RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 MAPK8IP3Q9UPT6 1336 aa30.89■■■□□ 2.54
MMP28-203ENST00000612672 YDJCA8MPS7 323 aa30.88■■■□□ 2.53
MMP28-203ENST00000612672 RAD17O75943 681 aa30.88■■■□□ 2.53
MMP28-203ENST00000612672 CELF2O95319 508 aaKnown RBP30.88■■■□□ 2.53
MMP28-203ENST00000612672 KIAA2012Q0VF49 1180 aa30.88■■■□□ 2.53
MMP28-203ENST00000612672 VPS33BQ9H267 617 aa30.88■■■□□ 2.53
MMP28-203ENST00000612672 DPP8Q6V1X1 898 aaPredicted RBP30.87■■■□□ 2.53
MMP28-203ENST00000612672 SP8Q8IXZ3 490 aa30.87■■■□□ 2.53
MMP28-203ENST00000612672 PGAP2Q9UHJ9 254 aa30.87■■■□□ 2.53
MMP28-203ENST00000612672 DLK2Q6UY11 383 aa30.86■■■□□ 2.53
MMP28-203ENST00000612672 COPS6Q7L5N1 327 aa30.86■■■□□ 2.53
MMP28-203ENST00000612672 XAGE3Q8WTP9 111 aa30.86■■■□□ 2.53
MMP28-203ENST00000612672 AIMP1Q12904 312 aaKnown RBP30.85■■■□□ 2.53
MMP28-203ENST00000612672 KRT24Q2M2I5 525 aa30.85■■■□□ 2.53
MMP28-203ENST00000612672 CIAPIN1Q6FI81 312 aa30.85■■■□□ 2.53
MMP28-203ENST00000612672 MPNDQ8N594 471 aa30.85■■■□□ 2.53
MMP28-203ENST00000612672 SUPT20HQ8NEM7 779 aa30.85■■■□□ 2.53
MMP28-203ENST00000612672 TNRC18O15417 2968 aaPredicted RBP30.84■■■□□ 2.53
MMP28-203ENST00000612672 POLR2AP24928 1970 aaKnown RBP30.83■■■□□ 2.53
MMP28-203ENST00000612672 BBOX1O75936 387 aa30.83■■■□□ 2.53
MMP28-203ENST00000612672 RIPK4P57078 832 aa30.83■■■□□ 2.53
MMP28-203ENST00000612672 MAP2K2P36507 400 aa30.82■■■□□ 2.52
MMP28-203ENST00000612672 GRAPQ13588 217 aa30.82■■■□□ 2.52
MMP28-203ENST00000612672 GRAPLQ8TC17 118 aaPredicted RBP30.82■■■□□ 2.52
MMP28-203ENST00000612672 ZIC5Q96T25 663 aa30.82■■■□□ 2.52
MMP28-203ENST00000612672 BEGAINQ9BUH8 593 aa30.82■■■□□ 2.52
MMP28-203ENST00000612672 CDHR2Q9BYE9 1310 aa30.81■■■□□ 2.52
MMP28-203ENST00000612672 TMX4Q9H1E5 349 aaPredicted RBP30.81■■■□□ 2.52
MMP28-203ENST00000612672 ZNF408Q9H9D4 720 aa30.81■■■□□ 2.52
MMP28-203ENST00000612672 CCDC85CA6NKD9 419 aa30.8■■■□□ 2.52
MMP28-203ENST00000612672 TCIRG1Q13488 830 aa30.8■■■□□ 2.52
MMP28-203ENST00000612672 BCL2L13Q9BXK5 485 aa30.8■■■□□ 2.52
MMP28-203ENST00000612672 TRMT112Q9UI30 125 aaKnown RBP30.8■■■□□ 2.52
MMP28-203ENST00000612672 DDX46Q7L014 1031 aaKnown RBP30.79■■■□□ 2.52
MMP28-203ENST00000612672 SH3TC1Q8TE82 1336 aa30.78■■■□□ 2.52
MMP28-203ENST00000612672 SCN9AQ15858 1988 aa30.78■■■□□ 2.52
MMP28-203ENST00000612672 TMPOP42166 694 aaKnown RBP30.78■■■□□ 2.52
MMP28-203ENST00000612672 CNOT7Q9UIV1 285 aaKnown RBP30.78■■■□□ 2.52
MMP28-203ENST00000612672 ZBTB12Q9Y330 459 aaPredicted RBP30.78■■■□□ 2.52
MMP28-203ENST00000612672 EGFRP00533 1210 aa30.77■■■□□ 2.52
MMP28-203ENST00000612672 HSP90AB3PQ58FF7 597 aa30.77■■■□□ 2.52
MMP28-203ENST00000612672 HHIPL1Q96JK4 782 aa30.77■■■□□ 2.52
MMP28-203ENST00000612672 MICALL2Q8IY33 904 aa30.76■■■□□ 2.51
MMP28-203ENST00000612672 ZC3H15Q8WU90 426 aaKnown RBP30.76■■■□□ 2.51
MMP28-203ENST00000612672 PNNQ9H307 717 aaKnown RBP30.76■■■□□ 2.51
MMP28-203ENST00000612672 BABAM1Q9NWV8 329 aa30.76■■■□□ 2.51
MMP28-203ENST00000612672 TNIP1Q15025 636 aa30.75■■■□□ 2.51
MMP28-203ENST00000612672 CELF1Q92879 486 aaKnown RBP30.75■■■□□ 2.51
MMP28-203ENST00000612672 CHPF2Q9P2E5 772 aa30.75■■■□□ 2.51
MMP28-203ENST00000612672 BRPF1P55201 1214 aaPredicted RBP30.74■■■□□ 2.51
MMP28-203ENST00000612672 SAMD7Q7Z3H4 446 aa30.74■■■□□ 2.51
MMP28-203ENST00000612672 USP48Q86UV5 1035 aa30.74■■■□□ 2.51
MMP28-203ENST00000612672 MCOLN1Q9GZU1 580 aa30.74■■■□□ 2.51
MMP28-203ENST00000612672 PSMD14O00487 310 aa30.73■■■□□ 2.51
MMP28-203ENST00000612672 SLC34A2O95436 690 aa30.73■■■□□ 2.51
MMP28-203ENST00000612672 RGS19P49795 217 aa30.73■■■□□ 2.51
MMP28-203ENST00000612672 CDC37L1Q7L3B6 337 aa30.73■■■□□ 2.51
MMP28-203ENST00000612672 DBNDD1Q9H9R9 158 aa30.73■■■□□ 2.51
MMP28-203ENST00000612672 KCNQ5Q9NR82 932 aa30.73■■■□□ 2.51
MMP28-203ENST00000612672 RTL9Q8NET4 1388 aa30.72■■■□□ 2.51
MMP28-203ENST00000612672 CCDC146Q8IYE0 955 aa30.71■■■□□ 2.51
MMP28-203ENST00000612672 CHL1O00533 1208 aa30.7■■■□□ 2.51
MMP28-203ENST00000612672 FAM89AQ96GI7 184 aa30.7■■■□□ 2.51
MMP28-203ENST00000612672 ISCA1Q9BUE6 129 aa30.7■■■□□ 2.51
MMP28-203ENST00000612672 POLLQ9UGP5 575 aa30.7■■■□□ 2.51
MMP28-203ENST00000612672 RIMBP2O15034 1052 aa30.69■■■□□ 2.5
MMP28-203ENST00000612672 GPSM2P81274 684 aa30.69■■■□□ 2.5
MMP28-203ENST00000612672 TBC1D10BQ4KMP7 808 aaPredicted RBP30.69■■■□□ 2.5
MMP28-203ENST00000612672 ATP5J2-PTCD1G3V325 749 aa30.68■■■□□ 2.5
MMP28-203ENST00000612672 H7C1D1 291 aa30.68■■■□□ 2.5
MMP28-203ENST00000612672 CA12O43570 354 aa30.68■■■□□ 2.5
MMP28-203ENST00000612672 HUNKP57058 714 aa30.68■■■□□ 2.5
MMP28-203ENST00000612672 MLLT1Q03111 559 aaPredicted RBP30.68■■■□□ 2.5
MMP28-203ENST00000612672 NEUROD2Q15784 382 aa30.68■■■□□ 2.5
MMP28-203ENST00000612672 TRIM35Q9UPQ4 493 aa30.68■■■□□ 2.5
MMP28-203ENST00000612672 ADM5C9JUS6 153 aa30.67■■■□□ 2.5
MMP28-203ENST00000612672 WASHC4Q2M389 1173 aa30.67■■■□□ 2.5
MMP28-203ENST00000612672 TMC4Q7Z404 712 aa30.67■■■□□ 2.5
MMP28-203ENST00000612672 DPF2Q92785 391 aa30.67■■■□□ 2.5
MMP28-203ENST00000612672 NSFL1CQ9UNZ2 370 aaKnown RBP30.67■■■□□ 2.5
MMP28-203ENST00000612672 FAM155AB1AL88 458 aaPredicted RBP30.66■■■□□ 2.5
MMP28-203ENST00000612672 LMOD3Q0VAK6 560 aa30.66■■■□□ 2.5
MMP28-203ENST00000612672 SF3B3Q15393 1217 aaKnown RBP30.66■■■□□ 2.5
MMP28-203ENST00000612672 RTL5Q5HYW3 569 aaPredicted RBP30.66■■■□□ 2.5
MMP28-203ENST00000612672 PLBD2Q8NHP8 589 aa30.66■■■□□ 2.5
MMP28-203ENST00000612672 DOK7Q18PE1 504 aa30.65■■■□□ 2.5
MMP28-203ENST00000612672 PSME4Q14997 1843 aa30.64■■■□□ 2.5
MMP28-203ENST00000612672 ECE2O60344 883 aa30.64■■■□□ 2.5
MMP28-203ENST00000612672 NOGQ13253 232 aa30.64■■■□□ 2.5
MMP28-203ENST00000612672 HDGFL1Q5TGJ6 251 aa30.64■■■□□ 2.5
MMP28-203ENST00000612672 LAS1LQ9Y4W2 734 aaKnown RBP30.64■■■□□ 2.5
MMP28-203ENST00000612672 ASTN2O75129 1339 aaPredicted RBP30.64■■■□□ 2.5
MMP28-203ENST00000612672 DGKZQ13574 1117 aa30.63■■■□□ 2.49
MMP28-203ENST00000612672 KRT26Q7Z3Y9 468 aa30.63■■■□□ 2.49
MMP28-203ENST00000612672 C6orf229H3BNL8 230 aa30.62■■■□□ 2.49
MMP28-203ENST00000612672 ANKRD13DQ6ZTN6 518 aa30.62■■■□□ 2.49
MMP28-203ENST00000612672 RBM26Q5T8P6 1007 aaKnown RBP30.61■■■□□ 2.49
MMP28-203ENST00000612672 TBC1D16Q8TBP0 767 aa30.61■■■□□ 2.49
MMP28-203ENST00000612672 CFAP44Q96MT7 982 aa30.6■■■□□ 2.49
MMP28-203ENST00000612672 GBA2Q9HCG7 927 aaPredicted RBP30.6■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms