RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 COL24A1Q17RW2 1714 aa17.05■□□□□ 0.32
TMEM254-213ENST00000613758 SERPINB2P05120 415 aa17.05■□□□□ 0.32
TMEM254-213ENST00000613758 PTPN12Q05209 780 aaKnown RBP17.05■□□□□ 0.32
TMEM254-213ENST00000613758 CCDC57Q2TAC2 916 aa17.05■□□□□ 0.32
TMEM254-213ENST00000613758 LNPKQ9C0E8 428 aa17.05■□□□□ 0.32
TMEM254-213ENST00000613758 COPRSQ9NQ92 184 aa17.05■□□□□ 0.32
TMEM254-213ENST00000613758 DDR1Q08345 913 aa17.04■□□□□ 0.32
TMEM254-213ENST00000613758 G3BP1Q13283 466 aaKnown RBP eCLIP17.04■□□□□ 0.32
TMEM254-213ENST00000613758 FAM161AQ3B820 660 aa17.04■□□□□ 0.32
TMEM254-213ENST00000613758 POLRMTO00411 1230 aaKnown RBP17.04■□□□□ 0.32
TMEM254-213ENST00000613758 RGS3P49796 1198 aa17.04■□□□□ 0.32
TMEM254-213ENST00000613758 IFIT5Q13325 482 aaKnown RBP17.04■□□□□ 0.32
TMEM254-213ENST00000613758 OS9Q13438 667 aaPredicted RBP17.04■□□□□ 0.32
TMEM254-213ENST00000613758 CCDC24Q8N4L8 307 aa17.04■□□□□ 0.32
TMEM254-213ENST00000613758 CNBD1Q8NA66 436 aa17.04■□□□□ 0.32
TMEM254-213ENST00000613758 LRRCC1Q9C099 1032 aa17.04■□□□□ 0.32
TMEM254-213ENST00000613758 SIL1Q9H173 461 aa17.04■□□□□ 0.32
TMEM254-213ENST00000613758 GREM2Q9H772 168 aa17.04■□□□□ 0.32
TMEM254-213ENST00000613758 ABCC12Q96J65 1359 aa17.03■□□□□ 0.32
TMEM254-213ENST00000613758 SMARCA5O60264 1052 aaPredicted RBP17.03■□□□□ 0.32
TMEM254-213ENST00000613758 MSL1Q68DK7 614 aa17.03■□□□□ 0.32
TMEM254-213ENST00000613758 ITGA6P23229 1130 aa17.02■□□□□ 0.32
TMEM254-213ENST00000613758 PRR5LQ6MZQ0 368 aa17.02■□□□□ 0.32
TMEM254-213ENST00000613758 QSER1Q2KHR3 1735 aa17.02■□□□□ 0.32
TMEM254-213ENST00000613758 ANKRD18BA2A2Z9 1011 aa17.02■□□□□ 0.31
TMEM254-213ENST00000613758 CCDC152Q4G0S7 254 aa17.02■□□□□ 0.31
TMEM254-213ENST00000613758 RHPN1Q8TCX5 695 aa17.02■□□□□ 0.31
TMEM254-213ENST00000613758 ZNF594Q96JF6 807 aaPredicted RBP17.02■□□□□ 0.31
TMEM254-213ENST00000613758 NLRP3Q96P20 1036 aa17.02■□□□□ 0.31
TMEM254-213ENST00000613758 BCL11AQ9H165 835 aa17.02■□□□□ 0.31
TMEM254-213ENST00000613758 DDX60Q8IY21 1712 aaKnown RBP17.02■□□□□ 0.31
TMEM254-213ENST00000613758 PDE4AP27815 886 aa17.01■□□□□ 0.31
TMEM254-213ENST00000613758 SF3B3Q15393 1217 aaKnown RBP17.01■□□□□ 0.31
TMEM254-213ENST00000613758 C3orf67Q6ZVT6 689 aa17.01■□□□□ 0.31
TMEM254-213ENST00000613758 ERC1Q8IUD2 1116 aa17.01■□□□□ 0.31
TMEM254-213ENST00000613758 KIF1BPQ96EK5 621 aa17.01■□□□□ 0.31
TMEM254-213ENST00000613758 MMP10P09238 476 aa17.01■□□□□ 0.31
TMEM254-213ENST00000613758 TAF7LQ5H9L4 462 aa17.01■□□□□ 0.31
TMEM254-213ENST00000613758 PDGFDQ9GZP0 370 aaPredicted RBP17.01■□□□□ 0.31
TMEM254-213ENST00000613758 ST5P78524 1137 aa17■□□□□ 0.31
TMEM254-213ENST00000613758 PARP3Q9Y6F1 533 aa17■□□□□ 0.31
TMEM254-213ENST00000613758 MYH3P11055 1940 aa17■□□□□ 0.31
TMEM254-213ENST00000613758 ILDR2Q71H61 639 aa16.99■□□□□ 0.31
TMEM254-213ENST00000613758 C16orf71Q8IYS4 520 aaPredicted RBP16.99■□□□□ 0.31
TMEM254-213ENST00000613758 BACH2Q9BYV9 841 aa16.99■□□□□ 0.31
TMEM254-213ENST00000613758 IL1RAPL2Q9NP60 686 aa16.99■□□□□ 0.31
TMEM254-213ENST00000613758 LAMB2P55268 1798 aa16.99■□□□□ 0.31
TMEM254-213ENST00000613758 EYA2O00167 538 aa16.99■□□□□ 0.31
TMEM254-213ENST00000613758 SASH1O94885 1247 aa16.99■□□□□ 0.31
TMEM254-213ENST00000613758 RTL9Q8NET4 1388 aa16.99■□□□□ 0.31
TMEM254-213ENST00000613758 PUS3Q9BZE2 481 aaKnown RBP16.98■□□□□ 0.31
TMEM254-213ENST00000613758 SEC31BQ9NQW1 1179 aa16.98■□□□□ 0.31
TMEM254-213ENST00000613758 CIAO1O76071 339 aa16.98■□□□□ 0.31
TMEM254-213ENST00000613758 LRRC24Q50LG9 513 aa16.98■□□□□ 0.31
TMEM254-213ENST00000613758 ATG9AQ7Z3C6 839 aa16.98■□□□□ 0.31
TMEM254-213ENST00000613758 SLC16A10Q8TF71 515 aa16.98■□□□□ 0.31
TMEM254-213ENST00000613758 FBXO3Q9UK99 471 aa16.98■□□□□ 0.31
TMEM254-213ENST00000613758 IL15P40933 162 aaPredicted RBP16.97■□□□□ 0.31
TMEM254-213ENST00000613758 LDHAL6AQ6ZMR3 332 aa16.96■□□□□ 0.31
TMEM254-213ENST00000613758 TFCP2Q12800 502 aa16.96■□□□□ 0.31
TMEM254-213ENST00000613758 CLASRPQ8N2M8 674 aaKnown RBP16.96■□□□□ 0.31
TMEM254-213ENST00000613758 RIC1Q4ADV7 1423 aa16.96■□□□□ 0.31
TMEM254-213ENST00000613758 OTUD7AQ8TE49 926 aaPredicted RBP16.95■□□□□ 0.3
TMEM254-213ENST00000613758 CDC5LQ99459 802 aaKnown RBP16.95■□□□□ 0.3
TMEM254-213ENST00000613758 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.95■□□□□ 0.3
TMEM254-213ENST00000613758 R3HDM1Q15032 1099 aaKnown RBP16.95■□□□□ 0.3
TMEM254-213ENST00000613758 PLEKHM2Q8IWE5 1019 aa16.95■□□□□ 0.3
TMEM254-213ENST00000613758 CNNM1Q9NRU3 951 aa16.95■□□□□ 0.3
TMEM254-213ENST00000613758 RIPOR2Q9Y4F9 1068 aa16.95■□□□□ 0.3
TMEM254-213ENST00000613758 IGHMBP2P38935 993 aaKnown RBP16.94■□□□□ 0.3
TMEM254-213ENST00000613758 C8orf34Q49A92 452 aa16.94■□□□□ 0.3
TMEM254-213ENST00000613758 MPHOSPH8Q99549 860 aa16.94■□□□□ 0.3
TMEM254-213ENST00000613758 BRIP1Q9BX63 1249 aa16.94■□□□□ 0.3
TMEM254-213ENST00000613758 DDX46Q7L014 1031 aaKnown RBP16.94■□□□□ 0.3
TMEM254-213ENST00000613758 ANKRD18AQ8IVF6 992 aa16.94■□□□□ 0.3
TMEM254-213ENST00000613758 CEP126Q9P2H0 1117 aa16.93■□□□□ 0.3
TMEM254-213ENST00000613758 TNRC6CQ9HCJ0 1690 aaKnown RBP16.93■□□□□ 0.3
TMEM254-213ENST00000613758 NRXN2Q9P2S2 1712 aa16.92■□□□□ 0.3
TMEM254-213ENST00000613758 KLRG2A4D1S0 409 aaPredicted RBP16.92■□□□□ 0.3
TMEM254-213ENST00000613758 CRY2Q49AN0 593 aa16.92■□□□□ 0.3
TMEM254-213ENST00000613758 AACSQ86V21 672 aa16.92■□□□□ 0.3
TMEM254-213ENST00000613758 RPGRQ92834 1020 aaKnown RBP16.92■□□□□ 0.3
TMEM254-213ENST00000613758 CELF1Q92879 486 aaKnown RBP16.92■□□□□ 0.3
TMEM254-213ENST00000613758 EAF2Q96CJ1 260 aaPredicted RBP16.92■□□□□ 0.3
TMEM254-213ENST00000613758 IFIT2P09913 472 aaKnown RBP16.91■□□□□ 0.3
TMEM254-213ENST00000613758 RPS8P62241 208 aaKnown RBP16.91■□□□□ 0.3
TMEM254-213ENST00000613758 TNNI3KQ59H18 835 aa16.91■□□□□ 0.3
TMEM254-213ENST00000613758 METTL24Q5JXM2 366 aa16.91■□□□□ 0.3
TMEM254-213ENST00000613758 GPR108Q9NPR9 543 aa16.91■□□□□ 0.3
TMEM254-213ENST00000613758 FPGT-TNNI3KV9GXZ4 949 aa16.91■□□□□ 0.3
TMEM254-213ENST00000613758 ZBTB7AO95365 584 aa16.91■□□□□ 0.3
TMEM254-213ENST00000613758 MX1P20591 662 aa16.91■□□□□ 0.3
TMEM254-213ENST00000613758 PDE1AP54750 535 aa16.91■□□□□ 0.3
TMEM254-213ENST00000613758 CCDC8Q9H0W5 538 aaPredicted RBP16.91■□□□□ 0.3
TMEM254-213ENST00000613758 SALL3Q9BXA9 1300 aa16.91■□□□□ 0.3
TMEM254-213ENST00000613758 PDE6BP35913 854 aa16.9■□□□□ 0.3
TMEM254-213ENST00000613758 RBM17Q96I25 401 aaKnown RBP16.9■□□□□ 0.3
TMEM254-213ENST00000613758 BSDC1Q9NW68 430 aaPredicted RBP16.9■□□□□ 0.3
TMEM254-213ENST00000613758 MROH5Q6ZUA9 1318 aa16.9■□□□□ 0.3
TMEM254-213ENST00000613758 CASZ1Q86V15 1759 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms