RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 TRPM4Q8TD43 1214 aa5.85□□□□□ -1.47
HMGB1P24-202ENST00000615653 PHACTR1Q9C0D0 580 aa5.85□□□□□ -1.47
HMGB1P24-202ENST00000615653 HCN4Q9Y3Q4 1203 aa5.85□□□□□ -1.47
HMGB1P24-202ENST00000615653 MAP4K3Q8IVH8 894 aa5.84□□□□□ -1.47
HMGB1P24-202ENST00000615653 KRTAP9-8Q9BYQ0 159 aa5.84□□□□□ -1.47
HMGB1P24-202ENST00000615653 APBB1O00213 710 aa5.83□□□□□ -1.48
HMGB1P24-202ENST00000615653 HOXA10P31260 410 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P24-202ENST00000615653 PSMA6P60900 246 aaKnown RBP5.83□□□□□ -1.48
HMGB1P24-202ENST00000615653 GPLD1P80108 840 aa5.83□□□□□ -1.48
HMGB1P24-202ENST00000615653 SETDB1Q15047 1291 aa5.83□□□□□ -1.48
HMGB1P24-202ENST00000615653 ZNF124Q15973 351 aa5.83□□□□□ -1.48
HMGB1P24-202ENST00000615653 ZNF648Q5T619 568 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P24-202ENST00000615653 TNS4Q8IZW8 715 aa5.83□□□□□ -1.48
HMGB1P24-202ENST00000615653 KRTAP9-3Q9BYQ3 159 aa5.83□□□□□ -1.48
HMGB1P24-202ENST00000615653 SMG9Q9H0W8 520 aaKnown RBP5.83□□□□□ -1.48
HMGB1P24-202ENST00000615653 ANGEL1Q9UNK9 670 aaKnown RBP5.83□□□□□ -1.48
HMGB1P24-202ENST00000615653 COL19A1Q14993 1142 aa5.82□□□□□ -1.48
HMGB1P24-202ENST00000615653 NFXL1Q6ZNB6 911 aa5.82□□□□□ -1.48
HMGB1P24-202ENST00000615653 UTP4Q969X6 686 aaKnown RBP5.82□□□□□ -1.48
HMGB1P24-202ENST00000615653 FAM46AQ96IP4 442 aaKnown RBP5.82□□□□□ -1.48
HMGB1P24-202ENST00000615653 CEP41Q9BYV8 373 aa5.82□□□□□ -1.48
HMGB1P24-202ENST00000615653 PRNPP04156 253 aa5.81□□□□□ -1.48
HMGB1P24-202ENST00000615653 KRTAP19-4Q3LI73 84 aa5.81□□□□□ -1.48
HMGB1P24-202ENST00000615653 DHX32Q7L7V1 743 aaKnown RBP5.81□□□□□ -1.48
HMGB1P24-202ENST00000615653 CLEC10AQ8IUN9 316 aa5.81□□□□□ -1.48
HMGB1P24-202ENST00000615653 MYRFLQ96LU7 910 aa5.81□□□□□ -1.48
HMGB1P24-202ENST00000615653 FBXL18Q96ME1 805 aa5.81□□□□□ -1.48
HMGB1P24-202ENST00000615653 FAM83CQ9BQN1 747 aa5.81□□□□□ -1.48
HMGB1P24-202ENST00000615653 CCDC39Q9UFE4 941 aa5.81□□□□□ -1.48
HMGB1P24-202ENST00000615653 PRKCSHP14314 528 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P24-202ENST00000615653 HIF1AQ16665 826 aa5.8□□□□□ -1.48
HMGB1P24-202ENST00000615653 MSMPQ1L6U9 139 aa5.8□□□□□ -1.48
HMGB1P24-202ENST00000615653 IER5Q5VY09 327 aa5.8□□□□□ -1.48
HMGB1P24-202ENST00000615653 PIM2Q9P1W9 311 aa5.8□□□□□ -1.48
HMGB1P24-202ENST00000615653 NCANO14594 1321 aa5.79□□□□□ -1.48
HMGB1P24-202ENST00000615653 ZNF865P0CJ78 1059 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P24-202ENST00000615653 GTF2IP78347 998 aa5.79□□□□□ -1.48
HMGB1P24-202ENST00000615653 MLLT1Q03111 559 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P24-202ENST00000615653 IL22RA1Q8N6P7 574 aa5.79□□□□□ -1.48
HMGB1P24-202ENST00000615653 ZFATQ9P243 1243 aa5.79□□□□□ -1.48
HMGB1P24-202ENST00000615653 CHMP3Q9Y3E7 222 aa5.79□□□□□ -1.48
HMGB1P24-202ENST00000615653 WDR64B1ANS9 1081 aa5.78□□□□□ -1.48
HMGB1P24-202ENST00000615653 PRRG2O14669 202 aa5.78□□□□□ -1.48
HMGB1P24-202ENST00000615653 GRNP28799 593 aaKnown RBP5.78□□□□□ -1.48
HMGB1P24-202ENST00000615653 SNRKQ9NRH2 765 aa5.78□□□□□ -1.48
HMGB1P24-202ENST00000615653 NRLP54845 237 aa5.77□□□□□ -1.49
HMGB1P24-202ENST00000615653 IRF5Q13568 498 aa5.77□□□□□ -1.49
HMGB1P24-202ENST00000615653 EML3Q32P44 896 aa5.77□□□□□ -1.49
HMGB1P24-202ENST00000615653 VSIG10LQ86VR7 867 aa5.77□□□□□ -1.49
HMGB1P24-202ENST00000615653 FAM20CQ8IXL6 584 aa5.77□□□□□ -1.49
HMGB1P24-202ENST00000615653 TSPAN10Q9H1Z9 355 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P24-202ENST00000615653 NOD1Q9Y239 953 aa5.77□□□□□ -1.49
HMGB1P24-202ENST00000615653 WISP1O95388 367 aa5.76□□□□□ -1.49
HMGB1P24-202ENST00000615653 PAPLNO95428 1278 aa5.76□□□□□ -1.49
HMGB1P24-202ENST00000615653 PSME1Q06323 249 aa5.76□□□□□ -1.49
HMGB1P24-202ENST00000615653 TP53INP2Q8IXH6 220 aa5.76□□□□□ -1.49
HMGB1P24-202ENST00000615653 ALDH16A1Q8IZ83 802 aa5.76□□□□□ -1.49
HMGB1P24-202ENST00000615653 PLD4Q96BZ4 506 aa5.76□□□□□ -1.49
HMGB1P24-202ENST00000615653 IFT43Q96FT9 208 aa5.76□□□□□ -1.49
HMGB1P24-202ENST00000615653 C11orf16Q9NQ32 467 aa5.76□□□□□ -1.49
HMGB1P24-202ENST00000615653 DMGDHQ9UI17 866 aaKnown RBP5.76□□□□□ -1.49
HMGB1P24-202ENST00000615653 FARP2O94887 1054 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P24-202ENST00000615653 EIF2AK2P19525 551 aaKnown RBP5.75□□□□□ -1.49
HMGB1P24-202ENST00000615653 TARSP26639 723 aaKnown RBP5.75□□□□□ -1.49
HMGB1P24-202ENST00000615653 GDF6Q6KF10 455 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P24-202ENST00000615653 HFE2Q6ZVN8 426 aa5.75□□□□□ -1.49
HMGB1P24-202ENST00000615653 ACAD11Q709F0 780 aa5.75□□□□□ -1.49
HMGB1P24-202ENST00000615653 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P24-202ENST00000615653 LZTS3O60299 673 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P24-202ENST00000615653 FOSL1P15407 271 aa5.74□□□□□ -1.49
HMGB1P24-202ENST00000615653 LILRA6Q6PI73 481 aa5.74□□□□□ -1.49
HMGB1P24-202ENST00000615653 BEND4Q6ZU67 534 aa5.74□□□□□ -1.49
HMGB1P24-202ENST00000615653 CACTIN-AS1Q8N1I8 211 aa5.74□□□□□ -1.49
HMGB1P24-202ENST00000615653 GALNT11Q8NCW6 608 aa5.74□□□□□ -1.49
HMGB1P24-202ENST00000615653 MUC3BQ9H195 1237 aa5.74□□□□□ -1.49
HMGB1P24-202ENST00000615653 TBC1D2BQ9UPU7 963 aa5.74□□□□□ -1.49
HMGB1P24-202ENST00000615653 LEMD3Q9Y2U8 911 aa5.74□□□□□ -1.49
HMGB1P24-202ENST00000615653 TGFBR3LH3BV60 316 aa5.73□□□□□ -1.49
HMGB1P24-202ENST00000615653 EPB42P16452 691 aa5.73□□□□□ -1.49
HMGB1P24-202ENST00000615653 ARID4AP29374 1257 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P24-202ENST00000615653 KIAA1211Q6ZU35 1233 aa5.73□□□□□ -1.49
HMGB1P24-202ENST00000615653 KRT25Q7Z3Z0 450 aa5.73□□□□□ -1.49
HMGB1P24-202ENST00000615653 B8ZZF3 427 aa5.72□□□□□ -1.49
HMGB1P24-202ENST00000615653 TM4SF5O14894 197 aa5.72□□□□□ -1.49
HMGB1P24-202ENST00000615653 RARAP10276 462 aa5.72□□□□□ -1.49
HMGB1P24-202ENST00000615653 BMP3P12645 472 aa5.72□□□□□ -1.49
HMGB1P24-202ENST00000615653 CD68P34810 354 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P24-202ENST00000615653 VAC14Q08AM6 782 aa5.72□□□□□ -1.49
HMGB1P24-202ENST00000615653 PKN1Q16512 942 aa5.72□□□□□ -1.49
HMGB1P24-202ENST00000615653 CPSF6Q16630 551 aaKnown RBP eCLIP5.72□□□□□ -1.49
HMGB1P24-202ENST00000615653 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P24-202ENST00000615653 AGBL5Q8NDL9 886 aa5.72□□□□□ -1.49
HMGB1P24-202ENST00000615653 GIMAP7Q8NHV1 300 aa5.72□□□□□ -1.49
HMGB1P24-202ENST00000615653 KCNK4Q9NYG8 393 aa5.72□□□□□ -1.49
HMGB1P24-202ENST00000615653 CARMIL2Q6F5E8 1435 aa5.72□□□□□ -1.49
HMGB1P24-202ENST00000615653 LOC102724428A0A0B4J2F2 783 aa5.71□□□□□ -1.5
HMGB1P24-202ENST00000615653 PIK3CDO00329 1044 aa5.71□□□□□ -1.5
HMGB1P24-202ENST00000615653 SASH3O75995 380 aa5.71□□□□□ -1.5
HMGB1P24-202ENST00000615653 INPP5BP32019 993 aa5.71□□□□□ -1.5
HMGB1P24-202ENST00000615653 SIK1P57059 783 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms