RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 DUOX1Q9NRD9 1551 aa16.18■□□□□ 0.18
CSTF1-208ENST00000613138 GRAPQ13588 217 aa16.18■□□□□ 0.18
CSTF1-208ENST00000613138 SF3B3Q15393 1217 aaKnown RBP16.18■□□□□ 0.18
CSTF1-208ENST00000613138 GRAPLQ8TC17 118 aaPredicted RBP16.18■□□□□ 0.18
CSTF1-208ENST00000613138 RRAGCQ9HB90 399 aa16.18■□□□□ 0.18
CSTF1-208ENST00000613138 ZNF541Q9H0D2 1346 aa16.18■□□□□ 0.18
CSTF1-208ENST00000613138 CASP7P55210 303 aa16.17■□□□□ 0.18
CSTF1-208ENST00000613138 HNRNPUQ00839 825 aaKnown RBP eCLIP16.17■□□□□ 0.18
CSTF1-208ENST00000613138 NEXNQ0ZGT2 675 aa16.17■□□□□ 0.18
CSTF1-208ENST00000613138 GCKRQ14397 625 aa16.17■□□□□ 0.18
CSTF1-208ENST00000613138 BEND3Q5T5X7 828 aa16.17■□□□□ 0.18
CSTF1-208ENST00000613138 SOGA3Q5TF21 947 aa16.17■□□□□ 0.18
CSTF1-208ENST00000613138 ATP6V0A2Q9Y487 856 aa16.17■□□□□ 0.18
CSTF1-208ENST00000613138 H7C1W4 665 aa16.16■□□□□ 0.18
CSTF1-208ENST00000613138 IARSP41252 1262 aaKnown RBP16.16■□□□□ 0.18
CSTF1-208ENST00000613138 RTKN2Q8IZC4 609 aa16.16■□□□□ 0.18
CSTF1-208ENST00000613138 GPR101Q96P66 508 aaPredicted RBP16.16■□□□□ 0.18
CSTF1-208ENST00000613138 LTBP1Q14766 1721 aa16.16■□□□□ 0.18
CSTF1-208ENST00000613138 POTECB2RU33 542 aa16.15■□□□□ 0.18
CSTF1-208ENST00000613138 PDE8AO60658 829 aa16.15■□□□□ 0.18
CSTF1-208ENST00000613138 DDNO94850 711 aaPredicted RBP16.15■□□□□ 0.18
CSTF1-208ENST00000613138 C1QTNF8P60827 252 aa16.15■□□□□ 0.18
CSTF1-208ENST00000613138 SLC4A10Q6U841 1118 aa16.15■□□□□ 0.18
CSTF1-208ENST00000613138 CDHR2Q9BYE9 1310 aa16.15■□□□□ 0.18
CSTF1-208ENST00000613138 GLTPD2A6NH11 291 aa16.14■□□□□ 0.17
CSTF1-208ENST00000613138 BBOX1O75936 387 aa16.14■□□□□ 0.17
CSTF1-208ENST00000613138 CTSWP56202 376 aa16.14■□□□□ 0.17
CSTF1-208ENST00000613138 AOC3Q16853 763 aa16.14■□□□□ 0.17
CSTF1-208ENST00000613138 SP8Q8IXZ3 490 aa16.14■□□□□ 0.17
CSTF1-208ENST00000613138 LINS1Q8NG48 757 aa16.14■□□□□ 0.17
CSTF1-208ENST00000613138 PSMD1Q99460 953 aa16.14■□□□□ 0.17
CSTF1-208ENST00000613138 GREM2Q9H772 168 aa16.14■□□□□ 0.17
CSTF1-208ENST00000613138 WDR90Q96KV7 1748 aa16.14■□□□□ 0.17
CSTF1-208ENST00000613138 WTIPA6NIX2 430 aaPredicted RBP16.13■□□□□ 0.17
CSTF1-208ENST00000613138 GPSM2P81274 684 aa16.13■□□□□ 0.17
CSTF1-208ENST00000613138 EPHA10Q5JZY3 1008 aa16.13■□□□□ 0.17
CSTF1-208ENST00000613138 TTLL11Q8NHH1 800 aa16.13■□□□□ 0.17
CSTF1-208ENST00000613138 RPS8P62241 208 aaKnown RBP16.12■□□□□ 0.17
CSTF1-208ENST00000613138 MPNDQ8N594 471 aa16.12■□□□□ 0.17
CSTF1-208ENST00000613138 SMC4Q9NTJ3 1288 aa16.12■□□□□ 0.17
CSTF1-208ENST00000613138 PPIP5K2O43314 1243 aa16.11■□□□□ 0.17
CSTF1-208ENST00000613138 FAM161AQ3B820 660 aa16.11■□□□□ 0.17
CSTF1-208ENST00000613138 CCDC152Q4G0S7 254 aa16.11■□□□□ 0.17
CSTF1-208ENST00000613138 CC2D2BQ6DHV5 1058 aa16.11■□□□□ 0.17
CSTF1-208ENST00000613138 DPP8Q6V1X1 898 aaPredicted RBP16.11■□□□□ 0.17
CSTF1-208ENST00000613138 LARGE2Q8N3Y3 721 aa16.11■□□□□ 0.17
CSTF1-208ENST00000613138 KDM2BQ8NHM5 1336 aa16.11■□□□□ 0.17
CSTF1-208ENST00000613138 ZC3H4Q9UPT8 1303 aaKnown RBP16.11■□□□□ 0.17
CSTF1-208ENST00000613138 SCN9AQ15858 1988 aa16.1■□□□□ 0.17
CSTF1-208ENST00000613138 POLLQ9UGP5 575 aa16.1■□□□□ 0.17
CSTF1-208ENST00000613138 NSFL1CQ9UNZ2 370 aaKnown RBP16.1■□□□□ 0.17
CSTF1-208ENST00000613138 TNNQ9UQP3 1299 aa16.1■□□□□ 0.17
CSTF1-208ENST00000613138 A0A1B0GUL6 1792 aa16.1■□□□□ 0.17
CSTF1-208ENST00000613138 FZD9O00144 591 aa16.09■□□□□ 0.17
CSTF1-208ENST00000613138 RIMBP2O15034 1052 aa16.09■□□□□ 0.17
CSTF1-208ENST00000613138 POTEIP0CG38 1075 aa16.09■□□□□ 0.17
CSTF1-208ENST00000613138 POTEJP0CG39 1038 aa16.09■□□□□ 0.17
CSTF1-208ENST00000613138 FOXO4P98177 505 aa16.09■□□□□ 0.17
CSTF1-208ENST00000613138 RTFDC1Q9BY42 306 aaPredicted RBP16.09■□□□□ 0.17
CSTF1-208ENST00000613138 NOB1Q9ULX3 412 aaKnown RBP16.09■□□□□ 0.17
CSTF1-208ENST00000613138 NBPF7P0C2Y1 421 aaPredicted RBP16.08■□□□□ 0.16
CSTF1-208ENST00000613138 RARSP54136 660 aaKnown RBP16.08■□□□□ 0.16
CSTF1-208ENST00000613138 KAZALD1Q96I82 304 aa16.08■□□□□ 0.16
CSTF1-208ENST00000613138 SUCLG2Q96I99 432 aa16.08■□□□□ 0.16
CSTF1-208ENST00000613138 PLA2G12BQ9BX93 195 aa16.08■□□□□ 0.16
CSTF1-208ENST00000613138 SRCIN1Q9C0H9 1055 aa16.08■□□□□ 0.16
CSTF1-208ENST00000613138 GRM8O00222 908 aa16.07■□□□□ 0.16
CSTF1-208ENST00000613138 ITGA6P23229 1130 aa16.07■□□□□ 0.16
CSTF1-208ENST00000613138 ALDH1L2Q3SY69 923 aa16.07■□□□□ 0.16
CSTF1-208ENST00000613138 DPY19L2Q6NUT2 758 aa16.07■□□□□ 0.16
CSTF1-208ENST00000613138 ANKRD18AQ8IVF6 992 aa16.07■□□□□ 0.16
CSTF1-208ENST00000613138 GJA3Q9Y6H8 435 aa16.07■□□□□ 0.16
CSTF1-208ENST00000613138 SCN4AP35499 1836 aa16.06■□□□□ 0.16
CSTF1-208ENST00000613138 YDJCA8MPS7 323 aa16.06■□□□□ 0.16
CSTF1-208ENST00000613138 C6orf229H3BNL8 230 aa16.06■□□□□ 0.16
CSTF1-208ENST00000613138 BCAR3O75815 825 aa16.06■□□□□ 0.16
CSTF1-208ENST00000613138 CSF1RP07333 972 aa16.06■□□□□ 0.16
CSTF1-208ENST00000613138 NIM1KQ8IY84 436 aa16.06■□□□□ 0.16
CSTF1-208ENST00000613138 TBC1D16Q8TBP0 767 aa16.06■□□□□ 0.16
CSTF1-208ENST00000613138 JDP2Q8WYK2 163 aa16.06■□□□□ 0.16
CSTF1-208ENST00000613138 ZNF594Q96JF6 807 aaPredicted RBP16.06■□□□□ 0.16
CSTF1-208ENST00000613138 TMX4Q9H1E5 349 aaPredicted RBP16.06■□□□□ 0.16
CSTF1-208ENST00000613138 DBNDD1Q9H9R9 158 aa16.06■□□□□ 0.16
CSTF1-208ENST00000613138 KCNQ5Q9NR82 932 aa16.06■□□□□ 0.16
CSTF1-208ENST00000613138 C9orf78Q9NZ63 289 aaPredicted RBP16.06■□□□□ 0.16
CSTF1-208ENST00000613138 CHMP3Q9Y3E7 222 aa16.06■□□□□ 0.16
CSTF1-208ENST00000613138 PTPRCP08575 1304 aa16.05■□□□□ 0.16
CSTF1-208ENST00000613138 SNAP23O00161 211 aa16.05■□□□□ 0.16
CSTF1-208ENST00000613138 ALDH1L1O75891 902 aa16.05■□□□□ 0.16
CSTF1-208ENST00000613138 TOMM70O94826 608 aa16.05■□□□□ 0.16
CSTF1-208ENST00000613138 VEGFAP15692 232 aaPredicted RBP16.05■□□□□ 0.16
CSTF1-208ENST00000613138 KIAA2012Q0VF49 1180 aa16.05■□□□□ 0.16
CSTF1-208ENST00000613138 DOK7Q18PE1 504 aa16.05■□□□□ 0.16
CSTF1-208ENST00000613138 LMBR1LQ6UX01 489 aa16.05■□□□□ 0.16
CSTF1-208ENST00000613138 CEP350Q5VT06 3117 aa16.05■□□□□ 0.16
CSTF1-208ENST00000613138 RTL9Q8NET4 1388 aa16.04■□□□□ 0.16
CSTF1-208ENST00000613138 SHTN1A0MZ66 631 aa16.04■□□□□ 0.16
CSTF1-208ENST00000613138 RAD17O75943 681 aa16.04■□□□□ 0.16
CSTF1-208ENST00000613138 UFL1O94874 794 aa16.04■□□□□ 0.16
CSTF1-208ENST00000613138 HSP90B1P14625 803 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms