RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 NBPF5PQ86XG9 351 aaPredicted RBP25.06■■□□□ 1.6
CPNE9-205ENST00000613455 RHPN1Q8TCX5 695 aa25.06■■□□□ 1.6
CPNE9-205ENST00000613455 CCDC85AQ96PX6 553 aaPredicted RBP25.06■■□□□ 1.6
CPNE9-205ENST00000613455 KIF1BPQ96EK5 621 aa25.06■■□□□ 1.6
CPNE9-205ENST00000613455 SIL1Q9H173 461 aa25.06■■□□□ 1.6
CPNE9-205ENST00000613455 GREM2Q9H772 168 aa25.05■■□□□ 1.6
CPNE9-205ENST00000613455 ZBTB47Q9UFB7 747 aaPredicted RBP25.05■■□□□ 1.6
CPNE9-205ENST00000613455 TM4SF1P30408 202 aa25.04■■□□□ 1.6
CPNE9-205ENST00000613455 OS9Q13438 667 aaPredicted RBP25.04■■□□□ 1.6
CPNE9-205ENST00000613455 C16orf71Q8IYS4 520 aaPredicted RBP25.04■■□□□ 1.6
CPNE9-205ENST00000613455 STK32BQ9NY57 414 aa25.04■■□□□ 1.6
CPNE9-205ENST00000613455 HSP90B1P14625 803 aaKnown RBP25.03■■□□□ 1.6
CPNE9-205ENST00000613455 G3BP1Q13283 466 aaKnown RBP eCLIP25.03■■□□□ 1.6
CPNE9-205ENST00000613455 CCDC57Q2TAC2 916 aa25.03■■□□□ 1.6
CPNE9-205ENST00000613455 SLC10A5Q5PT55 438 aa25.03■■□□□ 1.6
CPNE9-205ENST00000613455 ERC1Q8IUD2 1116 aa25.03■■□□□ 1.6
CPNE9-205ENST00000613455 OTUD7AQ8TE49 926 aaPredicted RBP25.03■■□□□ 1.6
CPNE9-205ENST00000613455 LRP5O75197 1615 aa25.03■■□□□ 1.6
CPNE9-205ENST00000613455 SASH1O94885 1247 aa25.03■■□□□ 1.6
CPNE9-205ENST00000613455 ZNF594Q96JF6 807 aaPredicted RBP25.03■■□□□ 1.6
CPNE9-205ENST00000613455 IL1RAPL2Q9NP60 686 aa25.03■■□□□ 1.6
CPNE9-205ENST00000613455 TNRC6CQ9HCJ0 1690 aaKnown RBP25.02■■□□□ 1.6
CPNE9-205ENST00000613455 ITGA6P23229 1130 aa25.02■■□□□ 1.6
CPNE9-205ENST00000613455 IFIT5Q13325 482 aaKnown RBP25.02■■□□□ 1.6
CPNE9-205ENST00000613455 TPTE2Q6XPS3 522 aa25.02■■□□□ 1.6
CPNE9-205ENST00000613455 BCL11AQ9H165 835 aa25.02■■□□□ 1.6
CPNE9-205ENST00000613455 MSH5O43196 834 aa25.01■■□□□ 1.59
CPNE9-205ENST00000613455 C3orf67Q6ZVT6 689 aa25.01■■□□□ 1.59
CPNE9-205ENST00000613455 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.01■■□□□ 1.59
CPNE9-205ENST00000613455 RTL9Q8NET4 1388 aa25.01■■□□□ 1.59
CPNE9-205ENST00000613455 SALL3Q9BXA9 1300 aa25.01■■□□□ 1.59
CPNE9-205ENST00000613455 GTF2E1P29083 439 aaPredicted RBP25■■□□□ 1.59
CPNE9-205ENST00000613455 DDR1Q08345 913 aa25■■□□□ 1.59
CPNE9-205ENST00000613455 PLEKHM2Q8IWE5 1019 aa25■■□□□ 1.59
CPNE9-205ENST00000613455 ATG9AQ7Z3C6 839 aa25■■□□□ 1.59
CPNE9-205ENST00000613455 ANKRD18BA2A2Z9 1011 aa24.99■■□□□ 1.59
CPNE9-205ENST00000613455 POLRMTO00411 1230 aaKnown RBP24.99■■□□□ 1.59
CPNE9-205ENST00000613455 CCDC152Q4G0S7 254 aa24.99■■□□□ 1.59
CPNE9-205ENST00000613455 CNBD1Q8NA66 436 aa24.99■■□□□ 1.59
CPNE9-205ENST00000613455 NRXN2Q9P2S2 1712 aa24.99■■□□□ 1.59
CPNE9-205ENST00000613455 CIAO1O76071 339 aa24.98■■□□□ 1.59
CPNE9-205ENST00000613455 LRRC24Q50LG9 513 aa24.98■■□□□ 1.59
CPNE9-205ENST00000613455 NLGN1Q8N2Q7 840 aa24.98■■□□□ 1.59
CPNE9-205ENST00000613455 CCDC24Q8N4L8 307 aa24.98■■□□□ 1.59
CPNE9-205ENST00000613455 COL4A1P02462 1669 aa24.98■■□□□ 1.59
CPNE9-205ENST00000613455 EYA2O00167 538 aa24.98■■□□□ 1.59
CPNE9-205ENST00000613455 PUS3Q9BZE2 481 aaKnown RBP24.98■■□□□ 1.59
CPNE9-205ENST00000613455 RIC1Q4ADV7 1423 aa24.97■■□□□ 1.59
CPNE9-205ENST00000613455 SERPINB2P05120 415 aa24.97■■□□□ 1.59
CPNE9-205ENST00000613455 SF3B3Q15393 1217 aaKnown RBP24.97■■□□□ 1.59
CPNE9-205ENST00000613455 PRR5LQ6MZQ0 368 aa24.97■■□□□ 1.59
CPNE9-205ENST00000613455 FBXO3Q9UK99 471 aa24.97■■□□□ 1.59
CPNE9-205ENST00000613455 SPEF2Q9C093 1822 aa24.96■■□□□ 1.59
CPNE9-205ENST00000613455 IL15P40933 162 aaPredicted RBP24.95■■□□□ 1.59
CPNE9-205ENST00000613455 TAF7LQ5H9L4 462 aa24.95■■□□□ 1.59
CPNE9-205ENST00000613455 SEC31BQ9NQW1 1179 aa24.95■■□□□ 1.59
CPNE9-205ENST00000613455 TFCP2Q12800 502 aa24.95■■□□□ 1.58
CPNE9-205ENST00000613455 CLASRPQ8N2M8 674 aaKnown RBP24.95■■□□□ 1.58
CPNE9-205ENST00000613455 UPF1Q92900 1129 aaKnown RBP eCLIP24.95■■□□□ 1.58
CPNE9-205ENST00000613455 TAF1P21675 1872 aa24.94■■□□□ 1.58
CPNE9-205ENST00000613455 NPHP1O15259 732 aa24.94■■□□□ 1.58
CPNE9-205ENST00000613455 PDE1AP54750 535 aa24.94■■□□□ 1.58
CPNE9-205ENST00000613455 OSBPL3Q9H4L5 887 aa24.94■■□□□ 1.58
CPNE9-205ENST00000613455 MX1P20591 662 aa24.93■■□□□ 1.58
CPNE9-205ENST00000613455 MSL1Q68DK7 614 aa24.93■■□□□ 1.58
CPNE9-205ENST00000613455 NLRP3Q96P20 1036 aa24.93■■□□□ 1.58
CPNE9-205ENST00000613455 EAF2Q96CJ1 260 aaPredicted RBP24.92■■□□□ 1.58
CPNE9-205ENST00000613455 RIPOR2Q9Y4F9 1068 aa24.92■■□□□ 1.58
CPNE9-205ENST00000613455 STAP2Q9UGK3 403 aa24.92■■□□□ 1.58
CPNE9-205ENST00000613455 ANKRD31Q8N7Z5 1873 aa24.91■■□□□ 1.58
CPNE9-205ENST00000613455 MMP10P09238 476 aa24.91■■□□□ 1.58
CPNE9-205ENST00000613455 ST5P78524 1137 aa24.91■■□□□ 1.58
CPNE9-205ENST00000613455 TSHZ3Q63HK5 1081 aa24.91■■□□□ 1.58
CPNE9-205ENST00000613455 LDHAL6AQ6ZMR3 332 aa24.91■■□□□ 1.58
CPNE9-205ENST00000613455 AACSQ86V21 672 aa24.91■■□□□ 1.58
CPNE9-205ENST00000613455 PDGFDQ9GZP0 370 aaPredicted RBP24.91■■□□□ 1.58
CPNE9-205ENST00000613455 GSPT1P15170 499 aaKnown RBP24.9■■□□□ 1.58
CPNE9-205ENST00000613455 TNNI3KQ59H18 835 aa24.9■■□□□ 1.58
CPNE9-205ENST00000613455 BMP2KLQ5H9B9 411 aa24.9■■□□□ 1.58
CPNE9-205ENST00000613455 FPGT-TNNI3KV9GXZ4 949 aa24.9■■□□□ 1.58
CPNE9-205ENST00000613455 TTC22Q5TAA0 569 aa24.89■■□□□ 1.58
CPNE9-205ENST00000613455 ZNF609O15014 1411 aa24.89■■□□□ 1.58
CPNE9-205ENST00000613455 CNNM1Q9NRU3 951 aa24.89■■□□□ 1.57
CPNE9-205ENST00000613455 AOX1Q06278 1338 aa24.89■■□□□ 1.57
CPNE9-205ENST00000613455 IFIT2P09913 472 aaKnown RBP24.88■■□□□ 1.57
CPNE9-205ENST00000613455 C8orf34Q49A92 452 aa24.88■■□□□ 1.57
CPNE9-205ENST00000613455 CDC5LQ99459 802 aaKnown RBP24.88■■□□□ 1.57
CPNE9-205ENST00000613455 GPR108Q9NPR9 543 aa24.88■■□□□ 1.57
CPNE9-205ENST00000613455 TLR7Q9NYK1 1049 aaKnown RBP24.88■■□□□ 1.57
CPNE9-205ENST00000613455 A0A1B0GUL6 1792 aa24.87■■□□□ 1.57
CPNE9-205ENST00000613455 CCDC8Q9H0W5 538 aaPredicted RBP24.87■■□□□ 1.57
CPNE9-205ENST00000613455 IGHMBP2P38935 993 aaKnown RBP24.86■■□□□ 1.57
CPNE9-205ENST00000613455 VGLL2Q8N8G2 317 aa24.86■■□□□ 1.57
CPNE9-205ENST00000613455 CEP126Q9P2H0 1117 aa24.86■■□□□ 1.57
CPNE9-205ENST00000613455 PARP3Q9Y6F1 533 aa24.86■■□□□ 1.57
CPNE9-205ENST00000613455 CRY2Q49AN0 593 aa24.86■■□□□ 1.57
CPNE9-205ENST00000613455 PI4K2BQ8TCG2 481 aa24.86■■□□□ 1.57
CPNE9-205ENST00000613455 MPHOSPH8Q99549 860 aa24.86■■□□□ 1.57
CPNE9-205ENST00000613455 TTC41PQ6P2S7 1318 aa24.85■■□□□ 1.57
CPNE9-205ENST00000613455 METTL24Q5JXM2 366 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms