RNA–Protein interactions for RNA: ENST00000617848.4

CNTNAP3B-213, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 290 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-213ENST00000617848 CHMP3Q9Y3E7 222 aa10.72□□□□□ -0.69
CNTNAP3B-213ENST00000617848 RREB1Q92766 1687 aa10.72□□□□□ -0.69
CNTNAP3B-213ENST00000617848 IRS4O14654 1257 aaPredicted RBP10.71□□□□□ -0.69
CNTNAP3B-213ENST00000617848 PDE8AO60658 829 aa10.71□□□□□ -0.69
CNTNAP3B-213ENST00000617848 IFIT2P09913 472 aaKnown RBP10.71□□□□□ -0.69
CNTNAP3B-213ENST00000617848 HSP90B1P14625 803 aaKnown RBP10.71□□□□□ -0.69
CNTNAP3B-213ENST00000617848 SDSP20132 328 aa10.71□□□□□ -0.69
CNTNAP3B-213ENST00000617848 KLHDC4Q8TBB5 520 aa10.71□□□□□ -0.69
CNTNAP3B-213ENST00000617848 AK7Q96M32 723 aa10.71□□□□□ -0.69
CNTNAP3B-213ENST00000617848 UTP14AQ9BVJ6 771 aaKnown RBP10.71□□□□□ -0.69
CNTNAP3B-213ENST00000617848 SIL1Q9H173 461 aa10.71□□□□□ -0.69
CNTNAP3B-213ENST00000617848 BTAF1O14981 1849 aa10.7□□□□□ -0.7
CNTNAP3B-213ENST00000617848 TTC41PQ6P2S7 1318 aa10.7□□□□□ -0.7
CNTNAP3B-213ENST00000617848 USP42Q9H9J4 1324 aaKnown RBP10.7□□□□□ -0.7
CNTNAP3B-213ENST00000617848 ERC2O15083 957 aa10.7□□□□□ -0.7
CNTNAP3B-213ENST00000617848 GALR2O43603 387 aaPredicted RBP10.7□□□□□ -0.7
CNTNAP3B-213ENST00000617848 TRIM37O94972 964 aa10.7□□□□□ -0.7
CNTNAP3B-213ENST00000617848 IL15P40933 162 aaPredicted RBP10.7□□□□□ -0.7
CNTNAP3B-213ENST00000617848 CCDC57Q2TAC2 916 aa10.7□□□□□ -0.7
CNTNAP3B-213ENST00000617848 SLC27A3Q5K4L6 730 aa10.7□□□□□ -0.7
CNTNAP3B-213ENST00000617848 SUSD4Q5VX71 490 aa10.7□□□□□ -0.7
CNTNAP3B-213ENST00000617848 TBC1D9Q6ZT07 1266 aa10.7□□□□□ -0.7
CNTNAP3B-213ENST00000617848 GPATCH3Q96I76 525 aa10.7□□□□□ -0.7
CNTNAP3B-213ENST00000617848 NARFQ9UHQ1 456 aa10.7□□□□□ -0.7
CNTNAP3B-213ENST00000617848 NIP7Q9Y221 180 aaKnown RBP eCLIP10.7□□□□□ -0.7
CNTNAP3B-213ENST00000617848 RTCBQ9Y3I0 505 aaKnown RBP10.7□□□□□ -0.7
CNTNAP3B-213ENST00000617848 UBN2Q6ZU65 1347 aa10.69□□□□□ -0.7
CNTNAP3B-213ENST00000617848 SH3TC1Q8TE82 1336 aa10.69□□□□□ -0.7
CNTNAP3B-213ENST00000617848 MYH14Q7Z406 1995 aaKnown RBP10.69□□□□□ -0.7
CNTNAP3B-213ENST00000617848 EYA2O00167 538 aa10.69□□□□□ -0.7
CNTNAP3B-213ENST00000617848 GNPATO15228 680 aa10.69□□□□□ -0.7
CNTNAP3B-213ENST00000617848 CIAO1O76071 339 aa10.69□□□□□ -0.7
CNTNAP3B-213ENST00000617848 MFAP1P55081 439 aaKnown RBP10.69□□□□□ -0.7
CNTNAP3B-213ENST00000617848 TFCP2Q12800 502 aa10.69□□□□□ -0.7
CNTNAP3B-213ENST00000617848 CASC1Q6TDU7 716 aa10.69□□□□□ -0.7
CNTNAP3B-213ENST00000617848 AACSQ86V21 672 aa10.69□□□□□ -0.7
CNTNAP3B-213ENST00000617848 SYNE4Q8N205 404 aa10.69□□□□□ -0.7
CNTNAP3B-213ENST00000617848 TTLL11Q8NHH1 800 aa10.69□□□□□ -0.7
CNTNAP3B-213ENST00000617848 EAF2Q96CJ1 260 aaPredicted RBP10.69□□□□□ -0.7
CNTNAP3B-213ENST00000617848 DDRGK1Q96HY6 314 aa10.69□□□□□ -0.7
CNTNAP3B-213ENST00000617848 SBF2Q86WG5 1849 aa10.68□□□□□ -0.7
CNTNAP3B-213ENST00000617848 COL5A3P25940 1745 aaPredicted RBP10.68□□□□□ -0.7
CNTNAP3B-213ENST00000617848 TRIM6-TRIM34B2RNG4 842 aa10.68□□□□□ -0.7
CNTNAP3B-213ENST00000617848 ZPR1O75312 459 aa10.68□□□□□ -0.7
CNTNAP3B-213ENST00000617848 GLRX3O76003 335 aaKnown RBP10.68□□□□□ -0.7
CNTNAP3B-213ENST00000617848 CTSWP56202 376 aa10.68□□□□□ -0.7
CNTNAP3B-213ENST00000617848 IFIT5Q13325 482 aaKnown RBP10.68□□□□□ -0.7
CNTNAP3B-213ENST00000617848 TAF7LQ5H9L4 462 aa10.68□□□□□ -0.7
CNTNAP3B-213ENST00000617848 TRAPPC3LQ5T215 181 aa10.68□□□□□ -0.7
CNTNAP3B-213ENST00000617848 TSHZ3Q63HK5 1081 aa10.68□□□□□ -0.7
CNTNAP3B-213ENST00000617848 ATG9AQ7Z3C6 839 aa10.68□□□□□ -0.7
CNTNAP3B-213ENST00000617848 PI4K2BQ8TCG2 481 aa10.68□□□□□ -0.7
CNTNAP3B-213ENST00000617848 ZNF594Q96JF6 807 aaPredicted RBP10.68□□□□□ -0.7
CNTNAP3B-213ENST00000617848 IPO9Q96P70 1041 aaKnown RBP10.68□□□□□ -0.7
CNTNAP3B-213ENST00000617848 CCDC8Q9H0W5 538 aaPredicted RBP10.68□□□□□ -0.7
CNTNAP3B-213ENST00000617848 GPR108Q9NPR9 543 aa10.68□□□□□ -0.7
CNTNAP3B-213ENST00000617848 ECHDC1Q9NTX5 307 aa10.68□□□□□ -0.7
CNTNAP3B-213ENST00000617848 NUP98P52948 1817 aa10.68□□□□□ -0.7
CNTNAP3B-213ENST00000617848 ANKRD18BA2A2Z9 1011 aa10.67□□□□□ -0.7
CNTNAP3B-213ENST00000617848 FAM177BA6PVY3 158 aa10.67□□□□□ -0.7
CNTNAP3B-213ENST00000617848 NTSR2O95665 410 aa10.67□□□□□ -0.7
CNTNAP3B-213ENST00000617848 TNNI3KQ59H18 835 aa10.67□□□□□ -0.7
CNTNAP3B-213ENST00000617848 RASEFQ8IZ41 740 aa10.67□□□□□ -0.7
CNTNAP3B-213ENST00000617848 ARHGEF1Q92888 912 aaKnown RBP10.67□□□□□ -0.7
CNTNAP3B-213ENST00000617848 RILPL2Q969X0 211 aa10.67□□□□□ -0.7
CNTNAP3B-213ENST00000617848 TBC1D32Q96NH3 1257 aa10.67□□□□□ -0.7
CNTNAP3B-213ENST00000617848 C22orf23Q9BZE7 217 aa10.67□□□□□ -0.7
CNTNAP3B-213ENST00000617848 BCL2L12Q9HB09 334 aa10.67□□□□□ -0.7
CNTNAP3B-213ENST00000617848 LRRC4BQ9NT99 713 aa10.67□□□□□ -0.7
CNTNAP3B-213ENST00000617848 FPGT-TNNI3KV9GXZ4 949 aa10.67□□□□□ -0.7
CNTNAP3B-213ENST00000617848 ITGA6P23229 1130 aa10.66□□□□□ -0.7
CNTNAP3B-213ENST00000617848 RFC4P35249 363 aa10.66□□□□□ -0.7
CNTNAP3B-213ENST00000617848 LRRC24Q50LG9 513 aa10.66□□□□□ -0.7
CNTNAP3B-213ENST00000617848 USPL1Q5W0Q7 1092 aa10.66□□□□□ -0.7
CNTNAP3B-213ENST00000617848 CNTROBQ8N137 903 aa10.66□□□□□ -0.7
CNTNAP3B-213ENST00000617848 CEP126Q9P2H0 1117 aa10.66□□□□□ -0.7
CNTNAP3B-213ENST00000617848 SRP68Q9UHB9 627 aaKnown RBP10.66□□□□□ -0.7
CNTNAP3B-213ENST00000617848 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.66□□□□□ -0.7
CNTNAP3B-213ENST00000617848 ANKRD36CQ5JPF3 1778 aa10.66□□□□□ -0.7
CNTNAP3B-213ENST00000617848 LY75O60449 1722 aa10.66□□□□□ -0.7
CNTNAP3B-213ENST00000617848 PLSCR1O15162 318 aa10.65□□□□□ -0.7
CNTNAP3B-213ENST00000617848 POTEIP0CG38 1075 aa10.65□□□□□ -0.7
CNTNAP3B-213ENST00000617848 HCLS1P14317 486 aaPredicted RBP10.65□□□□□ -0.7
CNTNAP3B-213ENST00000617848 VASPP50552 380 aaPredicted RBP10.65□□□□□ -0.7
CNTNAP3B-213ENST00000617848 TXNRD1Q16881 649 aa10.65□□□□□ -0.7
CNTNAP3B-213ENST00000617848 SLC10A5Q5PT55 438 aa10.65□□□□□ -0.7
CNTNAP3B-213ENST00000617848 TBC1D9BQ66K14 1250 aa10.65□□□□□ -0.7
CNTNAP3B-213ENST00000617848 SMIM5Q71RC9 77 aa10.65□□□□□ -0.7
CNTNAP3B-213ENST00000617848 CCDC85AQ96PX6 553 aaPredicted RBP10.65□□□□□ -0.7
CNTNAP3B-213ENST00000617848 SETDB2Q96T68 719 aa10.65□□□□□ -0.7
CNTNAP3B-213ENST00000617848 PUS3Q9BZE2 481 aaKnown RBP10.65□□□□□ -0.7
CNTNAP3B-213ENST00000617848 NYXQ9GZU5 481 aa10.65□□□□□ -0.7
CNTNAP3B-213ENST00000617848 GREM2Q9H772 168 aa10.65□□□□□ -0.7
CNTNAP3B-213ENST00000617848 RGS17Q9UGC6 210 aaPredicted RBP10.65□□□□□ -0.7
CNTNAP3B-213ENST00000617848 AKAP2Q9Y2D5 859 aa10.65□□□□□ -0.7
CNTNAP3B-213ENST00000617848 BRWD3Q6RI45 1802 aa10.65□□□□□ -0.71
CNTNAP3B-213ENST00000617848 ATP5JP18859 108 aa10.64□□□□□ -0.71
CNTNAP3B-213ENST00000617848 CHMLP26374 656 aa10.64□□□□□ -0.71
CNTNAP3B-213ENST00000617848 CCDC152Q4G0S7 254 aa10.64□□□□□ -0.71
CNTNAP3B-213ENST00000617848 POTEAQ6S8J7 498 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms