RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 CTSWP56202 376 aa20.17■□□□□ 0.82
SNAP47-213ENST00000617596 FLAD1Q8NFF5 587 aa20.17■□□□□ 0.82
SNAP47-213ENST00000617596 C3orf67Q6ZVT6 689 aa20.16■□□□□ 0.82
SNAP47-213ENST00000617596 TTLL11Q8NHH1 800 aa20.16■□□□□ 0.82
SNAP47-213ENST00000617596 ZNF594Q96JF6 807 aaPredicted RBP20.16■□□□□ 0.82
SNAP47-213ENST00000617596 ABCC12Q96J65 1359 aa20.16■□□□□ 0.82
SNAP47-213ENST00000617596 NPHP1O15259 732 aa20.15■□□□□ 0.82
SNAP47-213ENST00000617596 PDE8AO60658 829 aa20.15■□□□□ 0.82
SNAP47-213ENST00000617596 TM4SF1P30408 202 aa20.15■□□□□ 0.82
SNAP47-213ENST00000617596 DDR1Q08345 913 aa20.15■□□□□ 0.82
SNAP47-213ENST00000617596 CHD1LQ86WJ1 897 aa20.15■□□□□ 0.82
SNAP47-213ENST00000617596 GREM2Q9H772 168 aa20.15■□□□□ 0.82
SNAP47-213ENST00000617596 CARMIL3Q8ND23 1372 aa20.15■□□□□ 0.82
SNAP47-213ENST00000617596 CSF1RP07333 972 aa20.15■□□□□ 0.82
SNAP47-213ENST00000617596 PTPN12Q05209 780 aaKnown RBP20.15■□□□□ 0.82
SNAP47-213ENST00000617596 TPTE2Q6XPS3 522 aa20.15■□□□□ 0.82
SNAP47-213ENST00000617596 PDE4AP27815 886 aa20.14■□□□□ 0.81
SNAP47-213ENST00000617596 C16orf71Q8IYS4 520 aaPredicted RBP20.14■□□□□ 0.81
SNAP47-213ENST00000617596 OS9Q13438 667 aaPredicted RBP20.14■□□□□ 0.81
SNAP47-213ENST00000617596 NYXQ9GZU5 481 aa20.14■□□□□ 0.81
SNAP47-213ENST00000617596 SERPINB2P05120 415 aa20.13■□□□□ 0.81
SNAP47-213ENST00000617596 IL1RAPL2Q9NP60 686 aa20.13■□□□□ 0.81
SNAP47-213ENST00000617596 ITGA6P23229 1130 aa20.12■□□□□ 0.81
SNAP47-213ENST00000617596 CCDC57Q2TAC2 916 aa20.12■□□□□ 0.81
SNAP47-213ENST00000617596 NLGN1Q8N2Q7 840 aa20.12■□□□□ 0.81
SNAP47-213ENST00000617596 CNBD1Q8NA66 436 aa20.12■□□□□ 0.81
SNAP47-213ENST00000617596 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.12■□□□□ 0.81
SNAP47-213ENST00000617596 COL24A1Q17RW2 1714 aa20.12■□□□□ 0.81
SNAP47-213ENST00000617596 POLRMTO00411 1230 aaKnown RBP20.12■□□□□ 0.81
SNAP47-213ENST00000617596 PRR5LQ6MZQ0 368 aa20.12■□□□□ 0.81
SNAP47-213ENST00000617596 LRRCC1Q9C099 1032 aa20.12■□□□□ 0.81
SNAP47-213ENST00000617596 IFIT5Q13325 482 aaKnown RBP20.11■□□□□ 0.81
SNAP47-213ENST00000617596 OTUD7AQ8TE49 926 aaPredicted RBP20.11■□□□□ 0.81
SNAP47-213ENST00000617596 COPRSQ9NQ92 184 aa20.11■□□□□ 0.81
SNAP47-213ENST00000617596 SEC31BQ9NQW1 1179 aa20.11■□□□□ 0.81
SNAP47-213ENST00000617596 MMP10P09238 476 aa20.1■□□□□ 0.81
SNAP47-213ENST00000617596 G3BP1Q13283 466 aaKnown RBP eCLIP20.1■□□□□ 0.81
SNAP47-213ENST00000617596 RHPN1Q8TCX5 695 aa20.1■□□□□ 0.81
SNAP47-213ENST00000617596 PUS3Q9BZE2 481 aaKnown RBP20.1■□□□□ 0.81
SNAP47-213ENST00000617596 DDX60Q8IY21 1712 aaKnown RBP20.1■□□□□ 0.81
SNAP47-213ENST00000617596 LRRC24Q50LG9 513 aa20.1■□□□□ 0.81
SNAP47-213ENST00000617596 SASH1O94885 1247 aa20.09■□□□□ 0.81
SNAP47-213ENST00000617596 SLC10A5Q5PT55 438 aa20.09■□□□□ 0.81
SNAP47-213ENST00000617596 ZBTB47Q9UFB7 747 aaPredicted RBP20.09■□□□□ 0.81
SNAP47-213ENST00000617596 TAF7LQ5H9L4 462 aa20.08■□□□□ 0.81
SNAP47-213ENST00000617596 ANKRD18BA2A2Z9 1011 aa20.08■□□□□ 0.8
SNAP47-213ENST00000617596 RAB11FIP3O75154 756 aa20.08■□□□□ 0.8
SNAP47-213ENST00000617596 CCDC152Q4G0S7 254 aa20.07■□□□□ 0.8
SNAP47-213ENST00000617596 HSP90AB4PQ58FF6 505 aa20.07■□□□□ 0.8
SNAP47-213ENST00000617596 KIF1BPQ96EK5 621 aa20.07■□□□□ 0.8
SNAP47-213ENST00000617596 NLRP3Q96P20 1036 aa20.07■□□□□ 0.8
SNAP47-213ENST00000617596 HSP90B1P14625 803 aaKnown RBP20.06■□□□□ 0.8
SNAP47-213ENST00000617596 ATG9AQ7Z3C6 839 aa20.06■□□□□ 0.8
SNAP47-213ENST00000617596 R3HDM1Q15032 1099 aaKnown RBP20.06■□□□□ 0.8
SNAP47-213ENST00000617596 MYH3P11055 1940 aa20.05■□□□□ 0.8
SNAP47-213ENST00000617596 EYA2O00167 538 aa20.05■□□□□ 0.8
SNAP47-213ENST00000617596 ST5P78524 1137 aa20.05■□□□□ 0.8
SNAP47-213ENST00000617596 TFCP2Q12800 502 aa20.05■□□□□ 0.8
SNAP47-213ENST00000617596 NBR1Q14596 966 aa20.05■□□□□ 0.8
SNAP47-213ENST00000617596 SF3B3Q15393 1217 aaKnown RBP20.05■□□□□ 0.8
SNAP47-213ENST00000617596 PARP3Q9Y6F1 533 aa20.05■□□□□ 0.8
SNAP47-213ENST00000617596 COL4A1P02462 1669 aa20.05■□□□□ 0.8
SNAP47-213ENST00000617596 TSHZ3Q63HK5 1081 aa20.04■□□□□ 0.8
SNAP47-213ENST00000617596 LDHAL6AQ6ZMR3 332 aa20.04■□□□□ 0.8
SNAP47-213ENST00000617596 ERC1Q8IUD2 1116 aa20.04■□□□□ 0.8
SNAP47-213ENST00000617596 TNRC6CQ9HCJ0 1690 aaKnown RBP20.04■□□□□ 0.8
SNAP47-213ENST00000617596 LAMB2P55268 1798 aa20.03■□□□□ 0.8
SNAP47-213ENST00000617596 PLEKHM2Q8IWE5 1019 aa20.03■□□□□ 0.8
SNAP47-213ENST00000617596 PSDA5PKW4 1024 aaPredicted RBP20.02■□□□□ 0.8
SNAP47-213ENST00000617596 ZBTB7AO95365 584 aa20.02■□□□□ 0.8
SNAP47-213ENST00000617596 CNNM1Q9NRU3 951 aa20.02■□□□□ 0.8
SNAP47-213ENST00000617596 CELF1Q92879 486 aaKnown RBP20.02■□□□□ 0.79
SNAP47-213ENST00000617596 EAF2Q96CJ1 260 aaPredicted RBP20.02■□□□□ 0.79
SNAP47-213ENST00000617596 IL15P40933 162 aaPredicted RBP20.01■□□□□ 0.79
SNAP47-213ENST00000617596 AACSQ86V21 672 aa20.01■□□□□ 0.79
SNAP47-213ENST00000617596 CLASRPQ8N2M8 674 aaKnown RBP20.01■□□□□ 0.79
SNAP47-213ENST00000617596 CCDC8Q9H0W5 538 aaPredicted RBP20.01■□□□□ 0.79
SNAP47-213ENST00000617596 TLR7Q9NYK1 1049 aaKnown RBP20.01■□□□□ 0.79
SNAP47-213ENST00000617596 QSER1Q2KHR3 1735 aa20.01■□□□□ 0.79
SNAP47-213ENST00000617596 CIAO1O76071 339 aa20■□□□□ 0.79
SNAP47-213ENST00000617596 MPHOSPH8Q99549 860 aa20■□□□□ 0.79
SNAP47-213ENST00000617596 RIPOR2Q9Y4F9 1068 aa20■□□□□ 0.79
SNAP47-213ENST00000617596 RTL9Q8NET4 1388 aa20■□□□□ 0.79
SNAP47-213ENST00000617596 SLC51AQ86UW1 340 aa20■□□□□ 0.79
SNAP47-213ENST00000617596 HELBQ8NG08 1087 aaPredicted RBP20■□□□□ 0.79
SNAP47-213ENST00000617596 TAF1P21675 1872 aa19.99■□□□□ 0.79
SNAP47-213ENST00000617596 GOLGB1Q14789 3259 aaKnown RBP19.99■□□□□ 0.79
SNAP47-213ENST00000617596 ATF5Q9Y2D1 282 aaPredicted RBP19.99■□□□□ 0.79
SNAP47-213ENST00000617596 IGHMBP2P38935 993 aaKnown RBP19.98■□□□□ 0.79
SNAP47-213ENST00000617596 CDC5LQ99459 802 aaKnown RBP19.98■□□□□ 0.79
SNAP47-213ENST00000617596 SALL3Q9BXA9 1300 aa19.98■□□□□ 0.79
SNAP47-213ENST00000617596 CASZ1Q86V15 1759 aa19.98■□□□□ 0.79
SNAP47-213ENST00000617596 MX1P20591 662 aa19.98■□□□□ 0.79
SNAP47-213ENST00000617596 TNNI3KQ59H18 835 aa19.98■□□□□ 0.79
SNAP47-213ENST00000617596 METTL24Q5JXM2 366 aa19.98■□□□□ 0.79
SNAP47-213ENST00000617596 DDX46Q7L014 1031 aaKnown RBP19.98■□□□□ 0.79
SNAP47-213ENST00000617596 ANKRD18AQ8IVF6 992 aa19.98■□□□□ 0.79
SNAP47-213ENST00000617596 FPGT-TNNI3KV9GXZ4 949 aa19.98■□□□□ 0.79
SNAP47-213ENST00000617596 RIC1Q4ADV7 1423 aa19.97■□□□□ 0.79
SNAP47-213ENST00000617596 IFIT2P09913 472 aaKnown RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms