RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, human

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-223	ENST00000613988	CENPB	P07199	599 aa	Predicted RBP	28.06	■■■□□ 2.08
CBWD1-223	ENST00000613988	GOLGA2	Q08379	1002 aa		28.06	■■■□□ 2.08
CBWD1-223	ENST00000613988	MPND	Q8N594	471 aa		28.06	■■■□□ 2.08
CBWD1-223	ENST00000613988	PHAX	Q9H814	394 aa	Known RBP	28.06	■■■□□ 2.08
CBWD1-223	ENST00000613988	LMOD1	P29536	600 aa	Predicted RBP	28.05	■■■□□ 2.08
CBWD1-223	ENST00000613988	TRIM28	Q13263	835 aa	Known RBP	28.05	■■■□□ 2.08
CBWD1-223	ENST00000613988	C8orf58	Q8NAV2	365 aa		28.05	■■■□□ 2.08
CBWD1-223	ENST00000613988	RTFDC1	Q9BY42	306 aa	Predicted RBP	28.05	■■■□□ 2.08
CBWD1-223	ENST00000613988	PASK	Q96RG2	1323 aa		28.04	■■■□□ 2.08
CBWD1-223	ENST00000613988	RTL5	Q5HYW3	569 aa	Predicted RBP	28.04	■■■□□ 2.08
CBWD1-223	ENST00000613988	ITGBL1	O95965	494 aa	Predicted RBP	28.03	■■■□□ 2.08
CBWD1-223	ENST00000613988	TMC4	Q7Z404	712 aa		28.03	■■■□□ 2.08
CBWD1-223	ENST00000613988	CHMP4A	Q9BY43	222 aa		28.03	■■■□□ 2.08
CBWD1-223	ENST00000613988	TAF1	P21675	1872 aa		28.03	■■■□□ 2.08
CBWD1-223	ENST00000613988	DDX60	Q8IY21	1712 aa	Known RBP	28.02	■■■□□ 2.08
CBWD1-223	ENST00000613988	SF3B3	Q15393	1217 aa	Known RBP	28.01	■■■□□ 2.07
CBWD1-223	ENST00000613988	FAM9B	Q8IZU0	186 aa		28.01	■■■□□ 2.07
CBWD1-223	ENST00000613988	ZNRF3	Q9ULT6	936 aa		28.01	■■■□□ 2.07
CBWD1-223	ENST00000613988	IRS4	O14654	1257 aa	Predicted RBP	28	■■■□□ 2.07
CBWD1-223	ENST00000613988	SCNN1D	P51172	638 aa		28	■■■□□ 2.07
CBWD1-223	ENST00000613988	CCDC30	Q5VVM6	783 aa		28	■■■□□ 2.07
CBWD1-223	ENST00000613988	MAP1S	Q66K74	1059 aa	Predicted RBP	28	■■■□□ 2.07
CBWD1-223	ENST00000613988	CNTROB	Q8N137	903 aa		28	■■■□□ 2.07
CBWD1-223	ENST00000613988	MKRN1	Q9UHC7	482 aa	Known RBP	28	■■■□□ 2.07
CBWD1-223	ENST00000613988	ADAMTSL1	Q8N6G6	1762 aa		28	■■■□□ 2.07
CBWD1-223	ENST00000613988	EPS15	P42566	896 aa		27.99	■■■□□ 2.07
CBWD1-223	ENST00000613988	KIAA2012	Q0VF49	1180 aa		27.99	■■■□□ 2.07
CBWD1-223	ENST00000613988	MYD88	Q99836	296 aa		27.99	■■■□□ 2.07
CBWD1-223	ENST00000613988	TMEM88B	A6NKF7	163 aa		27.98	■■■□□ 2.07
CBWD1-223	ENST00000613988	CXCL9	Q07325	125 aa		27.98	■■■□□ 2.07
CBWD1-223	ENST00000613988	CCDC27	Q2M243	656 aa		27.98	■■■□□ 2.07
CBWD1-223	ENST00000613988	TSPYL6	Q8N831	410 aa		27.98	■■■□□ 2.07
CBWD1-223	ENST00000613988	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	27.98	■■■□□ 2.07
CBWD1-223	ENST00000613988	CELF1	Q92879	486 aa	Known RBP	27.98	■■■□□ 2.07
CBWD1-223	ENST00000613988	TSR2	Q969E8	191 aa	Known RBP	27.98	■■■□□ 2.07
CBWD1-223	ENST00000613988	LTBP1	Q14766	1721 aa		27.97	■■■□□ 2.07
CBWD1-223	ENST00000613988	DDX58	O95786	925 aa	Known RBP	27.97	■■■□□ 2.07
CBWD1-223	ENST00000613988	WWC1	Q8IX03	1113 aa		27.96	■■■□□ 2.07
CBWD1-223	ENST00000613988	HSP90B1	P14625	803 aa	Known RBP	27.95	■■■□□ 2.06
CBWD1-223	ENST00000613988	USP50	Q70EL3	339 aa	Predicted RBP	27.95	■■■□□ 2.06
CBWD1-223	ENST00000613988	CCDC191	Q8NCU4	936 aa		27.95	■■■□□ 2.06
CBWD1-223	ENST00000613988	NSFL1C	Q9UNZ2	370 aa	Known RBP	27.95	■■■□□ 2.06
CBWD1-223	ENST00000613988	HSPA1A	P0DMV8	641 aa	Known RBP	27.94	■■■□□ 2.06
CBWD1-223	ENST00000613988	HSPA1B	P0DMV9	641 aa	Known RBP	27.94	■■■□□ 2.06
CBWD1-223	ENST00000613988	CIAPIN1	Q6FI81	312 aa		27.94	■■■□□ 2.06
CBWD1-223	ENST00000613988	GPRC5D	Q9NZD1	345 aa		27.94	■■■□□ 2.06
CBWD1-223	ENST00000613988	TNIP1	Q15025	636 aa		27.93	■■■□□ 2.06
CBWD1-223	ENST00000613988	METTL22	Q9BUU2	404 aa	Predicted RBP	27.93	■■■□□ 2.06
CBWD1-223	ENST00000613988	CWC25	Q9NXE8	425 aa	Predicted RBP	27.93	■■■□□ 2.06
CBWD1-223	ENST00000613988	RAD17	O75943	681 aa		27.92	■■■□□ 2.06
CBWD1-223	ENST00000613988	RPS8	P62241	208 aa	Known RBP	27.92	■■■□□ 2.06
CBWD1-223	ENST00000613988	STK31	Q9BXU1	1019 aa		27.92	■■■□□ 2.06
CBWD1-223	ENST00000613988	ADARB2	Q9NS39	739 aa	Known RBP	27.92	■■■□□ 2.06
CBWD1-223	ENST00000613988	CNTNAP1	P78357	1384 aa		27.92	■■■□□ 2.06
CBWD1-223	ENST00000613988	LRRC37A	A6NMS7	1700 aa		27.92	■■■□□ 2.06
CBWD1-223	ENST00000613988	PCCA	P05165	728 aa	Predicted RBP	27.91	■■■□□ 2.06
CBWD1-223	ENST00000613988	GMPS	P49915	693 aa	Predicted RBP	27.91	■■■□□ 2.06
CBWD1-223	ENST00000613988	WASHC4	Q2M389	1173 aa		27.91	■■■□□ 2.06
CBWD1-223	ENST00000613988	COL13A1	Q5TAT6	717 aa	Predicted RBP	27.91	■■■□□ 2.06
CBWD1-223	ENST00000613988	MAP3K2	Q9Y2U5	619 aa		27.91	■■■□□ 2.06
CBWD1-223	ENST00000613988	C6orf229	H3BNL8	230 aa		27.9	■■■□□ 2.06
CBWD1-223	ENST00000613988	GPSM2	P81274	684 aa		27.9	■■■□□ 2.06
CBWD1-223	ENST00000613988	JARID2	Q92833	1246 aa	Predicted RBP	27.9	■■■□□ 2.06
CBWD1-223	ENST00000613988	BCL2L13	Q9BXK5	485 aa		27.9	■■■□□ 2.06
CBWD1-223	ENST00000613988	DUOX1	Q9NRD9	1551 aa		27.89	■■■□□ 2.06
CBWD1-223	ENST00000613988	TWISTNB	Q3B726	338 aa	Predicted RBP	27.89	■■■□□ 2.06
CBWD1-223	ENST00000613988	KSR2	Q6VAB6	950 aa		27.89	■■■□□ 2.06
CBWD1-223	ENST00000613988	IL16	Q14005	1332 aa		27.88	■■■□□ 2.05
CBWD1-223	ENST00000613988	PDE8A	O60658	829 aa		27.88	■■■□□ 2.05
CBWD1-223	ENST00000613988	NCBP3	Q53F19	620 aa	Known RBP	27.88	■■■□□ 2.05
CBWD1-223	ENST00000613988	SEC31B	Q9NQW1	1179 aa		27.88	■■■□□ 2.05
CBWD1-223	ENST00000613988	POLL	Q9UGP5	575 aa		27.88	■■■□□ 2.05
CBWD1-223	ENST00000613988	PI4KAP2	A4QPH2	592 aa		27.87	■■■□□ 2.05
CBWD1-223	ENST00000613988	YDJC	A8MPS7	323 aa		27.87	■■■□□ 2.05
CBWD1-223	ENST00000613988	RIMBP2	O15034	1052 aa		27.87	■■■□□ 2.05
CBWD1-223	ENST00000613988	HNRNPU	Q00839	825 aa	Known RBP eCLIP	27.87	■■■□□ 2.05
CBWD1-223	ENST00000613988	CCDC152	Q4G0S7	254 aa		27.87	■■■□□ 2.05
CBWD1-223	ENST00000613988	PI4KAP1	Q8N8J0	262 aa		27.87	■■■□□ 2.05
CBWD1-223	ENST00000613988	COL4A1	P02462	1669 aa		27.87	■■■□□ 2.05
CBWD1-223	ENST00000613988	VEGFB	P49765	207 aa		27.86	■■■□□ 2.05
CBWD1-223	ENST00000613988	EYA3	Q99504	573 aa		27.86	■■■□□ 2.05
CBWD1-223	ENST00000613988	CDHR2	Q9BYE9	1310 aa		27.86	■■■□□ 2.05
CBWD1-223	ENST00000613988	ABT1	Q9ULW3	272 aa	Known RBP	27.86	■■■□□ 2.05
CBWD1-223	ENST00000613988	SALL2	Q9Y467	1007 aa	Predicted RBP	27.86	■■■□□ 2.05
CBWD1-223	ENST00000613988	SLC4A2	P04920	1241 aa		27.85	■■■□□ 2.05
CBWD1-223	ENST00000613988	NEXN	Q0ZGT2	675 aa		27.85	■■■□□ 2.05
CBWD1-223	ENST00000613988	DEFB115	Q30KQ5	88 aa		27.85	■■■□□ 2.05
CBWD1-223	ENST00000613988	TBC1D16	Q8TBP0	767 aa		27.85	■■■□□ 2.05
CBWD1-223	ENST00000613988	CCDC85A	Q96PX6	553 aa	Predicted RBP	27.85	■■■□□ 2.05
CBWD1-223	ENST00000613988	DBNDD1	Q9H9R9	158 aa		27.85	■■■□□ 2.05
CBWD1-223	ENST00000613988	CNOT7	Q9UIV1	285 aa	Known RBP	27.84	■■■□□ 2.05
CBWD1-223	ENST00000613988	RASSF10	A6NK89	507 aa		27.83	■■■□□ 2.05
CBWD1-223	ENST00000613988	IGKV5-2	P06315	115 aa		27.83	■■■□□ 2.05
CBWD1-223	ENST00000613988	FMR1	Q06787	632 aa	Known RBP eCLIP	27.83	■■■□□ 2.05
CBWD1-223	ENST00000613988	G2E3	Q7L622	706 aa		27.83	■■■□□ 2.05
CBWD1-223	ENST00000613988	ANKIB1	Q9P2G1	1089 aa		27.83	■■■□□ 2.05
CBWD1-223	ENST00000613988	TRAF5	O00463	557 aa		27.82	■■■□□ 2.04
CBWD1-223	ENST00000613988	DOK7	Q18PE1	504 aa		27.82	■■■□□ 2.04
CBWD1-223	ENST00000613988	GPR101	Q96P66	508 aa	Predicted RBP	27.82	■■■□□ 2.04
CBWD1-223	ENST00000613988	ZC3H12C	Q9C0D7	883 aa	Known RBP	27.82	■■■□□ 2.04

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