RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 KRT23Q9C075 422 aa14.39□□□□□ -0.11
TCF4-248ENST00000616053 SPDYE2BA6NHP3 402 aa14.39□□□□□ -0.11
TCF4-248ENST00000616053 OATP04181 439 aa14.39□□□□□ -0.11
TCF4-248ENST00000616053 SPDYE6P0CI01 402 aa14.39□□□□□ -0.11
TCF4-248ENST00000616053 TMEM132EQ6IEE7 984 aa14.39□□□□□ -0.11
TCF4-248ENST00000616053 BANK1Q8NDB2 785 aa14.39□□□□□ -0.11
TCF4-248ENST00000616053 CDK19Q9BWU1 502 aa14.39□□□□□ -0.11
TCF4-248ENST00000616053 GNL1P36915 607 aaPredicted RBP14.39□□□□□ -0.11
TCF4-248ENST00000616053 TMCO4Q5TGY1 634 aa14.39□□□□□ -0.11
TCF4-248ENST00000616053 LMCD1Q9NZU5 365 aa14.39□□□□□ -0.11
TCF4-248ENST00000616053 MIPOL1Q8TD10 442 aa14.39□□□□□ -0.11
TCF4-248ENST00000616053 STK32BQ9NY57 414 aa14.39□□□□□ -0.11
TCF4-248ENST00000616053 CD2APQ9Y5K6 639 aa14.39□□□□□ -0.11
TCF4-248ENST00000616053 HARSP12081 509 aaKnown RBP14.39□□□□□ -0.11
TCF4-248ENST00000616053 TSTA3Q13630 321 aaPredicted RBP14.39□□□□□ -0.11
TCF4-248ENST00000616053 SPDYE3A6NKU9 549 aa14.38□□□□□ -0.11
TCF4-248ENST00000616053 PPP2R5DQ14738 602 aa14.38□□□□□ -0.11
TCF4-248ENST00000616053 L3MBTL2Q969R5 705 aa14.38□□□□□ -0.11
TCF4-248ENST00000616053 PPP1R21Q6ZMI0 780 aa14.38□□□□□ -0.11
TCF4-248ENST00000616053 SMCR8Q8TEV9 937 aaPredicted RBP14.38□□□□□ -0.11
TCF4-248ENST00000616053 CRNKL1Q9BZJ0 848 aaKnown RBP14.38□□□□□ -0.11
TCF4-248ENST00000616053 GOLGA6BA6NDN3 693 aa14.38□□□□□ -0.11
TCF4-248ENST00000616053 VPS52Q8N1B4 723 aa14.38□□□□□ -0.11
TCF4-248ENST00000616053 FAM193BQ96PV7 902 aaPredicted RBP14.38□□□□□ -0.11
TCF4-248ENST00000616053 WDR33Q9C0J8 1336 aaKnown RBP14.38□□□□□ -0.11
TCF4-248ENST00000616053 CCDC129Q6ZRS4 1044 aa14.38□□□□□ -0.11
TCF4-248ENST00000616053 CCDC83Q8IWF9 413 aa14.37□□□□□ -0.11
TCF4-248ENST00000616053 UBXN4Q92575 508 aa14.37□□□□□ -0.11
TCF4-248ENST00000616053 EXOC1Q9NV70 894 aa14.37□□□□□ -0.11
TCF4-248ENST00000616053 RASAL2Q9UJF2 1139 aa14.37□□□□□ -0.11
TCF4-248ENST00000616053 CCDC110Q8TBZ0 833 aa14.37□□□□□ -0.11
TCF4-248ENST00000616053 SLC5A4Q9NY91 659 aa14.37□□□□□ -0.11
TCF4-248ENST00000616053 TDRD9Q8NDG6 1382 aaKnown RBP14.37□□□□□ -0.11
TCF4-248ENST00000616053 TRIM7Q9C029 511 aa14.37□□□□□ -0.11
TCF4-248ENST00000616053 KIF3CO14782 793 aa14.37□□□□□ -0.11
TCF4-248ENST00000616053 MYD88Q99836 296 aa14.37□□□□□ -0.11
TCF4-248ENST00000616053 PTPRGP23470 1445 aa14.37□□□□□ -0.11
TCF4-248ENST00000616053 NAP1L4Q99733 375 aaKnown RBP14.37□□□□□ -0.11
TCF4-248ENST00000616053 ZC3H12CQ9C0D7 883 aaKnown RBP14.37□□□□□ -0.11
TCF4-248ENST00000616053 TTLL3Q9Y4R7 772 aa14.36□□□□□ -0.11
TCF4-248ENST00000616053 FLIIQ13045 1269 aa14.36□□□□□ -0.11
TCF4-248ENST00000616053 ZGPATQ8N5A5 531 aaKnown RBP14.36□□□□□ -0.11
TCF4-248ENST00000616053 KCNH5Q8NCM2 988 aa14.36□□□□□ -0.11
TCF4-248ENST00000616053 SPAG5Q96R06 1193 aa14.36□□□□□ -0.11
TCF4-248ENST00000616053 C1orf228Q6PIY5 440 aa14.36□□□□□ -0.11
TCF4-248ENST00000616053 ALDH3A1P30838 453 aa14.36□□□□□ -0.11
TCF4-248ENST00000616053 XPAP23025 273 aaPredicted RBP14.36□□□□□ -0.11
TCF4-248ENST00000616053 ZNF692Q9BU19 519 aaPredicted RBP14.36□□□□□ -0.11
TCF4-248ENST00000616053 RNF169Q8NCN4 708 aa14.36□□□□□ -0.11
TCF4-248ENST00000616053 C8orf76Q96K31 380 aa14.36□□□□□ -0.11
TCF4-248ENST00000616053 PPP6R1Q9UPN7 881 aa14.36□□□□□ -0.11
TCF4-248ENST00000616053 ZSCAN12O43309 604 aa14.36□□□□□ -0.11
TCF4-248ENST00000616053 PRKG1Q13976 671 aa14.35□□□□□ -0.11
TCF4-248ENST00000616053 NFE2L2Q16236 605 aa14.35□□□□□ -0.11
TCF4-248ENST00000616053 SOGA1O94964 1423 aa14.35□□□□□ -0.11
TCF4-248ENST00000616053 STK10O94804 968 aaKnown RBP14.35□□□□□ -0.11
TCF4-248ENST00000616053 FMN1Q68DA7 1419 aa14.35□□□□□ -0.11
TCF4-248ENST00000616053 SFMBT1Q9UHJ3 866 aa14.35□□□□□ -0.11
TCF4-248ENST00000616053 AFAP1L2Q8N4X5 818 aa14.35□□□□□ -0.11
TCF4-248ENST00000616053 GANCQ8TET4 914 aa14.35□□□□□ -0.11
TCF4-248ENST00000616053 FAM184BQ9ULE4 1060 aa14.35□□□□□ -0.11
TCF4-248ENST00000616053 PRPHP41219 470 aa14.35□□□□□ -0.11
TCF4-248ENST00000616053 INF2Q27J81 1249 aa14.35□□□□□ -0.11
TCF4-248ENST00000616053 TMTC4Q5T4D3 741 aa14.35□□□□□ -0.11
TCF4-248ENST00000616053 DPY19L2Q6NUT2 758 aa14.35□□□□□ -0.11
TCF4-248ENST00000616053 TOP1P11387 765 aaKnown RBP14.34□□□□□ -0.11
TCF4-248ENST00000616053 SKA2Q8WVK7 121 aaPredicted RBP14.34□□□□□ -0.11
TCF4-248ENST00000616053 FAM204AQ9H8W3 233 aa14.34□□□□□ -0.11
TCF4-248ENST00000616053 AGTPBP1Q9UPW5 1226 aa14.34□□□□□ -0.11
TCF4-248ENST00000616053 PPFIBP2Q8ND30 876 aa14.34□□□□□ -0.11
TCF4-248ENST00000616053 CNNM3Q8NE01 707 aa14.34□□□□□ -0.11
TCF4-248ENST00000616053 PNMA2Q9UL42 364 aa14.34□□□□□ -0.11
TCF4-248ENST00000616053 HSF2BPO75031 334 aa14.34□□□□□ -0.11
TCF4-248ENST00000616053 STX10O60499 249 aa14.34□□□□□ -0.11
TCF4-248ENST00000616053 SFPQP23246 707 aaKnown RBP eCLIP14.34□□□□□ -0.11
TCF4-248ENST00000616053 TTC30BQ8N4P2 665 aa14.34□□□□□ -0.11
TCF4-248ENST00000616053 ZSCAN31Q96LW9 406 aaPredicted RBP14.34□□□□□ -0.11
TCF4-248ENST00000616053 PRAM1Q96QH2 718 aa14.34□□□□□ -0.11
TCF4-248ENST00000616053 IRX5P78411 483 aaPredicted RBP14.34□□□□□ -0.11
TCF4-248ENST00000616053 MPNDQ8N594 471 aa14.34□□□□□ -0.11
TCF4-248ENST00000616053 RRP1P56182 461 aaKnown RBP14.34□□□□□ -0.11
TCF4-248ENST00000616053 SARNPP82979 210 aaKnown RBP14.34□□□□□ -0.11
TCF4-248ENST00000616053 ZNF804AQ7Z570 1209 aa14.33□□□□□ -0.11
TCF4-248ENST00000616053 ERICH4A6NGS2 130 aa14.33□□□□□ -0.11
TCF4-248ENST00000616053 ZNF449Q6P9G9 518 aa14.33□□□□□ -0.11
TCF4-248ENST00000616053 ELMSAN1Q6PJG2 1045 aa14.33□□□□□ -0.11
TCF4-248ENST00000616053 ZSCAN16Q9H4T2 348 aaPredicted RBP14.33□□□□□ -0.11
TCF4-248ENST00000616053 ERCC3P19447 782 aa14.33□□□□□ -0.12
TCF4-248ENST00000616053 JADE2Q9NQC1 790 aa14.33□□□□□ -0.12
TCF4-248ENST00000616053 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.33□□□□□ -0.12
TCF4-248ENST00000616053 PPP1R12AO14974 1030 aaPredicted RBP14.33□□□□□ -0.12
TCF4-248ENST00000616053 SPDYE1Q8NFV5 336 aaPredicted RBP14.33□□□□□ -0.12
TCF4-248ENST00000616053 EXOC6Q8TAG9 804 aa14.33□□□□□ -0.12
TCF4-248ENST00000616053 PANK1Q8TE04 598 aa14.33□□□□□ -0.12
TCF4-248ENST00000616053 PPANQ9NQ55 473 aaKnown RBP14.33□□□□□ -0.12
TCF4-248ENST00000616053 ATP5J2-PTCD1G3V325 749 aa14.33□□□□□ -0.12
TCF4-248ENST00000616053 HSPA1LP34931 641 aa14.33□□□□□ -0.12
TCF4-248ENST00000616053 ARID4AP29374 1257 aaPredicted RBP14.33□□□□□ -0.12
TCF4-248ENST00000616053 PDE3AQ14432 1141 aa14.33□□□□□ -0.12
TCF4-248ENST00000616053 RBM46Q8TBY0 533 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms