RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 MEIS3Q99687 375 aa10.66□□□□□ -0.7
VPS11-206ENST00000614944 ISCA1Q9BUE6 129 aa10.66□□□□□ -0.7
VPS11-206ENST00000614944 UBR3Q6ZT12 1888 aa10.66□□□□□ -0.7
VPS11-206ENST00000614944 MAP3K15Q6ZN16 1313 aa10.65□□□□□ -0.7
VPS11-206ENST00000614944 EIF5P55010 431 aaKnown RBP10.65□□□□□ -0.7
VPS11-206ENST00000614944 INTS5Q6P9B9 1019 aaKnown RBP10.65□□□□□ -0.7
VPS11-206ENST00000614944 CCDC191Q8NCU4 936 aa10.65□□□□□ -0.7
VPS11-206ENST00000614944 GOLIM4O00461 696 aa10.65□□□□□ -0.7
VPS11-206ENST00000614944 NUCB1Q02818 461 aa10.65□□□□□ -0.7
VPS11-206ENST00000614944 EFCC1Q9HA90 598 aa10.65□□□□□ -0.7
VPS11-206ENST00000614944 CCDC87Q9NVE4 849 aa10.65□□□□□ -0.7
VPS11-206ENST00000614944 MYH3P11055 1940 aa10.65□□□□□ -0.7
VPS11-206ENST00000614944 IGKV5-2P06315 115 aa10.65□□□□□ -0.71
VPS11-206ENST00000614944 SLC27A3Q5K4L6 730 aa10.65□□□□□ -0.71
VPS11-206ENST00000614944 NBPF11Q86T75 865 aa10.65□□□□□ -0.71
VPS11-206ENST00000614944 SSH3Q8TE77 659 aa10.65□□□□□ -0.71
VPS11-206ENST00000614944 CCDC66A2RUB6 948 aa10.64□□□□□ -0.71
VPS11-206ENST00000614944 UBTFL1P0CB47 393 aaPredicted RBP10.64□□□□□ -0.71
VPS11-206ENST00000614944 KRT27Q7Z3Y8 459 aa10.64□□□□□ -0.71
VPS11-206ENST00000614944 RIC3Q7Z5B4 369 aa10.64□□□□□ -0.71
VPS11-206ENST00000614944 NECTIN2Q92692 538 aa10.64□□□□□ -0.71
VPS11-206ENST00000614944 AK7Q96M32 723 aa10.64□□□□□ -0.71
VPS11-206ENST00000614944 PLA2G12BQ9BX93 195 aa10.64□□□□□ -0.71
VPS11-206ENST00000614944 GRM8O00222 908 aa10.64□□□□□ -0.71
VPS11-206ENST00000614944 CASP7P55210 303 aa10.64□□□□□ -0.71
VPS11-206ENST00000614944 SATB1Q01826 763 aa10.64□□□□□ -0.71
VPS11-206ENST00000614944 GCKRQ14397 625 aa10.64□□□□□ -0.71
VPS11-206ENST00000614944 CDHR2Q9BYE9 1310 aa10.64□□□□□ -0.71
VPS11-206ENST00000614944 LRP5O75197 1615 aa10.64□□□□□ -0.71
VPS11-206ENST00000614944 H7C1W4 665 aa10.63□□□□□ -0.71
VPS11-206ENST00000614944 MSNP26038 577 aaKnown RBP10.63□□□□□ -0.71
VPS11-206ENST00000614944 RABL6Q3YEC7 729 aaPredicted RBP10.63□□□□□ -0.71
VPS11-206ENST00000614944 TIGD1Q96MW7 591 aa10.63□□□□□ -0.71
VPS11-206ENST00000614944 TTC36A6NLP5 189 aa10.63□□□□□ -0.71
VPS11-206ENST00000614944 ZNF500O60304 480 aaPredicted RBP10.63□□□□□ -0.71
VPS11-206ENST00000614944 PTCD1O75127 700 aaKnown RBP10.63□□□□□ -0.71
VPS11-206ENST00000614944 GIGYF2Q6Y7W6 1299 aaKnown RBP10.63□□□□□ -0.71
VPS11-206ENST00000614944 KIF6Q6ZMV9 814 aa10.63□□□□□ -0.71
VPS11-206ENST00000614944 A1BGP04217 495 aa10.63□□□□□ -0.71
VPS11-206ENST00000614944 TCIRG1Q13488 830 aa10.63□□□□□ -0.71
VPS11-206ENST00000614944 SLC4A10Q6U841 1118 aa10.63□□□□□ -0.71
VPS11-206ENST00000614944 ZSCAN30Q86W11 494 aa10.63□□□□□ -0.71
VPS11-206ENST00000614944 RIC1Q4ADV7 1423 aa10.62□□□□□ -0.71
VPS11-206ENST00000614944 RAB11FIP3O75154 756 aa10.62□□□□□ -0.71
VPS11-206ENST00000614944 MAP2K1Q02750 393 aaPredicted RBP10.62□□□□□ -0.71
VPS11-206ENST00000614944 CLEC4GQ6UXB4 293 aa10.62□□□□□ -0.71
VPS11-206ENST00000614944 RBM42Q9BTD8 480 aaKnown RBP10.62□□□□□ -0.71
VPS11-206ENST00000614944 CEP83Q9Y592 693 aa10.62□□□□□ -0.71
VPS11-206ENST00000614944 DDX60Q8IY21 1712 aaKnown RBP10.62□□□□□ -0.71
VPS11-206ENST00000614944 MYL6BP14649 208 aa10.62□□□□□ -0.71
VPS11-206ENST00000614944 ITPK1Q13572 414 aa10.62□□□□□ -0.71
VPS11-206ENST00000614944 ADRA2BP18089 450 aa10.62□□□□□ -0.71
VPS11-206ENST00000614944 ATP6V1AP38606 617 aa10.62□□□□□ -0.71
VPS11-206ENST00000614944 MYCBPQ99417 103 aaPredicted RBP10.62□□□□□ -0.71
VPS11-206ENST00000614944 GRPEL1Q9HAV7 217 aa10.62□□□□□ -0.71
VPS11-206ENST00000614944 CWC22Q9HCG8 908 aaKnown RBP10.62□□□□□ -0.71
VPS11-206ENST00000614944 CASZ1Q86V15 1759 aa10.61□□□□□ -0.71
VPS11-206ENST00000614944 PLSCR1O15162 318 aa10.61□□□□□ -0.71
VPS11-206ENST00000614944 RXRBP28702 533 aa10.61□□□□□ -0.71
VPS11-206ENST00000614944 CRKLP46109 303 aaKnown RBP10.61□□□□□ -0.71
VPS11-206ENST00000614944 HSP90AB4PQ58FF6 505 aa10.61□□□□□ -0.71
VPS11-206ENST00000614944 CC2D2BQ6DHV5 1058 aa10.61□□□□□ -0.71
VPS11-206ENST00000614944 ISY1Q9ULR0 285 aaKnown RBP10.61□□□□□ -0.71
VPS11-206ENST00000614944 KCNQ2O43526 872 aa10.61□□□□□ -0.71
VPS11-206ENST00000614944 ANXA1P04083 346 aa10.61□□□□□ -0.71
VPS11-206ENST00000614944 KIF3AQ9Y496 699 aa10.61□□□□□ -0.71
VPS11-206ENST00000614944 ACSBG1Q96GR2 724 aa10.6□□□□□ -0.71
VPS11-206ENST00000614944 CWC25Q9NXE8 425 aaPredicted RBP10.6□□□□□ -0.71
VPS11-206ENST00000614944 AOX1Q06278 1338 aa10.6□□□□□ -0.71
VPS11-206ENST00000614944 MAFGO15525 162 aa10.6□□□□□ -0.71
VPS11-206ENST00000614944 RPS6KA4O75676 772 aa10.6□□□□□ -0.71
VPS11-206ENST00000614944 PCCAP05165 728 aaPredicted RBP10.6□□□□□ -0.71
VPS11-206ENST00000614944 ZNF34Q8IZ26 560 aa10.6□□□□□ -0.71
VPS11-206ENST00000614944 PDZRN3Q9UPQ7 1066 aa10.6□□□□□ -0.71
VPS11-206ENST00000614944 ZBTB1Q9Y2K1 713 aa10.6□□□□□ -0.71
VPS11-206ENST00000614944 PARP10Q53GL7 1025 aa10.6□□□□□ -0.71
VPS11-206ENST00000614944 TTLL7Q6ZT98 887 aa10.6□□□□□ -0.71
VPS11-206ENST00000614944 CHD1LQ86WJ1 897 aa10.6□□□□□ -0.71
VPS11-206ENST00000614944 RTL9Q8NET4 1388 aa10.6□□□□□ -0.71
VPS11-206ENST00000614944 SYTL4Q96C24 671 aaPredicted RBP10.6□□□□□ -0.71
VPS11-206ENST00000614944 MYD88Q99836 296 aa10.6□□□□□ -0.71
VPS11-206ENST00000614944 TNNT3P45378 269 aaPredicted RBP10.59□□□□□ -0.71
VPS11-206ENST00000614944 PLCB2Q00722 1185 aa10.59□□□□□ -0.71
VPS11-206ENST00000614944 CT47A1Q5JQC4 288 aaPredicted RBP10.59□□□□□ -0.71
VPS11-206ENST00000614944 RNF217Q8TC41 542 aa10.59□□□□□ -0.71
VPS11-206ENST00000614944 OSBPL3Q9H4L5 887 aa10.59□□□□□ -0.71
VPS11-206ENST00000614944 RGS17Q9UGC6 210 aaPredicted RBP10.59□□□□□ -0.71
VPS11-206ENST00000614944 LRRFIP2Q9Y608 721 aaKnown RBP10.59□□□□□ -0.71
VPS11-206ENST00000614944 NRXN2Q9P2S2 1712 aa10.59□□□□□ -0.71
VPS11-206ENST00000614944 TULP2O00295 520 aa10.59□□□□□ -0.71
VPS11-206ENST00000614944 CAMTA2O94983 1202 aa10.59□□□□□ -0.71
VPS11-206ENST00000614944 NBPF7P0C2Y1 421 aaPredicted RBP10.59□□□□□ -0.71
VPS11-206ENST00000614944 LINC00116Q8NCU8 138 aa10.59□□□□□ -0.71
VPS11-206ENST00000614944 KAZALD1Q96I82 304 aa10.59□□□□□ -0.71
VPS11-206ENST00000614944 C9orf78Q9NZ63 289 aaPredicted RBP10.59□□□□□ -0.71
VPS11-206ENST00000614944 NBPF9Q3BBW0 867 aa10.59□□□□□ -0.71
VPS11-206ENST00000614944 USP42Q9H9J4 1324 aaKnown RBP10.58□□□□□ -0.72
VPS11-206ENST00000614944 ERC1Q8IUD2 1116 aa10.58□□□□□ -0.72
VPS11-206ENST00000614944 ZBTB38Q8NAP3 1195 aaPredicted RBP10.58□□□□□ -0.72
VPS11-206ENST00000614944 RAI14Q9P0K7 980 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms