RNA–Protein interactions for RNA: ENST00000616114.4

PCDH15-229, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH15, Length 5,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-229ENST00000616114 CCDC43Q96MW1 224 aaKnown RBP10.3□□□□□ -0.76
PCDH15-229ENST00000616114 ABCC3O15438 1527 aa10.3□□□□□ -0.76
PCDH15-229ENST00000616114 SGSM2O43147 1006 aa10.3□□□□□ -0.76
PCDH15-229ENST00000616114 METAP2P50579 478 aaKnown RBP eCLIP10.3□□□□□ -0.76
PCDH15-229ENST00000616114 GUCY1B3Q02153 619 aa10.3□□□□□ -0.76
PCDH15-229ENST00000616114 DNM1Q05193 864 aaKnown RBP10.3□□□□□ -0.76
PCDH15-229ENST00000616114 DDX46Q7L014 1031 aaKnown RBP10.3□□□□□ -0.76
PCDH15-229ENST00000616114 CTCFLQ8NI51 663 aaPredicted RBP10.3□□□□□ -0.76
PCDH15-229ENST00000616114 OTUD7AQ8TE49 926 aaPredicted RBP10.3□□□□□ -0.76
PCDH15-229ENST00000616114 LMBR1LQ6UX01 489 aa10.3□□□□□ -0.76
PCDH15-229ENST00000616114 TMTC2Q8N394 836 aa10.3□□□□□ -0.76
PCDH15-229ENST00000616114 PAG1Q9NWQ8 432 aa10.3□□□□□ -0.76
PCDH15-229ENST00000616114 PA2G4Q9UQ80 394 aaKnown RBP10.3□□□□□ -0.76
PCDH15-229ENST00000616114 NOLC1Q14978 699 aaKnown RBP eCLIP10.29□□□□□ -0.76
PCDH15-229ENST00000616114 GBP3Q9H0R5 595 aa10.29□□□□□ -0.76
PCDH15-229ENST00000616114 CNNM2Q9H8M5 875 aa10.29□□□□□ -0.76
PCDH15-229ENST00000616114 HELLSQ9NRZ9 838 aa10.29□□□□□ -0.76
PCDH15-229ENST00000616114 USP19O94966 1318 aa10.29□□□□□ -0.76
PCDH15-229ENST00000616114 TMEM67Q5HYA8 995 aa10.29□□□□□ -0.76
PCDH15-229ENST00000616114 KRT23Q9C075 422 aa10.29□□□□□ -0.76
PCDH15-229ENST00000616114 BMP2KQ9NSY1 1161 aaPredicted RBP10.29□□□□□ -0.76
PCDH15-229ENST00000616114 ABCF2Q9UG63 623 aa10.29□□□□□ -0.76
PCDH15-229ENST00000616114 MTMR7Q9Y216 660 aa10.29□□□□□ -0.76
PCDH15-229ENST00000616114 RNF113AO15541 343 aaKnown RBP10.29□□□□□ -0.76
PCDH15-229ENST00000616114 BMP15O95972 392 aa10.29□□□□□ -0.76
PCDH15-229ENST00000616114 KCNA6P17658 529 aa10.29□□□□□ -0.76
PCDH15-229ENST00000616114 TTLL5Q6EMB2 1281 aa10.29□□□□□ -0.76
PCDH15-229ENST00000616114 MRPS27Q92552 414 aaKnown RBP10.29□□□□□ -0.76
PCDH15-229ENST00000616114 SETBP1Q9Y6X0 1596 aa10.29□□□□□ -0.76
PCDH15-229ENST00000616114 CFAP65Q6ZU64 1925 aaKnown RBP10.29□□□□□ -0.76
PCDH15-229ENST00000616114 SYT1P21579 422 aa10.29□□□□□ -0.76
PCDH15-229ENST00000616114 CCDC102BQ68D86 513 aa10.29□□□□□ -0.76
PCDH15-229ENST00000616114 CDK12Q9NYV4 1490 aaPredicted RBP10.29□□□□□ -0.76
PCDH15-229ENST00000616114 CDC42BPBQ9Y5S2 1711 aa10.29□□□□□ -0.76
PCDH15-229ENST00000616114 DHX32Q7L7V1 743 aaKnown RBP10.29□□□□□ -0.76
PCDH15-229ENST00000616114 CATIPQ7Z7H3 387 aa10.29□□□□□ -0.76
PCDH15-229ENST00000616114 HSPA4P34932 840 aa10.28□□□□□ -0.76
PCDH15-229ENST00000616114 LRRC59Q96AG4 307 aaKnown RBP10.28□□□□□ -0.76
PCDH15-229ENST00000616114 CDC5LQ99459 802 aaKnown RBP10.28□□□□□ -0.76
PCDH15-229ENST00000616114 TM6SF1Q9BZW5 370 aa10.28□□□□□ -0.76
PCDH15-229ENST00000616114 C19orf44Q9H6X5 657 aa10.28□□□□□ -0.76
PCDH15-229ENST00000616114 SNX14Q9Y5W7 946 aa10.28□□□□□ -0.76
PCDH15-229ENST00000616114 ZNF853P0CG23 659 aa10.28□□□□□ -0.76
PCDH15-229ENST00000616114 ANO6Q4KMQ2 910 aa10.28□□□□□ -0.76
PCDH15-229ENST00000616114 ARHGAP29Q52LW3 1261 aa10.28□□□□□ -0.76
PCDH15-229ENST00000616114 MFSD6Q6ZSS7 791 aa10.28□□□□□ -0.76
PCDH15-229ENST00000616114 STK11IPQ8N1F8 1099 aa10.28□□□□□ -0.76
PCDH15-229ENST00000616114 DACT1Q9NYF0 836 aa10.28□□□□□ -0.76
PCDH15-229ENST00000616114 YEATS2Q9ULM3 1422 aa10.28□□□□□ -0.76
PCDH15-229ENST00000616114 KLF18A0A0U1RQI7 1052 aa10.28□□□□□ -0.76
PCDH15-229ENST00000616114 EXOC5O00471 708 aa10.28□□□□□ -0.76
PCDH15-229ENST00000616114 KRT18P05783 430 aaKnown RBP10.28□□□□□ -0.76
PCDH15-229ENST00000616114 CWF19L2Q2TBE0 894 aaKnown RBP10.28□□□□□ -0.76
PCDH15-229ENST00000616114 LEKR1Q6ZMV7 388 aa10.28□□□□□ -0.76
PCDH15-229ENST00000616114 BICC1Q9H694 974 aaKnown RBP10.28□□□□□ -0.76
PCDH15-229ENST00000616114 MINDY4BA8MYZ0 360 aa10.28□□□□□ -0.76
PCDH15-229ENST00000616114 ATP2B3Q16720 1220 aa10.28□□□□□ -0.76
PCDH15-229ENST00000616114 TMCO3Q6UWJ1 677 aa10.28□□□□□ -0.76
PCDH15-229ENST00000616114 LLPHQ9BRT6 129 aaKnown RBP10.28□□□□□ -0.76
PCDH15-229ENST00000616114 RNF17Q9BXT8 1623 aaKnown RBP10.28□□□□□ -0.76
PCDH15-229ENST00000616114 GSPT1P15170 499 aaKnown RBP10.27□□□□□ -0.76
PCDH15-229ENST00000616114 SLC39A6Q13433 755 aa10.27□□□□□ -0.76
PCDH15-229ENST00000616114 SSH3Q8TE77 659 aa10.27□□□□□ -0.76
PCDH15-229ENST00000616114 METTL22Q9BUU2 404 aaPredicted RBP10.27□□□□□ -0.76
PCDH15-229ENST00000616114 RPS6KB1P23443 525 aa10.27□□□□□ -0.77
PCDH15-229ENST00000616114 TYRO3Q06418 890 aa10.27□□□□□ -0.77
PCDH15-229ENST00000616114 DEF6Q9H4E7 631 aa10.27□□□□□ -0.77
PCDH15-229ENST00000616114 ZNF397Q8NF99 534 aaPredicted RBP10.27□□□□□ -0.77
PCDH15-229ENST00000616114 OSBPL3Q9H4L5 887 aa10.27□□□□□ -0.77
PCDH15-229ENST00000616114 KIF5CO60282 957 aa10.27□□□□□ -0.77
PCDH15-229ENST00000616114 CASQ1P31415 396 aa10.27□□□□□ -0.77
PCDH15-229ENST00000616114 BRAPQ7Z569 592 aa10.27□□□□□ -0.77
PCDH15-229ENST00000616114 CCDC148Q8NFR7 591 aa10.27□□□□□ -0.77
PCDH15-229ENST00000616114 LMBRD1Q9NUN5 540 aa10.27□□□□□ -0.77
PCDH15-229ENST00000616114 BCL11BQ9C0K0 894 aaPredicted RBP10.27□□□□□ -0.77
PCDH15-229ENST00000616114 SNRKQ9NRH2 765 aa10.27□□□□□ -0.77
PCDH15-229ENST00000616114 PNMA6EA0A0J9YXQ4 647 aa10.26□□□□□ -0.77
PCDH15-229ENST00000616114 TMC6Q7Z403 805 aa10.26□□□□□ -0.77
PCDH15-229ENST00000616114 PLEKHG1Q9ULL1 1385 aa10.26□□□□□ -0.77
PCDH15-229ENST00000616114 ZBTB43O43298 467 aa10.26□□□□□ -0.77
PCDH15-229ENST00000616114 EIF4A1P60842 406 aaKnown RBP10.26□□□□□ -0.77
PCDH15-229ENST00000616114 TFCP2Q12800 502 aa10.26□□□□□ -0.77
PCDH15-229ENST00000616114 TAF3Q5VWG9 929 aa10.26□□□□□ -0.77
PCDH15-229ENST00000616114 NFATC2IPQ8NCF5 419 aa10.26□□□□□ -0.77
PCDH15-229ENST00000616114 CPSF1Q10570 1443 aaKnown RBP10.26□□□□□ -0.77
PCDH15-229ENST00000616114 POTEB2H3BUK9 544 aa10.26□□□□□ -0.77
PCDH15-229ENST00000616114 BRD1O95696 1058 aa10.26□□□□□ -0.77
PCDH15-229ENST00000616114 MCM3P25205 808 aa10.26□□□□□ -0.77
PCDH15-229ENST00000616114 SYKP43405 635 aa10.26□□□□□ -0.77
PCDH15-229ENST00000616114 IKQ13123 557 aaPredicted RBP10.26□□□□□ -0.77
PCDH15-229ENST00000616114 PLBD2Q8NHP8 589 aa10.26□□□□□ -0.77
PCDH15-229ENST00000616114 PHF23Q9BUL5 403 aaPredicted RBP10.26□□□□□ -0.77
PCDH15-229ENST00000616114 PTCH1Q13635 1447 aa10.26□□□□□ -0.77
PCDH15-229ENST00000616114 KIF5BP33176 963 aa10.26□□□□□ -0.77
PCDH15-229ENST00000616114 C16orf45Q96MC5 204 aaPredicted RBP10.26□□□□□ -0.77
PCDH15-229ENST00000616114 IBTKQ9P2D0 1353 aaPredicted RBP10.26□□□□□ -0.77
PCDH15-229ENST00000616114 LMTK2Q8IWU2 1503 aa10.26□□□□□ -0.77
PCDH15-229ENST00000616114 MED14O60244 1454 aa10.25□□□□□ -0.77
PCDH15-229ENST00000616114 FGFR1OPO95684 399 aaKnown RBP10.25□□□□□ -0.77
PCDH15-229ENST00000616114 EIF5P55010 431 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms