RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 B4GALNT3Q6L9W6 998 aa16.01■□□□□ 0.15
PRKN-210ENST00000612540 CEP85Q6P2H3 762 aa16.01■□□□□ 0.15
PRKN-210ENST00000612540 CCDC24Q8N4L8 307 aa16.01■□□□□ 0.15
PRKN-210ENST00000612540 HMMRO75330 724 aa16■□□□□ 0.15
PRKN-210ENST00000612540 ST5P78524 1137 aa16■□□□□ 0.15
PRKN-210ENST00000612540 EPHA10Q5JZY3 1008 aa16■□□□□ 0.15
PRKN-210ENST00000612540 ANKRD44Q8N8A2 993 aa16■□□□□ 0.15
PRKN-210ENST00000612540 KAZALD1Q96I82 304 aa16■□□□□ 0.15
PRKN-210ENST00000612540 PDE8AO60658 829 aa15.99■□□□□ 0.15
PRKN-210ENST00000612540 PRR5LQ6MZQ0 368 aa15.99■□□□□ 0.15
PRKN-210ENST00000612540 LMBR1LQ6UX01 489 aa15.99■□□□□ 0.15
PRKN-210ENST00000612540 RPAP2Q8IXW5 612 aaPredicted RBP15.99■□□□□ 0.15
PRKN-210ENST00000612540 CCDC85AQ96PX6 553 aaPredicted RBP15.99■□□□□ 0.15
PRKN-210ENST00000612540 ARFGEF1Q9Y6D6 1849 aa15.98■□□□□ 0.15
PRKN-210ENST00000612540 SRGAP3O43295 1099 aa15.98■□□□□ 0.15
PRKN-210ENST00000612540 CTSWP56202 376 aa15.98■□□□□ 0.15
PRKN-210ENST00000612540 ATP8B2P98198 1209 aa15.98■□□□□ 0.15
PRKN-210ENST00000612540 PLA2G12BQ9BX93 195 aa15.98■□□□□ 0.15
PRKN-210ENST00000612540 RWDD1Q9H446 243 aaPredicted RBP15.98■□□□□ 0.15
PRKN-210ENST00000612540 NRXN2Q9P2S2 1712 aa15.98■□□□□ 0.15
PRKN-210ENST00000612540 TNRC6CQ9HCJ0 1690 aaKnown RBP15.98■□□□□ 0.15
PRKN-210ENST00000612540 C10orf71Q711Q0 1435 aa15.97■□□□□ 0.15
PRKN-210ENST00000612540 PNMA6EA0A0J9YXQ4 647 aa15.97■□□□□ 0.15
PRKN-210ENST00000612540 FOXO4P98177 505 aa15.97■□□□□ 0.15
PRKN-210ENST00000612540 TGFB2P61812 414 aa15.96■□□□□ 0.15
PRKN-210ENST00000612540 FAM161AQ3B820 660 aa15.96■□□□□ 0.15
PRKN-210ENST00000612540 RABL6Q3YEC7 729 aaPredicted RBP15.96■□□□□ 0.15
PRKN-210ENST00000612540 SIRT2Q8IXJ6 389 aa15.96■□□□□ 0.15
PRKN-210ENST00000612540 ZNF526Q8TF50 670 aaPredicted RBP15.96■□□□□ 0.15
PRKN-210ENST00000612540 ANKRD31Q8N7Z5 1873 aa15.96■□□□□ 0.15
PRKN-210ENST00000612540 CEP350Q5VT06 3117 aa15.96■□□□□ 0.14
PRKN-210ENST00000612540 MTX1Q13505 466 aa15.95■□□□□ 0.14
PRKN-210ENST00000612540 HDAC1Q13547 482 aaPredicted RBP15.95■□□□□ 0.14
PRKN-210ENST00000612540 CCDC152Q4G0S7 254 aa15.95■□□□□ 0.14
PRKN-210ENST00000612540 TAF7LQ5H9L4 462 aa15.95■□□□□ 0.14
PRKN-210ENST00000612540 NLRP3Q96P20 1036 aa15.95■□□□□ 0.14
PRKN-210ENST00000612540 SPEF2Q9C093 1822 aa15.95■□□□□ 0.14
PRKN-210ENST00000612540 IGHDP01880 384 aa15.94■□□□□ 0.14
PRKN-210ENST00000612540 CCDC57Q2TAC2 916 aa15.94■□□□□ 0.14
PRKN-210ENST00000612540 SLC10A5Q5PT55 438 aa15.94■□□□□ 0.14
PRKN-210ENST00000612540 C3orf67Q6ZVT6 689 aa15.94■□□□□ 0.14
PRKN-210ENST00000612540 TTLL11Q8NHH1 800 aa15.94■□□□□ 0.14
PRKN-210ENST00000612540 GPBP1L1Q9HC44 474 aaPredicted RBP15.94■□□□□ 0.14
PRKN-210ENST00000612540 RIC1Q4ADV7 1423 aa15.94■□□□□ 0.14
PRKN-210ENST00000612540 A0A0G2JLW4 131 aa15.93■□□□□ 0.14
PRKN-210ENST00000612540 IFIT5Q13325 482 aaKnown RBP15.93■□□□□ 0.14
PRKN-210ENST00000612540 OS9Q13438 667 aaPredicted RBP15.93■□□□□ 0.14
PRKN-210ENST00000612540 POLA2Q14181 598 aa15.93■□□□□ 0.14
PRKN-210ENST00000612540 SSH3Q8TE77 659 aa15.93■□□□□ 0.14
PRKN-210ENST00000612540 GREM2Q9H772 168 aa15.93■□□□□ 0.14
PRKN-210ENST00000612540 TAF1P21675 1872 aa15.93■□□□□ 0.14
PRKN-210ENST00000612540 ANKRD18BA2A2Z9 1011 aa15.92■□□□□ 0.14
PRKN-210ENST00000612540 APBB1O00213 710 aa15.92■□□□□ 0.14
PRKN-210ENST00000612540 CSF1RP07333 972 aa15.92■□□□□ 0.14
PRKN-210ENST00000612540 ITGA6P23229 1130 aa15.92■□□□□ 0.14
PRKN-210ENST00000612540 CENPQQ7L2Z9 268 aaPredicted RBP15.92■□□□□ 0.14
PRKN-210ENST00000612540 KLHDC4Q8TBB5 520 aa15.92■□□□□ 0.14
PRKN-210ENST00000612540 SIL1Q9H173 461 aa15.92■□□□□ 0.14
PRKN-210ENST00000612540 PA2G4Q9UQ80 394 aaKnown RBP15.92■□□□□ 0.14
PRKN-210ENST00000612540 SBF1O95248 1867 aa15.92■□□□□ 0.14
PRKN-210ENST00000612540 CCDC88AQ3V6T2 1871 aa15.92■□□□□ 0.14
PRKN-210ENST00000612540 SURF6O75683 361 aaKnown RBP15.91■□□□□ 0.14
PRKN-210ENST00000612540 DPEP1P16444 411 aa15.91■□□□□ 0.14
PRKN-210ENST00000612540 RPGRQ92834 1020 aaKnown RBP15.91■□□□□ 0.14
PRKN-210ENST00000612540 BCL11AQ9H165 835 aa15.91■□□□□ 0.14
PRKN-210ENST00000612540 EXOC6BQ9Y2D4 811 aa15.91■□□□□ 0.14
PRKN-210ENST00000612540 COL11A2P13942 1736 aaPredicted RBP15.91■□□□□ 0.14
PRKN-210ENST00000612540 KCNA3P22001 575 aa15.9■□□□□ 0.14
PRKN-210ENST00000612540 SF3B3Q15393 1217 aaKnown RBP15.9■□□□□ 0.14
PRKN-210ENST00000612540 DDX46Q7L014 1031 aaKnown RBP15.9■□□□□ 0.14
PRKN-210ENST00000612540 ZNF594Q96JF6 807 aaPredicted RBP15.9■□□□□ 0.14
PRKN-210ENST00000612540 BRIP1Q9BX63 1249 aa15.9■□□□□ 0.14
PRKN-210ENST00000612540 SEC31BQ9NQW1 1179 aa15.9■□□□□ 0.14
PRKN-210ENST00000612540 ZBTB47Q9UFB7 747 aaPredicted RBP15.9■□□□□ 0.14
PRKN-210ENST00000612540 BCS1LQ9Y276 419 aa15.9■□□□□ 0.14
PRKN-210ENST00000612540 CACNA1SQ13698 1873 aa15.9■□□□□ 0.14
PRKN-210ENST00000612540 RTL9Q8NET4 1388 aa15.89■□□□□ 0.13
PRKN-210ENST00000612540 PDE6BP35913 854 aa15.89■□□□□ 0.13
PRKN-210ENST00000612540 RFX5P48382 616 aaPredicted RBP15.89■□□□□ 0.13
PRKN-210ENST00000612540 G3BP1Q13283 466 aaKnown RBP eCLIP15.89■□□□□ 0.13
PRKN-210ENST00000612540 GCC1Q96CN9 775 aa15.89■□□□□ 0.13
PRKN-210ENST00000612540 CDC5LQ99459 802 aaKnown RBP15.89■□□□□ 0.13
PRKN-210ENST00000612540 KDM2BQ8NHM5 1336 aa15.89■□□□□ 0.13
PRKN-210ENST00000612540 IGHMBP2P38935 993 aaKnown RBP15.88■□□□□ 0.13
PRKN-210ENST00000612540 PTPN12Q05209 780 aaKnown RBP15.88■□□□□ 0.13
PRKN-210ENST00000612540 HSP90AB4PQ58FF6 505 aa15.88■□□□□ 0.13
PRKN-210ENST00000612540 DCTPP1Q9H773 170 aa15.88■□□□□ 0.13
PRKN-210ENST00000612540 COPRSQ9NQ92 184 aa15.88■□□□□ 0.13
PRKN-210ENST00000612540 C2CD5Q86YS7 1000 aa15.87■□□□□ 0.13
PRKN-210ENST00000612540 ANKRD18AQ8IVF6 992 aa15.87■□□□□ 0.13
PRKN-210ENST00000612540 RBM17Q96I25 401 aaKnown RBP15.87■□□□□ 0.13
PRKN-210ENST00000612540 MPHOSPH8Q99549 860 aa15.87■□□□□ 0.13
PRKN-210ENST00000612540 CNNM1Q9NRU3 951 aa15.87■□□□□ 0.13
PRKN-210ENST00000612540 DLEC1Q9Y238 1755 aa15.87■□□□□ 0.13
PRKN-210ENST00000612540 KIF3CO14782 793 aa15.86■□□□□ 0.13
PRKN-210ENST00000612540 CRY2Q49AN0 593 aa15.86■□□□□ 0.13
PRKN-210ENST00000612540 ANKRD45Q5TZF3 282 aa15.86■□□□□ 0.13
PRKN-210ENST00000612540 SMC5Q8IY18 1101 aa15.86■□□□□ 0.13
PRKN-210ENST00000612540 COL4A1P02462 1669 aa15.86■□□□□ 0.13
PRKN-210ENST00000612540 H0YIN7 160 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms