RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 TTLL7Q6ZT98 887 aa14.38□□□□□ -0.11
SLIRP-212ENST00000613856 LINS1Q8NG48 757 aa14.38□□□□□ -0.11
SLIRP-212ENST00000613856 METTL22Q9BUU2 404 aaPredicted RBP14.38□□□□□ -0.11
SLIRP-212ENST00000613856 TAOK3Q9H2K8 898 aa14.38□□□□□ -0.11
SLIRP-212ENST00000613856 PRDM10Q9NQV6 1147 aa14.38□□□□□ -0.11
SLIRP-212ENST00000613856 ZNF330Q9Y3S2 320 aaPredicted RBP14.38□□□□□ -0.11
SLIRP-212ENST00000613856 MAP3K15Q6ZN16 1313 aa14.38□□□□□ -0.11
SLIRP-212ENST00000613856 ZNF541Q9H0D2 1346 aa14.38□□□□□ -0.11
SLIRP-212ENST00000613856 ITGBL1O95965 494 aaPredicted RBP14.37□□□□□ -0.11
SLIRP-212ENST00000613856 NEXNQ0ZGT2 675 aa14.37□□□□□ -0.11
SLIRP-212ENST00000613856 PRPF40BQ6NWY9 871 aaKnown RBP14.37□□□□□ -0.11
SLIRP-212ENST00000613856 TAF1DQ9H5J8 278 aaPredicted RBP14.37□□□□□ -0.11
SLIRP-212ENST00000613856 LTBP3Q9NS15 1303 aa14.37□□□□□ -0.11
SLIRP-212ENST00000613856 RGL2O15211 777 aa14.36□□□□□ -0.11
SLIRP-212ENST00000613856 CCDC136Q96JN2 1154 aa14.36□□□□□ -0.11
SLIRP-212ENST00000613856 BRIP1Q9BX63 1249 aa14.36□□□□□ -0.11
SLIRP-212ENST00000613856 WBP1LQ9NX94 342 aa14.36□□□□□ -0.11
SLIRP-212ENST00000613856 LTBP1Q14766 1721 aa14.35□□□□□ -0.11
SLIRP-212ENST00000613856 A0A087WZG4 1122 aa14.35□□□□□ -0.11
SLIRP-212ENST00000613856 ERVV-1B6SEH8 477 aa14.35□□□□□ -0.11
SLIRP-212ENST00000613856 IGKV5-2P06315 115 aa14.35□□□□□ -0.11
SLIRP-212ENST00000613856 GNAI3P08754 354 aa14.35□□□□□ -0.11
SLIRP-212ENST00000613856 HSPA8P11142 646 aaKnown RBP14.35□□□□□ -0.11
SLIRP-212ENST00000613856 CTCFP49711 727 aaPredicted RBP14.35□□□□□ -0.11
SLIRP-212ENST00000613856 FMR1Q06787 632 aaKnown RBP eCLIP14.35□□□□□ -0.11
SLIRP-212ENST00000613856 NPM2Q86SE8 214 aaKnown RBP14.35□□□□□ -0.11
SLIRP-212ENST00000613856 LDHDQ86WU2 507 aa14.35□□□□□ -0.11
SLIRP-212ENST00000613856 MEIS3Q99687 375 aa14.35□□□□□ -0.11
SLIRP-212ENST00000613856 COL4A5P29400 1685 aa14.34□□□□□ -0.11
SLIRP-212ENST00000613856 NEURL1BA8MQ27 555 aa14.34□□□□□ -0.11
SLIRP-212ENST00000613856 SRGNP10124 158 aa14.34□□□□□ -0.11
SLIRP-212ENST00000613856 PDE6BP35913 854 aa14.34□□□□□ -0.11
SLIRP-212ENST00000613856 EAPPQ56P03 285 aaPredicted RBP14.34□□□□□ -0.11
SLIRP-212ENST00000613856 HSP90AB3PQ58FF7 597 aa14.34□□□□□ -0.11
SLIRP-212ENST00000613856 GIGYF2Q6Y7W6 1299 aaKnown RBP14.34□□□□□ -0.11
SLIRP-212ENST00000613856 SLC51AQ86UW1 340 aa14.34□□□□□ -0.11
SLIRP-212ENST00000613856 DZIP3Q86Y13 1208 aaKnown RBP14.34□□□□□ -0.11
SLIRP-212ENST00000613856 ABHD8Q96I13 439 aa14.34□□□□□ -0.11
SLIRP-212ENST00000613856 MYD88Q99836 296 aa14.34□□□□□ -0.11
SLIRP-212ENST00000613856 ZBTB3Q9H5J0 574 aa14.34□□□□□ -0.11
SLIRP-212ENST00000613856 UTYO14607 1347 aa14.34□□□□□ -0.11
SLIRP-212ENST00000613856 TMEM88BA6NKF7 163 aa14.33□□□□□ -0.12
SLIRP-212ENST00000613856 TRIM28Q13263 835 aaKnown RBP14.33□□□□□ -0.12
SLIRP-212ENST00000613856 MAP1SQ66K74 1059 aaPredicted RBP14.33□□□□□ -0.12
SLIRP-212ENST00000613856 B4GALNT3Q6L9W6 998 aa14.33□□□□□ -0.12
SLIRP-212ENST00000613856 C7orf43Q8WVR3 580 aa14.33□□□□□ -0.12
SLIRP-212ENST00000613856 AIDAQ96BJ3 306 aa14.33□□□□□ -0.12
SLIRP-212ENST00000613856 L3MBTL3Q96JM7 780 aaPredicted RBP14.33□□□□□ -0.12
SLIRP-212ENST00000613856 USP44Q9H0E7 712 aa14.33□□□□□ -0.12
SLIRP-212ENST00000613856 ZNF277Q9NRM2 450 aaPredicted RBP14.33□□□□□ -0.12
SLIRP-212ENST00000613856 PCDHB15Q9Y5E8 787 aa14.33□□□□□ -0.12
SLIRP-212ENST00000613856 CAMTA2O94983 1202 aa14.32□□□□□ -0.12
SLIRP-212ENST00000613856 TCIRG1Q13488 830 aa14.32□□□□□ -0.12
SLIRP-212ENST00000613856 GCKRQ14397 625 aa14.32□□□□□ -0.12
SLIRP-212ENST00000613856 CWF19L2Q2TBE0 894 aaKnown RBP14.32□□□□□ -0.12
SLIRP-212ENST00000613856 CNBD1Q8NA66 436 aa14.32□□□□□ -0.12
SLIRP-212ENST00000613856 ISCA1Q9BUE6 129 aa14.32□□□□□ -0.12
SLIRP-212ENST00000613856 THSD7BQ9C0I4 1608 aa14.32□□□□□ -0.12
SLIRP-212ENST00000613856 LAMB2P55268 1798 aa14.32□□□□□ -0.12
SLIRP-212ENST00000613856 GRM8O00222 908 aa14.31□□□□□ -0.12
SLIRP-212ENST00000613856 GNAI2P04899 355 aa14.31□□□□□ -0.12
SLIRP-212ENST00000613856 UBTFL1P0CB47 393 aaPredicted RBP14.31□□□□□ -0.12
SLIRP-212ENST00000613856 HDAC1Q13547 482 aaPredicted RBP14.31□□□□□ -0.12
SLIRP-212ENST00000613856 STYK1Q6J9G0 422 aa14.31□□□□□ -0.12
SLIRP-212ENST00000613856 CCDC191Q8NCU4 936 aa14.31□□□□□ -0.12
SLIRP-212ENST00000613856 HDAC5Q9UQL6 1122 aa14.31□□□□□ -0.12
SLIRP-212ENST00000613856 CENPQQ7L2Z9 268 aaPredicted RBP14.3□□□□□ -0.12
SLIRP-212ENST00000613856 CNKSR1Q969H4 720 aa14.3□□□□□ -0.12
SLIRP-212ENST00000613856 CWC25Q9NXE8 425 aaPredicted RBP14.3□□□□□ -0.12
SLIRP-212ENST00000613856 CLEC11AQ9Y240 323 aa14.3□□□□□ -0.12
SLIRP-212ENST00000613856 MYH3P11055 1940 aa14.3□□□□□ -0.12
SLIRP-212ENST00000613856 IQCA1LA6NCM1 817 aa14.29□□□□□ -0.12
SLIRP-212ENST00000613856 RASSF10A6NK89 507 aa14.29□□□□□ -0.12
SLIRP-212ENST00000613856 EPHX2P34913 555 aa14.29□□□□□ -0.12
SLIRP-212ENST00000613856 HLFQ16534 295 aa14.29□□□□□ -0.12
SLIRP-212ENST00000613856 CEP85Q6P2H3 762 aa14.29□□□□□ -0.12
SLIRP-212ENST00000613856 CLEC4GQ6UXB4 293 aa14.29□□□□□ -0.12
SLIRP-212ENST00000613856 RPAP2Q8IXW5 612 aaPredicted RBP14.29□□□□□ -0.12
SLIRP-212ENST00000613856 ANKRD44Q8N8A2 993 aa14.29□□□□□ -0.12
SLIRP-212ENST00000613856 RWDD1Q9H446 243 aaPredicted RBP14.29□□□□□ -0.12
SLIRP-212ENST00000613856 C1orf115Q9H7X2 142 aa14.29□□□□□ -0.12
SLIRP-212ENST00000613856 C9orf78Q9NZ63 289 aaPredicted RBP14.29□□□□□ -0.12
SLIRP-212ENST00000613856 TSKSQ9UJT2 592 aa14.29□□□□□ -0.12
SLIRP-212ENST00000613856 ZNF652Q9Y2D9 606 aa14.29□□□□□ -0.12
SLIRP-212ENST00000613856 ATP5J2-PTCD1G3V325 749 aa14.28□□□□□ -0.12
SLIRP-212ENST00000613856 NBPF7P0C2Y1 421 aaPredicted RBP14.28□□□□□ -0.12
SLIRP-212ENST00000613856 DEFB115Q30KQ5 88 aa14.28□□□□□ -0.12
SLIRP-212ENST00000613856 CNTROBQ8N137 903 aa14.28□□□□□ -0.12
SLIRP-212ENST00000613856 MASTLQ96GX5 879 aa14.28□□□□□ -0.12
SLIRP-212ENST00000613856 SETDB2Q96T68 719 aa14.28□□□□□ -0.12
SLIRP-212ENST00000613856 WDR33Q9C0J8 1336 aaKnown RBP14.28□□□□□ -0.12
SLIRP-212ENST00000613856 HACL1Q9UJ83 578 aa14.28□□□□□ -0.12
SLIRP-212ENST00000613856 LRRFIP2Q9Y608 721 aaKnown RBP14.28□□□□□ -0.12
SLIRP-212ENST00000613856 TRPM7Q96QT4 1865 aa14.27□□□□□ -0.12
SLIRP-212ENST00000613856 SNED1Q8TER0 1413 aa14.27□□□□□ -0.12
SLIRP-212ENST00000613856 NPHP1O15259 732 aa14.27□□□□□ -0.13
SLIRP-212ENST00000613856 CASP7P55210 303 aa14.27□□□□□ -0.13
SLIRP-212ENST00000613856 CCDC93Q567U6 631 aa14.27□□□□□ -0.13
SLIRP-212ENST00000613856 ZNF34Q8IZ26 560 aa14.27□□□□□ -0.13
SLIRP-212ENST00000613856 CASP8AP2Q9UKL3 1982 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms