00000617948 EVI5LQ96CN4 794 aa13.32□□□□□ -0.28
DEF8-229ENST00000617948 TRIM34Q9BYJ4 488 aa13.32□□□□□ -0.28
DEF8-229ENST00000617948 HIP1O00291 1037 aa13.32□□□□□ -0.28
DEF8-229ENST00000617948 ERFEQ4G0M1 354 aa13.32□□□□□ -0.28
DEF8-229ENST00000617948 UBE2Q2Q8WVN8 375 aa13.32□□□□□ -0.28
DEF8-229ENST00000617948 SPATA31A6Q5VVP1 1343 aa13.31□□□□□ -0.28
DEF8-229ENST00000617948 PARP10Q53GL7 1025 aa13.31□□□□□ -0.28
DEF8-229ENST00000617948 FAM227BQ96M60 508 aa13.31□□□□□ -0.28
DEF8-229ENST00000617948 XRCC6P12956 609 aaKnown RBP eCLIP13.31□□□□□ -0.28
DEF8-229ENST00000617948 PI16Q6UXB8 463 aa13.31□□□□□ -0.28
DEF8-229ENST00000617948 MPNDQ8N594 471 aa13.31□□□□□ -0.28
DEF8-229ENST00000617948 XAGE2Q96GT9 111 aa13.31□□□□□ -0.28
DEF8-229ENST00000617948 NYXQ9GZU5 481 aa13.31□□□□□ -0.28
DEF8-229ENST00000617948 RRAGDQ9NQL2 400 aaPredicted RBP13.31□□□□□ -0.28
DEF8-229ENST00000617948 CTSWP56202 376 aa13.31□□□□□ -0.28
DEF8-229ENST00000617948 MAP3K12Q12852 859 aa13.31□□□□□ -0.28
DEF8-229ENST00000617948 AMOTL1Q8IY63 956 aa13.31□□□□□ -0.28
DEF8-229ENST00000617948 SMC3Q9UQE7 1217 aa13.31□□□□□ -0.28
DEF8-229ENST00000617948 GSPT1P15170 499 aaKnown RBP13.3□□□□□ -0.28
DEF8-229ENST00000617948 ATP2B1P20020 1258 aa13.3□□□□□ -0.28
DEF8-229ENST00000617948 BAG6P46379 1132 aa13.3□□□□□ -0.28
DEF8-229ENST00000617948 NMIQ13287 307 aaPredicted RBP13.3□□□□□ -0.28
DEF8-229ENST00000617948 BLOC1S2Q6QNY1 142 aa13.3□□□□□ -0.28
DEF8-229ENST00000617948 SYNE3Q6ZMZ3 975 aa13.3□□□□□ -0.28
DEF8-229ENST00000617948 CHST3Q7LGC8 479 aa13.3□□□□□ -0.28
DEF8-229ENST00000617948 ARHGEF1Q92888 912 aaKnown RBP13.3□□□□□ -0.28
DEF8-229ENST00000617948 CYP46A1Q9Y6A2 500 aa13.3□□□□□ -0.28
DEF8-229ENST00000617948 ADCY9O60503 1353 aa13.3□□□□□ -0.28
DEF8-229ENST00000617948 NRKQ7Z2Y5 1582 aa13.3□□□□□ -0.28
DEF8-229ENST00000617948 BRPF1P55201 1214 aaPredicted RBP13.3□□□□□ -0.28
DEF8-229ENST00000617948 GRPEL1Q9HAV7 217 aa13.3□□□□□ -0.28
DEF8-229ENST00000617948 CEMIPQ8WUJ3 1361 aa13.3□□□□□ -0.28
DEF8-229ENST00000617948 ADORA1P30542 326 aa13.3□□□□□ -0.28
DEF8-229ENST00000617948 PDIA6Q15084 440 aa13.3□□□□□ -0.28
DEF8-229ENST00000617948 TXNRD1Q16881 649 aa13.3□□□□□ -0.28
DEF8-229ENST00000617948 DEFB132Q7Z7B7 95 aa13.3□□□□□ -0.28
DEF8-229ENST00000617948 PAG1Q9NWQ8 432 aa13.3□□□□□ -0.28
DEF8-229ENST00000617948 ATF5Q9Y2D1 282 aaPredicted RBP13.3□□□□□ -0.28
DEF8-229ENST00000617948 GYG1P46976 350 aa13.29□□□□□ -0.28
DEF8-229ENST00000617948 DNTTIP2Q5QJE6 756 aaKnown RBP13.29□□□□□ -0.28
DEF8-229ENST00000617948 DDX11Q96FC9 970 aa13.29□□□□□ -0.28
DEF8-229ENST00000617948 NUP133Q8WUM0 1156 aa13.29□□□□□ -0.28
DEF8-229ENST00000617948 PCCAP05165 728 aaPredicted RBP13.29□□□□□ -0.28
DEF8-229ENST00000617948 RPS8P62241 208 aaKnown RBP13.29□□□□□ -0.28
DEF8-229ENST00000617948 RABEP1Q15276 862 aa13.29□□□□□ -0.28
DEF8-229ENST00000617948 COL5A2P05997 1499 aaPredicted RBP13.29□□□□□ -0.28
DEF8-229ENST00000617948 ERICH2A1L162 156 aa13.28□□□□□ -0.28
DEF8-229ENST00000617948 GPR101Q96P66 508 aaPredicted RBP13.28□□□□□ -0.28
DEF8-229ENST00000617948 SEC62Q99442 399 aaKnown RBP13.28□□□□□ -0.28
DEF8-229ENST00000617948 NAPBQ9H115 298 aa13.28□□□□□ -0.28
DEF8-229ENST00000617948 CAMTA1Q9Y6Y1 1673 aa13.28□□□□□ -0.28
DEF8-229ENST00000617948 SKOR2Q2VWA4 1001 aaPredicted RBP13.28□□□□□ -0.28
DEF8-229ENST00000617948 ESYT1Q9BSJ8 1104 aa13.28□□□□□ -0.28
DEF8-229ENST00000617948 ZC3H12CQ9C0D7 883 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms