RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 ZNF500O60304 480 aaPredicted RBP8.1□□□□□ -1.11
CDKAL1-204ENST00000613575 CALRP27797 417 aaKnown RBP8.1□□□□□ -1.11
CDKAL1-204ENST00000613575 SKIV2LQ15477 1246 aaKnown RBP8.1□□□□□ -1.11
CDKAL1-204ENST00000613575 NBPF6Q5VWK0 638 aa8.1□□□□□ -1.11
CDKAL1-204ENST00000613575 INTS3Q68E01 1043 aaKnown RBP8.1□□□□□ -1.11
CDKAL1-204ENST00000613575 NBPF5PQ86XG9 351 aaPredicted RBP8.1□□□□□ -1.11
CDKAL1-204ENST00000613575 NBPF4Q96M43 638 aa8.1□□□□□ -1.11
CDKAL1-204ENST00000613575 PCMTD1Q96MG8 357 aaPredicted RBP8.1□□□□□ -1.11
CDKAL1-204ENST00000613575 CWC22Q9HCG8 908 aaKnown RBP8.1□□□□□ -1.11
CDKAL1-204ENST00000613575 HTATSF1O43719 755 aaKnown RBP8.09□□□□□ -1.11
CDKAL1-204ENST00000613575 MSNP26038 577 aaKnown RBP8.09□□□□□ -1.11
CDKAL1-204ENST00000613575 CLK2P49760 499 aaKnown RBP8.09□□□□□ -1.11
CDKAL1-204ENST00000613575 COPS2P61201 443 aa8.09□□□□□ -1.11
CDKAL1-204ENST00000613575 GUCA2AQ02747 115 aa8.09□□□□□ -1.11
CDKAL1-204ENST00000613575 SULT6B1Q6IMI4 303 aa8.09□□□□□ -1.11
CDKAL1-204ENST00000613575 ZNF771Q7L3S4 317 aaPredicted RBP8.09□□□□□ -1.11
CDKAL1-204ENST00000613575 CHD1LQ86WJ1 897 aa8.09□□□□□ -1.11
CDKAL1-204ENST00000613575 OTUD6BQ8N6M0 293 aa8.09□□□□□ -1.11
CDKAL1-204ENST00000613575 HLA-CQ95604 372 aa8.09□□□□□ -1.11
CDKAL1-204ENST00000613575 ANTXR1Q9H6X2 564 aa8.09□□□□□ -1.11
CDKAL1-204ENST00000613575 CALCOCO1Q9P1Z2 691 aa8.09□□□□□ -1.11
CDKAL1-204ENST00000613575 UBR1Q8IWV7 1749 aa8.09□□□□□ -1.11
CDKAL1-204ENST00000613575 MON2Q7Z3U7 1717 aa8.08□□□□□ -1.12
CDKAL1-204ENST00000613575 CCDC172P0C7W6 258 aa8.08□□□□□ -1.12
CDKAL1-204ENST00000613575 FDX1P10109 184 aa8.08□□□□□ -1.12
CDKAL1-204ENST00000613575 CEBPAP49715 358 aaPredicted RBP8.08□□□□□ -1.12
CDKAL1-204ENST00000613575 HSP90AB2PQ58FF8 381 aa8.08□□□□□ -1.12
CDKAL1-204ENST00000613575 RSBN1LQ6PCB5 846 aaPredicted RBP8.08□□□□□ -1.12
CDKAL1-204ENST00000613575 ZSCAN30Q86W11 494 aa8.08□□□□□ -1.12
CDKAL1-204ENST00000613575 SIRT2Q8IXJ6 389 aa8.08□□□□□ -1.12
CDKAL1-204ENST00000613575 SLC26A8Q96RN1 970 aa8.08□□□□□ -1.12
CDKAL1-204ENST00000613575 TRIM34Q9BYJ4 488 aa8.08□□□□□ -1.12
CDKAL1-204ENST00000613575 C3P01024 1663 aa8.08□□□□□ -1.12
CDKAL1-204ENST00000613575 ERBB4Q15303 1308 aa8.08□□□□□ -1.12
CDKAL1-204ENST00000613575 MAP2P11137 1827 aaKnown RBP8.08□□□□□ -1.12
CDKAL1-204ENST00000613575 A0A0G2JS52 829 aa8.08□□□□□ -1.12
CDKAL1-204ENST00000613575 FAM83GA6ND36 823 aa8.08□□□□□ -1.12
CDKAL1-204ENST00000613575 TULP2O00295 520 aa8.08□□□□□ -1.12
CDKAL1-204ENST00000613575 RBM25P49756 843 aaKnown RBP8.08□□□□□ -1.12
CDKAL1-204ENST00000613575 MFAP1P55081 439 aaKnown RBP8.08□□□□□ -1.12
CDKAL1-204ENST00000613575 GABPB1Q06547 395 aaPredicted RBP8.08□□□□□ -1.12
CDKAL1-204ENST00000613575 ZKSCAN8Q15776 578 aaPredicted RBP8.08□□□□□ -1.12
CDKAL1-204ENST00000613575 BMP2KLQ5H9B9 411 aa8.08□□□□□ -1.12
CDKAL1-204ENST00000613575 BLOC1S3Q6QNY0 202 aa8.08□□□□□ -1.12
CDKAL1-204ENST00000613575 NCAPGQ9BPX3 1015 aa8.08□□□□□ -1.12
CDKAL1-204ENST00000613575 DCTPP1Q9H773 170 aa8.08□□□□□ -1.12
CDKAL1-204ENST00000613575 GOPCQ9HD26 462 aa8.08□□□□□ -1.12
CDKAL1-204ENST00000613575 KDRP35968 1356 aa8.07□□□□□ -1.12
CDKAL1-204ENST00000613575 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.07□□□□□ -1.12
CDKAL1-204ENST00000613575 LOC102724159A0A0B4J2E5 919 aa8.07□□□□□ -1.12
CDKAL1-204ENST00000613575 SPTLC1O15269 473 aa8.07□□□□□ -1.12
CDKAL1-204ENST00000613575 NR1I2O75469 434 aa8.07□□□□□ -1.12
CDKAL1-204ENST00000613575 PWP2Q15269 919 aaKnown RBP8.07□□□□□ -1.12
CDKAL1-204ENST00000613575 MORN1Q5T089 497 aa8.07□□□□□ -1.12
CDKAL1-204ENST00000613575 RPAP2Q8IXW5 612 aaPredicted RBP8.07□□□□□ -1.12
CDKAL1-204ENST00000613575 PROCA1Q8NCQ7 364 aaPredicted RBP8.07□□□□□ -1.12
CDKAL1-204ENST00000613575 C22orf23Q9BZE7 217 aa8.07□□□□□ -1.12
CDKAL1-204ENST00000613575 LIMD1Q9UGP4 676 aa8.07□□□□□ -1.12
CDKAL1-204ENST00000613575 ARHGEF10O15013 1369 aa8.07□□□□□ -1.12
CDKAL1-204ENST00000613575 AKAP12Q02952 1782 aa8.06□□□□□ -1.12
CDKAL1-204ENST00000613575 PTPRCP08575 1304 aa8.06□□□□□ -1.12
CDKAL1-204ENST00000613575 MAP3K19Q56UN5 1328 aa8.06□□□□□ -1.12
CDKAL1-204ENST00000613575 CRB1P82279 1406 aa8.06□□□□□ -1.12
CDKAL1-204ENST00000613575 ANKARQ7Z5J8 1434 aa8.06□□□□□ -1.12
CDKAL1-204ENST00000613575 ELL2O00472 640 aaPredicted RBP8.06□□□□□ -1.12
CDKAL1-204ENST00000613575 KIF1CO43896 1103 aaKnown RBP8.06□□□□□ -1.12
CDKAL1-204ENST00000613575 TNNT3P45378 269 aaPredicted RBP8.06□□□□□ -1.12
CDKAL1-204ENST00000613575 HSPA2P54652 639 aa8.06□□□□□ -1.12
CDKAL1-204ENST00000613575 DCTN1Q14203 1278 aa8.06□□□□□ -1.12
CDKAL1-204ENST00000613575 SASS6Q6UVJ0 657 aa8.06□□□□□ -1.12
CDKAL1-204ENST00000613575 BRMS1Q9HCU9 246 aa8.06□□□□□ -1.12
CDKAL1-204ENST00000613575 BABAM1Q9NWV8 329 aa8.06□□□□□ -1.12
CDKAL1-204ENST00000613575 SLC27A5Q9Y2P5 690 aa8.06□□□□□ -1.12
CDKAL1-204ENST00000613575 R3HCC1Q9Y3T6 440 aaKnown RBP8.06□□□□□ -1.12
CDKAL1-204ENST00000613575 SBNO1A3KN83 1393 aa8.06□□□□□ -1.12
CDKAL1-204ENST00000613575 SCUBE3Q8IX30 993 aa8.05□□□□□ -1.12
CDKAL1-204ENST00000613575 MNS1Q8NEH6 495 aa8.05□□□□□ -1.12
CDKAL1-204ENST00000613575 SNX21Q969T3 373 aa8.05□□□□□ -1.12
CDKAL1-204ENST00000613575 CHMP4CQ96CF2 233 aa8.05□□□□□ -1.12
CDKAL1-204ENST00000613575 MTRQ99707 1265 aa8.05□□□□□ -1.12
CDKAL1-204ENST00000613575 SOS1Q07889 1333 aaPredicted RBP8.05□□□□□ -1.12
CDKAL1-204ENST00000613575 IGSF1Q8N6C5 1336 aa8.05□□□□□ -1.12
CDKAL1-204ENST00000613575 FLT4P35916 1363 aa8.05□□□□□ -1.12
CDKAL1-204ENST00000613575 NUTM2BA6NNL0 878 aaPredicted RBP8.05□□□□□ -1.12
CDKAL1-204ENST00000613575 NUTM2EB1AL46 878 aaPredicted RBP8.05□□□□□ -1.12
CDKAL1-204ENST00000613575 C6orf229H3BNL8 230 aa8.05□□□□□ -1.12
CDKAL1-204ENST00000613575 GTF2A1P52655 376 aaPredicted RBP8.05□□□□□ -1.12
CDKAL1-204ENST00000613575 CCDC173Q0VFZ6 552 aa8.05□□□□□ -1.12
CDKAL1-204ENST00000613575 MTHFSDQ2M296 383 aaKnown RBP8.05□□□□□ -1.12
CDKAL1-204ENST00000613575 HS1BP3Q53T59 392 aa8.05□□□□□ -1.12
CDKAL1-204ENST00000613575 ANKRD45Q5TZF3 282 aa8.05□□□□□ -1.12
CDKAL1-204ENST00000613575 NUTM2AQ8IVF1 878 aaPredicted RBP8.05□□□□□ -1.12
CDKAL1-204ENST00000613575 ANKRD44Q8N8A2 993 aa8.05□□□□□ -1.12
CDKAL1-204ENST00000613575 GAS2L2Q8NHY3 880 aa8.05□□□□□ -1.12
CDKAL1-204ENST00000613575 LNPKQ9C0E8 428 aa8.05□□□□□ -1.12
CDKAL1-204ENST00000613575 GRPEL1Q9HAV7 217 aa8.05□□□□□ -1.12
CDKAL1-204ENST00000613575 NRKQ7Z2Y5 1582 aa8.04□□□□□ -1.12
CDKAL1-204ENST00000613575 LTBP4Q8N2S1 1624 aa8.04□□□□□ -1.12
CDKAL1-204ENST00000613575 ARID4AP29374 1257 aaPredicted RBP8.04□□□□□ -1.12
CDKAL1-204ENST00000613575 GJA5P36382 358 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms