RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 ADGRL2O95490 1459 aa11.75□□□□□ -0.53
CUL4A-212ENST00000617546 ZFYP08048 801 aaPredicted RBP11.75□□□□□ -0.53
CUL4A-212ENST00000617546 NCOA7Q8NI08 942 aa11.75□□□□□ -0.53
CUL4A-212ENST00000617546 AIDAQ96BJ3 306 aa11.75□□□□□ -0.53
CUL4A-212ENST00000617546 THUMPD2Q9BTF0 503 aaKnown RBP11.75□□□□□ -0.53
CUL4A-212ENST00000617546 RBM8AQ9Y5S9 174 aaKnown RBP11.75□□□□□ -0.53
CUL4A-212ENST00000617546 USP16Q9Y5T5 823 aa11.75□□□□□ -0.53
CUL4A-212ENST00000617546 RAPGEF6Q8TEU7 1601 aa11.75□□□□□ -0.53
CUL4A-212ENST00000617546 GOLGA8AA7E2F4 631 aa11.74□□□□□ -0.53
CUL4A-212ENST00000617546 ZBTB7BO15156 539 aaPredicted RBP11.74□□□□□ -0.53
CUL4A-212ENST00000617546 IFIT1P09914 478 aaKnown RBP11.74□□□□□ -0.53
CUL4A-212ENST00000617546 IARSP41252 1262 aaKnown RBP11.74□□□□□ -0.53
CUL4A-212ENST00000617546 KLHL10Q6JEL2 608 aa11.74□□□□□ -0.53
CUL4A-212ENST00000617546 CCDC155Q8N6L0 562 aa11.74□□□□□ -0.53
CUL4A-212ENST00000617546 JADE2Q9NQC1 790 aa11.74□□□□□ -0.53
CUL4A-212ENST00000617546 TTF2Q9UNY4 1162 aaKnown RBP11.74□□□□□ -0.53
CUL4A-212ENST00000617546 A0A087WZG4 1122 aa11.74□□□□□ -0.53
CUL4A-212ENST00000617546 N4BP3O15049 544 aa11.74□□□□□ -0.53
CUL4A-212ENST00000617546 ALDH1L1O75891 902 aa11.74□□□□□ -0.53
CUL4A-212ENST00000617546 TTF1Q15361 905 aaPredicted RBP11.74□□□□□ -0.53
CUL4A-212ENST00000617546 TICAM2Q86XR7 235 aa11.74□□□□□ -0.53
CUL4A-212ENST00000617546 GPR161Q8N6U8 529 aaKnown RBP11.74□□□□□ -0.53
CUL4A-212ENST00000617546 CCDC178Q5BJE1 867 aa11.74□□□□□ -0.53
CUL4A-212ENST00000617546 NUDT16Q96DE0 195 aaKnown RBP11.74□□□□□ -0.53
CUL4A-212ENST00000617546 MCM10Q7L590 875 aa11.74□□□□□ -0.53
CUL4A-212ENST00000617546 BIN1O00499 593 aa11.73□□□□□ -0.53
CUL4A-212ENST00000617546 C6orf163Q5TEZ5 329 aa11.73□□□□□ -0.53
CUL4A-212ENST00000617546 PPP1R42Q7Z4L9 355 aa11.73□□□□□ -0.53
CUL4A-212ENST00000617546 CTDP1Q9Y5B0 961 aaPredicted RBP11.73□□□□□ -0.53
CUL4A-212ENST00000617546 CDC25BP30305 580 aa11.73□□□□□ -0.53
CUL4A-212ENST00000617546 EVA1CP58658 441 aa11.73□□□□□ -0.53
CUL4A-212ENST00000617546 MYL5Q02045 173 aa11.73□□□□□ -0.53
CUL4A-212ENST00000617546 HLTFQ14527 1009 aaKnown RBP eCLIP11.73□□□□□ -0.53
CUL4A-212ENST00000617546 SPECC1Q5M775 1068 aa11.73□□□□□ -0.53
CUL4A-212ENST00000617546 TTC14Q96N46 770 aa11.73□□□□□ -0.53
CUL4A-212ENST00000617546 SELENOOQ9BVL4 669 aa11.73□□□□□ -0.53
CUL4A-212ENST00000617546 SPTLC2O15270 562 aa11.73□□□□□ -0.53
CUL4A-212ENST00000617546 VAMP4O75379 141 aa11.73□□□□□ -0.53
CUL4A-212ENST00000617546 CPLX3Q8WVH0 158 aa11.73□□□□□ -0.53
CUL4A-212ENST00000617546 RRS1Q15050 365 aaKnown RBP11.73□□□□□ -0.53
CUL4A-212ENST00000617546 ANTXR1Q9H6X2 564 aa11.73□□□□□ -0.53
CUL4A-212ENST00000617546 PZPP20742 1482 aa11.73□□□□□ -0.53
CUL4A-212ENST00000617546 PRPHP41219 470 aa11.73□□□□□ -0.53
CUL4A-212ENST00000617546 ZNF287Q9HBT7 754 aa11.73□□□□□ -0.53
CUL4A-212ENST00000617546 MTIF2P46199 727 aaKnown RBP11.72□□□□□ -0.53
CUL4A-212ENST00000617546 KCNH5Q8NCM2 988 aa11.72□□□□□ -0.53
CUL4A-212ENST00000617546 RPGRIP1Q96KN7 1286 aa11.72□□□□□ -0.53
CUL4A-212ENST00000617546 BAG1Q99933 345 aaPredicted RBP11.72□□□□□ -0.53
CUL4A-212ENST00000617546 POTEJP0CG39 1038 aa11.72□□□□□ -0.53
CUL4A-212ENST00000617546 NUTM2GQ5VZR2 741 aa11.72□□□□□ -0.53
CUL4A-212ENST00000617546 TMTC2Q8N394 836 aa11.72□□□□□ -0.53
CUL4A-212ENST00000617546 NLRP2Q9NX02 1062 aa11.72□□□□□ -0.53
CUL4A-212ENST00000617546 IFNKQ9P0W0 207 aa11.72□□□□□ -0.53
CUL4A-212ENST00000617546 ADGRF5Q8IZF2 1346 aa11.72□□□□□ -0.53
CUL4A-212ENST00000617546 ARHGAP6O43182 974 aa11.72□□□□□ -0.53
CUL4A-212ENST00000617546 GTF3C6Q969F1 213 aa11.72□□□□□ -0.53
CUL4A-212ENST00000617546 PPP1R2P41236 205 aa11.72□□□□□ -0.53
CUL4A-212ENST00000617546 NUTM2AQ8IVF1 878 aaPredicted RBP11.72□□□□□ -0.53
CUL4A-212ENST00000617546 VAV2P52735 878 aa11.71□□□□□ -0.53
CUL4A-212ENST00000617546 CYB5RLQ6IPT4 315 aa11.71□□□□□ -0.53
CUL4A-212ENST00000617546 GOLGA5Q8TBA6 731 aa11.71□□□□□ -0.53
CUL4A-212ENST00000617546 METAP2P50579 478 aaKnown RBP eCLIP11.71□□□□□ -0.53
CUL4A-212ENST00000617546 CROCCP2Q86T23 111 aa11.71□□□□□ -0.53
CUL4A-212ENST00000617546 CBX8Q9HC52 389 aa11.71□□□□□ -0.53
CUL4A-212ENST00000617546 F6X3S4 739 aa11.71□□□□□ -0.53
CUL4A-212ENST00000617546 CCDC172P0C7W6 258 aa11.71□□□□□ -0.53
CUL4A-212ENST00000617546 TMEM266Q2M3C6 531 aa11.71□□□□□ -0.53
CUL4A-212ENST00000617546 BRF1Q92994 677 aa11.71□□□□□ -0.53
CUL4A-212ENST00000617546 MEIS3Q99687 375 aa11.71□□□□□ -0.53
CUL4A-212ENST00000617546 BCCIPQ9P287 314 aaKnown RBP eCLIP11.71□□□□□ -0.537e-7■■■■■ 36.2
CUL4A-212ENST00000617546 NOS1P29475 1434 aa11.71□□□□□ -0.53
CUL4A-212ENST00000617546 CLGNO14967 610 aa11.71□□□□□ -0.54
CUL4A-212ENST00000617546 GUCY1B3Q02153 619 aa11.71□□□□□ -0.54
CUL4A-212ENST00000617546 MYCBPQ99417 103 aaPredicted RBP11.71□□□□□ -0.54
CUL4A-212ENST00000617546 TMEM63CQ9P1W3 806 aa11.71□□□□□ -0.54
CUL4A-212ENST00000617546 RASAL2Q9UJF2 1139 aa11.71□□□□□ -0.54
CUL4A-212ENST00000617546 AKR1B15C9JRZ8 316 aaPredicted RBP11.71□□□□□ -0.54
CUL4A-212ENST00000617546 ELF2Q15723 593 aa11.71□□□□□ -0.54
CUL4A-212ENST00000617546 LMBR1Q8WVP7 490 aa11.71□□□□□ -0.54
CUL4A-212ENST00000617546 EFCC1Q9HA90 598 aa11.71□□□□□ -0.54
CUL4A-212ENST00000617546 FYB1O15117 783 aa11.7□□□□□ -0.54
CUL4A-212ENST00000617546 MCMDC2Q4G0Z9 681 aa11.7□□□□□ -0.54
CUL4A-212ENST00000617546 NECAB1Q8N987 351 aa11.7□□□□□ -0.54
CUL4A-212ENST00000617546 TM6SF1Q9BZW5 370 aa11.7□□□□□ -0.54
CUL4A-212ENST00000617546 NAPBQ9H115 298 aa11.7□□□□□ -0.54
CUL4A-212ENST00000617546 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.7□□□□□ -0.54
CUL4A-212ENST00000617546 INPP5BP32019 993 aa11.7□□□□□ -0.54
CUL4A-212ENST00000617546 CHMP4BP1P59074 171 aa11.7□□□□□ -0.54
CUL4A-212ENST00000617546 CCT2P78371 535 aaKnown RBP11.7□□□□□ -0.54
CUL4A-212ENST00000617546 KIF5AQ12840 1032 aa11.7□□□□□ -0.54
CUL4A-212ENST00000617546 MRFAP1L1Q96HT8 127 aa11.7□□□□□ -0.54
CUL4A-212ENST00000617546 CCDC114Q96M63 670 aa11.7□□□□□ -0.54
CUL4A-212ENST00000617546 NAPGQ99747 312 aaPredicted RBP11.7□□□□□ -0.54
CUL4A-212ENST00000617546 SPATA24Q86W54 205 aa11.7□□□□□ -0.54
CUL4A-212ENST00000617546 TRMT2AQ8IZ69 625 aaKnown RBP11.7□□□□□ -0.54
CUL4A-212ENST00000617546 EFCAB8A8MWE9 144 aa11.7□□□□□ -0.54
CUL4A-212ENST00000617546 TDRD12Q587J7 1177 aaKnown RBP11.7□□□□□ -0.54
CUL4A-212ENST00000617546 SWAP70Q9UH65 585 aa11.7□□□□□ -0.54
CUL4A-212ENST00000617546 GRIN2AQ12879 1464 aa11.7□□□□□ -0.54
CUL4A-212ENST00000617546 LIG1P18858 919 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms