RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 EIF6P56537 245 aaKnown RBP28.72■■■□□ 2.19
NEDD4L-237ENST00000617539 ANP32CO43423 234 aa28.71■■■□□ 2.19
NEDD4L-237ENST00000617539 SF3B3Q15393 1217 aaKnown RBP28.71■■■□□ 2.19
NEDD4L-237ENST00000617539 GJA3Q9Y6H8 435 aa28.71■■■□□ 2.19
NEDD4L-237ENST00000617539 EAPPQ56P03 285 aaPredicted RBP28.7■■■□□ 2.18
NEDD4L-237ENST00000617539 CCDC30Q5VVM6 783 aa28.7■■■□□ 2.18
NEDD4L-237ENST00000617539 DPP8Q6V1X1 898 aaPredicted RBP28.7■■■□□ 2.18
NEDD4L-237ENST00000617539 NIM1KQ8IY84 436 aa28.7■■■□□ 2.18
NEDD4L-237ENST00000617539 TMX4Q9H1E5 349 aaPredicted RBP28.7■■■□□ 2.18
NEDD4L-237ENST00000617539 PASKQ96RG2 1323 aa28.69■■■□□ 2.18
NEDD4L-237ENST00000617539 IRS4O14654 1257 aaPredicted RBP28.69■■■□□ 2.18
NEDD4L-237ENST00000617539 MPNDQ8N594 471 aa28.69■■■□□ 2.18
NEDD4L-237ENST00000617539 CELF1Q92879 486 aaKnown RBP28.69■■■□□ 2.18
NEDD4L-237ENST00000617539 MYD88Q99836 296 aa28.69■■■□□ 2.18
NEDD4L-237ENST00000617539 VPS33BQ9H267 617 aa28.69■■■□□ 2.18
NEDD4L-237ENST00000617539 SCNN1DP51172 638 aa28.68■■■□□ 2.18
NEDD4L-237ENST00000617539 ITGBL1O95965 494 aaPredicted RBP28.67■■■□□ 2.18
NEDD4L-237ENST00000617539 NCBP3Q53F19 620 aaKnown RBP28.67■■■□□ 2.18
NEDD4L-237ENST00000617539 ZBTB38Q8NAP3 1195 aaPredicted RBP28.67■■■□□ 2.18
NEDD4L-237ENST00000617539 SUPT20HQ8NEM7 779 aa28.67■■■□□ 2.18
NEDD4L-237ENST00000617539 IL16Q14005 1332 aa28.67■■■□□ 2.18
NEDD4L-237ENST00000617539 KIAA2012Q0VF49 1180 aa28.65■■■□□ 2.18
NEDD4L-237ENST00000617539 TMC4Q7Z404 712 aa28.65■■■□□ 2.18
NEDD4L-237ENST00000617539 PNMA8AQ86V59 439 aaPredicted RBP28.65■■■□□ 2.18
NEDD4L-237ENST00000617539 CCDC191Q8NCU4 936 aa28.65■■■□□ 2.18
NEDD4L-237ENST00000617539 METTL22Q9BUU2 404 aaPredicted RBP28.65■■■□□ 2.18
NEDD4L-237ENST00000617539 CREBZFQ9NS37 354 aa28.65■■■□□ 2.18
NEDD4L-237ENST00000617539 EPS15P42566 896 aa28.64■■■□□ 2.18
NEDD4L-237ENST00000617539 ZNRF3Q9ULT6 936 aa28.64■■■□□ 2.18
NEDD4L-237ENST00000617539 CXCL9Q07325 125 aa28.63■■■□□ 2.17
NEDD4L-237ENST00000617539 TWISTNBQ3B726 338 aaPredicted RBP28.63■■■□□ 2.17
NEDD4L-237ENST00000617539 CHMP4AQ9BY43 222 aa28.63■■■□□ 2.17
NEDD4L-237ENST00000617539 MAP3K2Q9Y2U5 619 aa28.63■■■□□ 2.17
NEDD4L-237ENST00000617539 DDX58O95786 925 aaKnown RBP28.62■■■□□ 2.17
NEDD4L-237ENST00000617539 PCCAP05165 728 aaPredicted RBP28.62■■■□□ 2.17
NEDD4L-237ENST00000617539 MAP1SQ66K74 1059 aaPredicted RBP28.62■■■□□ 2.17
NEDD4L-237ENST00000617539 JARID2Q92833 1246 aaPredicted RBP28.62■■■□□ 2.17
NEDD4L-237ENST00000617539 CWC25Q9NXE8 425 aaPredicted RBP28.62■■■□□ 2.17
NEDD4L-237ENST00000617539 CLEC11AQ9Y240 323 aa28.62■■■□□ 2.17
NEDD4L-237ENST00000617539 FANCIQ9NVI1 1328 aa28.62■■■□□ 2.17
NEDD4L-237ENST00000617539 PI4KAP2A4QPH2 592 aa28.61■■■□□ 2.17
NEDD4L-237ENST00000617539 G2E3Q7L622 706 aa28.61■■■□□ 2.17
NEDD4L-237ENST00000617539 PI4KAP1Q8N8J0 262 aa28.61■■■□□ 2.17
NEDD4L-237ENST00000617539 IGKV5-2P06315 115 aa28.6■■■□□ 2.17
NEDD4L-237ENST00000617539 LMOD1P29536 600 aaPredicted RBP28.6■■■□□ 2.17
NEDD4L-237ENST00000617539 KSR2Q6VAB6 950 aa28.6■■■□□ 2.17
NEDD4L-237ENST00000617539 SEC31BQ9NQW1 1179 aa28.6■■■□□ 2.17
NEDD4L-237ENST00000617539 SALL2Q9Y467 1007 aaPredicted RBP28.6■■■□□ 2.17
NEDD4L-237ENST00000617539 YDJCA8MPS7 323 aa28.59■■■□□ 2.17
NEDD4L-237ENST00000617539 GPSM2P81274 684 aa28.59■■■□□ 2.17
NEDD4L-237ENST00000617539 STK31Q9BXU1 1019 aa28.59■■■□□ 2.17
NEDD4L-237ENST00000617539 MYH3P11055 1940 aa28.59■■■□□ 2.17
NEDD4L-237ENST00000617539 CNTROBQ8N137 903 aa28.58■■■□□ 2.17
NEDD4L-237ENST00000617539 GPRC5DQ9NZD1 345 aa28.58■■■□□ 2.17
NEDD4L-237ENST00000617539 CACNA1FO60840 1977 aa28.58■■■□□ 2.17
NEDD4L-237ENST00000617539 RPS8P62241 208 aaKnown RBP28.57■■■□□ 2.16
NEDD4L-237ENST00000617539 POLLQ9UGP5 575 aa28.57■■■□□ 2.16
NEDD4L-237ENST00000617539 NSFL1CQ9UNZ2 370 aaKnown RBP28.57■■■□□ 2.16
NEDD4L-237ENST00000617539 PDE8AO60658 829 aa28.56■■■□□ 2.16
NEDD4L-237ENST00000617539 RAD17O75943 681 aa28.56■■■□□ 2.16
NEDD4L-237ENST00000617539 GMPSP49915 693 aaPredicted RBP28.56■■■□□ 2.16
NEDD4L-237ENST00000617539 WDR63Q8IWG1 891 aa28.56■■■□□ 2.16
NEDD4L-237ENST00000617539 MKRN1Q9UHC7 482 aaKnown RBP28.56■■■□□ 2.16
NEDD4L-237ENST00000617539 CDHR2Q9BYE9 1310 aa28.55■■■□□ 2.16
NEDD4L-237ENST00000617539 SLC4A2P04920 1241 aa28.55■■■□□ 2.16
NEDD4L-237ENST00000617539 IFFO2Q5TF58 517 aa28.55■■■□□ 2.16
NEDD4L-237ENST00000617539 CIAPIN1Q6FI81 312 aa28.55■■■□□ 2.16
NEDD4L-237ENST00000617539 CNTNAP1P78357 1384 aa28.54■■■□□ 2.16
NEDD4L-237ENST00000617539 WASHC4Q2M389 1173 aa28.54■■■□□ 2.16
NEDD4L-237ENST00000617539 CWF19L2Q2TBE0 894 aaKnown RBP28.54■■■□□ 2.16
NEDD4L-237ENST00000617539 USP50Q70EL3 339 aaPredicted RBP28.54■■■□□ 2.16
NEDD4L-237ENST00000617539 CCDC85AQ96PX6 553 aaPredicted RBP28.54■■■□□ 2.16
NEDD4L-237ENST00000617539 SPINK5Q9NQ38 1064 aaPredicted RBP28.54■■■□□ 2.16
NEDD4L-237ENST00000617539 SPEF2Q9C093 1822 aa28.54■■■□□ 2.16
NEDD4L-237ENST00000617539 TMEM88BA6NKF7 163 aa28.53■■■□□ 2.16
NEDD4L-237ENST00000617539 HSP90B1P14625 803 aaKnown RBP28.53■■■□□ 2.16
NEDD4L-237ENST00000617539 CCDC152Q4G0S7 254 aa28.53■■■□□ 2.16
NEDD4L-237ENST00000617539 GPR101Q96P66 508 aaPredicted RBP28.53■■■□□ 2.16
NEDD4L-237ENST00000617539 SCN9AQ15858 1988 aa28.52■■■□□ 2.16
NEDD4L-237ENST00000617539 NEURL1BA8MQ27 555 aa28.52■■■□□ 2.16
NEDD4L-237ENST00000617539 TBC1D16Q8TBP0 767 aa28.52■■■□□ 2.16
NEDD4L-237ENST00000617539 ADARB2Q9NS39 739 aaKnown RBP28.52■■■□□ 2.16
NEDD4L-237ENST00000617539 C6orf229H3BNL8 230 aa28.51■■■□□ 2.15
NEDD4L-237ENST00000617539 VAMP4O75379 141 aa28.51■■■□□ 2.15
NEDD4L-237ENST00000617539 FMR1Q06787 632 aaKnown RBP eCLIP28.51■■■□□ 2.15
NEDD4L-237ENST00000617539 FLIIQ13045 1269 aa28.51■■■□□ 2.15
NEDD4L-237ENST00000617539 DBNDD1Q9H9R9 158 aa28.51■■■□□ 2.15
NEDD4L-237ENST00000617539 TRPM7Q96QT4 1865 aa28.51■■■□□ 2.15
NEDD4L-237ENST00000617539 RIMBP2O15034 1052 aa28.5■■■□□ 2.15
NEDD4L-237ENST00000617539 CTSWP56202 376 aa28.5■■■□□ 2.15
NEDD4L-237ENST00000617539 EXOSC9Q06265 439 aaKnown RBP28.5■■■□□ 2.15
NEDD4L-237ENST00000617539 TNIP1Q15025 636 aa28.5■■■□□ 2.15
NEDD4L-237ENST00000617539 FAM9BQ8IZU0 186 aa28.5■■■□□ 2.15
NEDD4L-237ENST00000617539 PODXL2Q9NZ53 605 aa28.5■■■□□ 2.15
NEDD4L-237ENST00000617539 SHTN1A0MZ66 631 aa28.49■■■□□ 2.15
NEDD4L-237ENST00000617539 HSPA1AP0DMV8 641 aaKnown RBP28.49■■■□□ 2.15
NEDD4L-237ENST00000617539 HSPA1BP0DMV9 641 aaKnown RBP28.49■■■□□ 2.15
NEDD4L-237ENST00000617539 NEXNQ0ZGT2 675 aa28.49■■■□□ 2.15
NEDD4L-237ENST00000617539 TTLL11Q8NHH1 800 aa28.47■■■□□ 2.15
NEDD4L-237ENST00000617539 KCNQ5Q9NR82 932 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms