RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 TRAIPQ9BWF2 469 aa9.58□□□□□ -0.88
SCAMP1-205ENST00000614488 UBE2OQ9C0C9 1292 aaKnown RBP9.58□□□□□ -0.88
SCAMP1-205ENST00000614488 ZFATQ9P243 1243 aa9.58□□□□□ -0.88
SCAMP1-205ENST00000614488 SASH3O75995 380 aa9.57□□□□□ -0.88
SCAMP1-205ENST00000614488 HOXB4P17483 251 aaPredicted RBP9.57□□□□□ -0.88
SCAMP1-205ENST00000614488 TARSP26639 723 aaKnown RBP9.57□□□□□ -0.88
SCAMP1-205ENST00000614488 PCSK7Q16549 785 aa9.57□□□□□ -0.88
SCAMP1-205ENST00000614488 KRT25Q7Z3Z0 450 aa9.57□□□□□ -0.88
SCAMP1-205ENST00000614488 PODNQ7Z5L7 613 aa9.57□□□□□ -0.88
SCAMP1-205ENST00000614488 ATCAYQ86WG3 371 aa9.57□□□□□ -0.88
SCAMP1-205ENST00000614488 UBAP1LF5GYI3 381 aa9.56□□□□□ -0.88
SCAMP1-205ENST00000614488 MZF1P28698 734 aaPredicted RBP9.56□□□□□ -0.88
SCAMP1-205ENST00000614488 DGKGP49619 791 aa9.56□□□□□ -0.88
SCAMP1-205ENST00000614488 NLRP13Q86W25 1043 aa9.56□□□□□ -0.88
SCAMP1-205ENST00000614488 EDEM1Q92611 657 aa9.56□□□□□ -0.88
SCAMP1-205ENST00000614488 NUDT16Q96DE0 195 aaKnown RBP9.56□□□□□ -0.88
SCAMP1-205ENST00000614488 DNAJB12Q9NXW2 375 aaKnown RBP9.56□□□□□ -0.88
SCAMP1-205ENST00000614488 GNEQ9Y223 722 aaKnown RBP9.56□□□□□ -0.88
SCAMP1-205ENST00000614488 PHF20L1A8MW92 1017 aa9.55□□□□□ -0.88
SCAMP1-205ENST00000614488 H3BRB1 525 aa9.55□□□□□ -0.88
SCAMP1-205ENST00000614488 PCSK2P16519 638 aa9.55□□□□□ -0.88
SCAMP1-205ENST00000614488 DHX32Q7L7V1 743 aaKnown RBP9.55□□□□□ -0.88
SCAMP1-205ENST00000614488 BEND7Q8N7W2 519 aaPredicted RBP9.55□□□□□ -0.88
SCAMP1-205ENST00000614488 TUT1Q9H6E5 874 aaKnown RBP9.55□□□□□ -0.88
SCAMP1-205ENST00000614488 RRAGCQ9HB90 399 aa9.55□□□□□ -0.88
SCAMP1-205ENST00000614488 ANO2Q9NQ90 1003 aa9.55□□□□□ -0.88
SCAMP1-205ENST00000614488 MKL2Q9ULH7 1088 aa9.55□□□□□ -0.88
SCAMP1-205ENST00000614488 SLC6A14Q9UN76 642 aa9.55□□□□□ -0.88
SCAMP1-205ENST00000614488 PIK3R2O00459 728 aa9.54□□□□□ -0.88
SCAMP1-205ENST00000614488 PDGFAP04085 211 aa9.54□□□□□ -0.88
SCAMP1-205ENST00000614488 HOXD8P13378 290 aaPredicted RBP9.54□□□□□ -0.88
SCAMP1-205ENST00000614488 SOX18P35713 384 aa9.54□□□□□ -0.88
SCAMP1-205ENST00000614488 NRLP54845 237 aa9.54□□□□□ -0.88
SCAMP1-205ENST00000614488 GPLD1P80108 840 aa9.54□□□□□ -0.88
SCAMP1-205ENST00000614488 TBC1D8BQ0IIM8 1120 aa9.54□□□□□ -0.88
SCAMP1-205ENST00000614488 PDE12Q6L8Q7 609 aaKnown RBP9.54□□□□□ -0.88
SCAMP1-205ENST00000614488 GLYCTKQ8IVS8 523 aa9.54□□□□□ -0.88
SCAMP1-205ENST00000614488 TRPM4Q8TD43 1214 aa9.54□□□□□ -0.88
SCAMP1-205ENST00000614488 TLR7Q9NYK1 1049 aaKnown RBP9.54□□□□□ -0.88
SCAMP1-205ENST00000614488 SNRPNP63162 240 aaKnown RBP9.53□□□□□ -0.88
SCAMP1-205ENST00000614488 DNM1Q05193 864 aaKnown RBP9.53□□□□□ -0.88
SCAMP1-205ENST00000614488 IGFLR1Q9H665 355 aa9.53□□□□□ -0.88
SCAMP1-205ENST00000614488 STARD13Q9Y3M8 1113 aa9.53□□□□□ -0.88
SCAMP1-205ENST00000614488 MMP20O60882 483 aa9.52□□□□□ -0.89
SCAMP1-205ENST00000614488 PSAPP07602 524 aa9.52□□□□□ -0.89
SCAMP1-205ENST00000614488 USP5P45974 858 aa9.52□□□□□ -0.89
SCAMP1-205ENST00000614488 KCNA1Q09470 495 aa9.52□□□□□ -0.89
SCAMP1-205ENST00000614488 KCNMA1Q12791 1236 aa9.52□□□□□ -0.89
SCAMP1-205ENST00000614488 PRDM6Q9NQX0 595 aa9.52□□□□□ -0.89
SCAMP1-205ENST00000614488 CNTNAP5Q8WYK1 1306 aa9.52□□□□□ -0.89
SCAMP1-205ENST00000614488 FZD6O60353 706 aa9.51□□□□□ -0.89
SCAMP1-205ENST00000614488 ALBP02768 609 aa9.51□□□□□ -0.89
SCAMP1-205ENST00000614488 PLAURQ03405 335 aa9.51□□□□□ -0.89
SCAMP1-205ENST00000614488 AAMPQ13685 434 aa9.51□□□□□ -0.89
SCAMP1-205ENST00000614488 XKR5Q6UX68 686 aa9.51□□□□□ -0.89
SCAMP1-205ENST00000614488 LINC00114Q6XXX2 140 aa9.51□□□□□ -0.89
SCAMP1-205ENST00000614488 POLIQ9UNA4 740 aa9.51□□□□□ -0.89
SCAMP1-205ENST00000614488 GNB5O14775 395 aa9.5□□□□□ -0.89
SCAMP1-205ENST00000614488 ECM1Q16610 540 aa9.5□□□□□ -0.89
SCAMP1-205ENST00000614488 C20orf204Q6ZNR8 217 aa9.5□□□□□ -0.89
SCAMP1-205ENST00000614488 TTC16Q8NEE8 873 aa9.5□□□□□ -0.89
SCAMP1-205ENST00000614488 OR13H1Q8NG92 308 aa9.5□□□□□ -0.89
SCAMP1-205ENST00000614488 NAGPAQ9UK23 515 aa9.5□□□□□ -0.89
SCAMP1-205ENST00000614488 ZBTB42B2RXF5 422 aa9.49□□□□□ -0.89
SCAMP1-205ENST00000614488 PATL2C9JE40 543 aaKnown RBP9.49□□□□□ -0.89
SCAMP1-205ENST00000614488 M0R082 166 aa9.49□□□□□ -0.89
SCAMP1-205ENST00000614488 EHHADHQ08426 723 aa9.49□□□□□ -0.89
SCAMP1-205ENST00000614488 ZNF438Q7Z4V0 828 aa9.49□□□□□ -0.89
SCAMP1-205ENST00000614488 MICALL1Q8N3F8 863 aa9.49□□□□□ -0.89
SCAMP1-205ENST00000614488 ZNF417Q8TAU3 575 aa9.49□□□□□ -0.89
SCAMP1-205ENST00000614488 ZNF587Q96SQ5 575 aaPredicted RBP9.49□□□□□ -0.89
SCAMP1-205ENST00000614488 ELP3Q9H9T3 547 aa9.49□□□□□ -0.89
SCAMP1-205ENST00000614488 ABI2Q9NYB9 513 aaPredicted RBP9.49□□□□□ -0.89
SCAMP1-205ENST00000614488 FRRS1LQ9P0K9 344 aa9.49□□□□□ -0.89
SCAMP1-205ENST00000614488 SOWAHDA6NJG2 315 aa9.48□□□□□ -0.89
SCAMP1-205ENST00000614488 ARHGAP4P98171 946 aa9.48□□□□□ -0.89
SCAMP1-205ENST00000614488 TTC39BQ5VTQ0 682 aaPredicted RBP9.48□□□□□ -0.89
SCAMP1-205ENST00000614488 FAM35AQ86V20 835 aa9.48□□□□□ -0.89
SCAMP1-205ENST00000614488 GJD3Q8N144 294 aa9.48□□□□□ -0.89
SCAMP1-205ENST00000614488 GGNBP2Q9H3C7 697 aa9.48□□□□□ -0.89
SCAMP1-205ENST00000614488 IRS1P35568 1242 aa9.47□□□□□ -0.89
SCAMP1-205ENST00000614488 GSK3AP49840 483 aa9.47□□□□□ -0.89
SCAMP1-205ENST00000614488 PSAPL1Q6NUJ1 521 aa9.47□□□□□ -0.89
SCAMP1-205ENST00000614488 CCDC87Q9NVE4 849 aa9.47□□□□□ -0.89
SCAMP1-205ENST00000614488 LILRB5O75023 590 aa9.46□□□□□ -0.9
SCAMP1-205ENST00000614488 CPB1P15086 417 aa9.46□□□□□ -0.9
SCAMP1-205ENST00000614488 MLLT1Q03111 559 aaPredicted RBP9.46□□□□□ -0.9
SCAMP1-205ENST00000614488 C8orf34Q49A92 452 aa9.46□□□□□ -0.9
SCAMP1-205ENST00000614488 ALYREFQ86V81 257 aaKnown RBP9.46□□□□□ -0.9
SCAMP1-205ENST00000614488 NOP53Q9NZM5 478 aaKnown RBP9.46□□□□□ -0.9
SCAMP1-205ENST00000614488 TMEM63CQ9P1W3 806 aa9.46□□□□□ -0.9
SCAMP1-205ENST00000614488 BRPF3Q9ULD4 1205 aa9.46□□□□□ -0.9
SCAMP1-205ENST00000614488 LOC102724428A0A0B4J2F2 783 aa9.45□□□□□ -0.9
SCAMP1-205ENST00000614488 NDUFB5O43674 189 aa9.45□□□□□ -0.9
SCAMP1-205ENST00000614488 PDIA4P13667 645 aaKnown RBP9.45□□□□□ -0.9
SCAMP1-205ENST00000614488 SIK1P57059 783 aa9.45□□□□□ -0.9
SCAMP1-205ENST00000614488 RASSF7Q02833 373 aa9.45□□□□□ -0.9
SCAMP1-205ENST00000614488 PERM1Q5SV97 790 aa9.45□□□□□ -0.9
SCAMP1-205ENST00000614488 TTC9Q92623 222 aa9.45□□□□□ -0.9
SCAMP1-205ENST00000614488 NSUN5Q96P11 429 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms