RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 TRIM35Q9UPQ4 493 aa23.26■■□□□ 1.31
SMN2-213ENST00000614240 WDR33Q9C0J8 1336 aaKnown RBP23.26■■□□□ 1.31
SMN2-213ENST00000614240 FMR1Q06787 632 aaKnown RBP eCLIP23.25■■□□□ 1.31
SMN2-213ENST00000614240 PLBD2Q8NHP8 589 aa23.25■■□□□ 1.31
SMN2-213ENST00000614240 BCL2L13Q9BXK5 485 aa23.25■■□□□ 1.31
SMN2-213ENST00000614240 GMPSP49915 693 aaPredicted RBP23.24■■□□□ 1.31
SMN2-213ENST00000614240 MAP2K1Q02750 393 aaPredicted RBP23.24■■□□□ 1.31
SMN2-213ENST00000614240 GRM1Q13255 1194 aa23.24■■□□□ 1.31
SMN2-213ENST00000614240 TNIP1Q15025 636 aa23.24■■□□□ 1.31
SMN2-213ENST00000614240 CIAPIN1Q6FI81 312 aa23.24■■□□□ 1.31
SMN2-213ENST00000614240 ANKRD13DQ6ZTN6 518 aa23.24■■□□□ 1.31
SMN2-213ENST00000614240 DBF4Q9UBU7 674 aaPredicted RBP23.24■■□□□ 1.31
SMN2-213ENST00000614240 LTBP1Q14766 1721 aa23.23■■□□□ 1.31
SMN2-213ENST00000614240 TRAF5O00463 557 aa23.23■■□□□ 1.31
SMN2-213ENST00000614240 RAD17O75943 681 aa23.23■■□□□ 1.31
SMN2-213ENST00000614240 LBX1P52954 281 aa23.23■■□□□ 1.31
SMN2-213ENST00000614240 KIAA2012Q0VF49 1180 aa23.23■■□□□ 1.31
SMN2-213ENST00000614240 TMC4Q7Z404 712 aa23.23■■□□□ 1.31
SMN2-213ENST00000614240 ADAMTS8Q9UP79 889 aa23.23■■□□□ 1.31
SMN2-213ENST00000614240 HOXB7P09629 217 aa23.22■■□□□ 1.31
SMN2-213ENST00000614240 ECE1P42892 770 aa23.22■■□□□ 1.31
SMN2-213ENST00000614240 ATP5J2-PTCD1G3V325 749 aa23.21■■□□□ 1.31
SMN2-213ENST00000614240 FAM89AQ96GI7 184 aa23.21■■□□□ 1.31
SMN2-213ENST00000614240 HYPKQ9NX55 129 aa23.21■■□□□ 1.31
SMN2-213ENST00000614240 DUSP27Q5VZP5 1158 aa23.2■■□□□ 1.3
SMN2-213ENST00000614240 CAPNS2Q96L46 248 aa23.2■■□□□ 1.3
SMN2-213ENST00000614240 CFAP44Q96MT7 982 aa23.2■■□□□ 1.3
SMN2-213ENST00000614240 BEGAINQ9BUH8 593 aa23.2■■□□□ 1.3
SMN2-213ENST00000614240 ANKRD36CQ5JPF3 1778 aa23.19■■□□□ 1.3
SMN2-213ENST00000614240 RTL5Q5HYW3 569 aaPredicted RBP23.19■■□□□ 1.3
SMN2-213ENST00000614240 CST9Q5W186 159 aa23.19■■□□□ 1.3
SMN2-213ENST00000614240 ISCA1Q9BUE6 129 aa23.19■■□□□ 1.3
SMN2-213ENST00000614240 PCNTO95613 3336 aa23.18■■□□□ 1.3
SMN2-213ENST00000614240 CDHR2Q9BYE9 1310 aa23.18■■□□□ 1.3
SMN2-213ENST00000614240 CYP4F22Q6NT55 531 aa23.18■■□□□ 1.3
SMN2-213ENST00000614240 NSFL1CQ9UNZ2 370 aaKnown RBP23.18■■□□□ 1.3
SMN2-213ENST00000614240 CELF2O95319 508 aaKnown RBP23.17■■□□□ 1.3
SMN2-213ENST00000614240 WASHC4Q2M389 1173 aa23.17■■□□□ 1.3
SMN2-213ENST00000614240 GPR101Q96P66 508 aaPredicted RBP23.17■■□□□ 1.3
SMN2-213ENST00000614240 MBIPQ9NS73 344 aa23.17■■□□□ 1.3
SMN2-213ENST00000614240 TLL2Q9Y6L7 1015 aa23.17■■□□□ 1.3
SMN2-213ENST00000614240 C6orf229H3BNL8 230 aa23.16■■□□□ 1.3
SMN2-213ENST00000614240 H7C1D1 291 aa23.16■■□□□ 1.3
SMN2-213ENST00000614240 HSPA8P11142 646 aaKnown RBP23.16■■□□□ 1.3
SMN2-213ENST00000614240 SF3B3Q15393 1217 aaKnown RBP23.16■■□□□ 1.3
SMN2-213ENST00000614240 RIC3Q7Z5B4 369 aa23.16■■□□□ 1.3
SMN2-213ENST00000614240 GLIS2Q9BZE0 524 aaPredicted RBP23.16■■□□□ 1.3
SMN2-213ENST00000614240 CNOT7Q9UIV1 285 aaKnown RBP23.16■■□□□ 1.3
SMN2-213ENST00000614240 LAMB2P55268 1798 aa23.16■■□□□ 1.3
SMN2-213ENST00000614240 IRS4O14654 1257 aaPredicted RBP23.15■■□□□ 1.3
SMN2-213ENST00000614240 GOLGA2Q08379 1002 aa23.15■■□□□ 1.3
SMN2-213ENST00000614240 ZC3H15Q8WU90 426 aaKnown RBP23.15■■□□□ 1.3
SMN2-213ENST00000614240 CELF1Q92879 486 aaKnown RBP23.15■■□□□ 1.3
SMN2-213ENST00000614240 ZNF408Q9H9D4 720 aa23.15■■□□□ 1.3
SMN2-213ENST00000614240 YDJCA8MPS7 323 aa23.14■■□□□ 1.29
SMN2-213ENST00000614240 RIMBP2O15034 1052 aa23.14■■□□□ 1.29
SMN2-213ENST00000614240 CALD1Q05682 793 aaKnown RBP23.13■■□□□ 1.29
SMN2-213ENST00000614240 CDC37L1Q7L3B6 337 aa23.13■■□□□ 1.29
SMN2-213ENST00000614240 MICALL2Q8IY33 904 aa23.13■■□□□ 1.29
SMN2-213ENST00000614240 EYA3Q99504 573 aa23.13■■□□□ 1.29
SMN2-213ENST00000614240 DBNDD1Q9H9R9 158 aa23.13■■□□□ 1.29
SMN2-213ENST00000614240 PGAP2Q9UHJ9 254 aa23.13■■□□□ 1.29
SMN2-213ENST00000614240 ELL2O00472 640 aaPredicted RBP23.12■■□□□ 1.29
SMN2-213ENST00000614240 HSP90B1P14625 803 aaKnown RBP23.12■■□□□ 1.29
SMN2-213ENST00000614240 HIRAP54198 1017 aaPredicted RBP23.12■■□□□ 1.29
SMN2-213ENST00000614240 GPSM2P81274 684 aa23.12■■□□□ 1.29
SMN2-213ENST00000614240 TRIM28Q13263 835 aaKnown RBP23.12■■□□□ 1.29
SMN2-213ENST00000614240 TRPM4Q8TD43 1214 aa23.12■■□□□ 1.29
SMN2-213ENST00000614240 ZBTB12Q9Y330 459 aaPredicted RBP23.12■■□□□ 1.29
SMN2-213ENST00000614240 SHTN1A0MZ66 631 aa23.11■■□□□ 1.29
SMN2-213ENST00000614240 APAF1O14727 1248 aa23.11■■□□□ 1.29
SMN2-213ENST00000614240 RPS8P62241 208 aaKnown RBP23.11■■□□□ 1.29
SMN2-213ENST00000614240 GNAI1P63096 354 aa23.11■■□□□ 1.29
SMN2-213ENST00000614240 SAPCD2Q86UD0 394 aa23.11■■□□□ 1.29
SMN2-213ENST00000614240 G3V3G9 751 aa23.1■■□□□ 1.29
SMN2-213ENST00000614240 PSMD14O00487 310 aa23.1■■□□□ 1.29
SMN2-213ENST00000614240 AOC2O75106 756 aa23.1■■□□□ 1.29
SMN2-213ENST00000614240 MAP2K2P36507 400 aa23.1■■□□□ 1.29
SMN2-213ENST00000614240 DCAF8Q5TAQ9 597 aa23.1■■□□□ 1.29
SMN2-213ENST00000614240 ZBTB38Q8NAP3 1195 aaPredicted RBP23.1■■□□□ 1.29
SMN2-213ENST00000614240 PRKRIP1Q9H875 184 aaPredicted RBP23.1■■□□□ 1.29
SMN2-213ENST00000614240 IFT57Q9NWB7 429 aa23.1■■□□□ 1.29
SMN2-213ENST00000614240 POLLQ9UGP5 575 aa23.1■■□□□ 1.29
SMN2-213ENST00000614240 TAF1P21675 1872 aa23.09■■□□□ 1.29
SMN2-213ENST00000614240 ZNF853P0CG23 659 aa23.09■■□□□ 1.29
SMN2-213ENST00000614240 DOK7Q18PE1 504 aa23.09■■□□□ 1.29
SMN2-213ENST00000614240 DPF2Q92785 391 aa23.09■■□□□ 1.29
SMN2-213ENST00000614240 MYD88Q99836 296 aa23.09■■□□□ 1.29
SMN2-213ENST00000614240 PHAXQ9H814 394 aaKnown RBP23.09■■□□□ 1.29
SMN2-213ENST00000614240 TRPM7Q96QT4 1865 aa23.09■■□□□ 1.29
SMN2-213ENST00000614240 ECE2O60344 883 aa23.08■■□□□ 1.29
SMN2-213ENST00000614240 SAMD7Q7Z3H4 446 aa23.08■■□□□ 1.29
SMN2-213ENST00000614240 USP48Q86UV5 1035 aa23.08■■□□□ 1.29
SMN2-213ENST00000614240 ZC3H12CQ9C0D7 883 aaKnown RBP23.08■■□□□ 1.29
SMN2-213ENST00000614240 DUOX1Q9NRD9 1551 aa23.08■■□□□ 1.29
SMN2-213ENST00000614240 TBC1D10BQ4KMP7 808 aaPredicted RBP23.07■■□□□ 1.28
SMN2-213ENST00000614240 RBM26Q5T8P6 1007 aaKnown RBP23.07■■□□□ 1.28
SMN2-213ENST00000614240 TBC1D16Q8TBP0 767 aa23.07■■□□□ 1.28
SMN2-213ENST00000614240 ANKIB1Q9P2G1 1089 aa23.07■■□□□ 1.28
SMN2-213ENST00000614240 DDX60Q8IY21 1712 aaKnown RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms