RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 UPF2Q9HAU5 1272 aaKnown RBP24.23■■□□□ 1.47
SRRM3-205ENST00000612155 UTYO14607 1347 aa24.22■■□□□ 1.47
SRRM3-205ENST00000612155 SOCS7O14512 581 aa24.22■■□□□ 1.47
SRRM3-205ENST00000612155 IRS4O14654 1257 aaPredicted RBP24.22■■□□□ 1.47
SRRM3-205ENST00000612155 SMARCA5O60264 1052 aaPredicted RBP24.22■■□□□ 1.47
SRRM3-205ENST00000612155 ABCC12Q96J65 1359 aa24.22■■□□□ 1.47
SRRM3-205ENST00000612155 BICC1Q9H694 974 aaKnown RBP24.22■■□□□ 1.47
SRRM3-205ENST00000612155 COL24A1Q17RW2 1714 aa24.21■■□□□ 1.47
SRRM3-205ENST00000612155 SH3TC1Q8TE82 1336 aa24.21■■□□□ 1.47
SRRM3-205ENST00000612155 RGL2O15211 777 aa24.21■■□□□ 1.47
SRRM3-205ENST00000612155 GNAI2P04899 355 aa24.21■■□□□ 1.47
SRRM3-205ENST00000612155 CASZ1Q86V15 1759 aa24.21■■□□□ 1.47
SRRM3-205ENST00000612155 GSPT1P15170 499 aaKnown RBP24.2■■□□□ 1.47
SRRM3-205ENST00000612155 PRR5LQ6MZQ0 368 aa24.2■■□□□ 1.47
SRRM3-205ENST00000612155 C3orf67Q6ZVT6 689 aa24.2■■□□□ 1.47
SRRM3-205ENST00000612155 C22orf23Q9BZE7 217 aa24.2■■□□□ 1.46
SRRM3-205ENST00000612155 TPTE2Q6XPS3 522 aa24.19■■□□□ 1.46
SRRM3-205ENST00000612155 CNBD1Q8NA66 436 aa24.19■■□□□ 1.46
SRRM3-205ENST00000612155 DAXXQ9UER7 740 aaPredicted RBP24.19■■□□□ 1.46
SRRM3-205ENST00000612155 PARP3Q9Y6F1 533 aa24.19■■□□□ 1.46
SRRM3-205ENST00000612155 APBB1O00213 710 aa24.18■■□□□ 1.46
SRRM3-205ENST00000612155 FOXO4P98177 505 aa24.18■■□□□ 1.46
SRRM3-205ENST00000612155 PNMA6EA0A0J9YXQ4 647 aa24.17■■□□□ 1.46
SRRM3-205ENST00000612155 NYXQ9GZU5 481 aa24.17■■□□□ 1.46
SRRM3-205ENST00000612155 CHMP3Q9Y3E7 222 aa24.17■■□□□ 1.46
SRRM3-205ENST00000612155 LMBR1LQ6UX01 489 aa24.16■■□□□ 1.46
SRRM3-205ENST00000612155 SLC16A10Q8TF71 515 aa24.16■■□□□ 1.46
SRRM3-205ENST00000612155 TBC1D9Q6ZT07 1266 aa24.15■■□□□ 1.46
SRRM3-205ENST00000612155 MTFR1LQ9H019 292 aa24.15■■□□□ 1.46
SRRM3-205ENST00000612155 DDX60Q8IY21 1712 aaKnown RBP24.15■■□□□ 1.46
SRRM3-205ENST00000612155 CDHR2Q9BYE9 1310 aa24.14■■□□□ 1.46
SRRM3-205ENST00000612155 TBC1D2Q9BYX2 928 aa24.14■■□□□ 1.45
SRRM3-205ENST00000612155 ATP8B2P98198 1209 aa24.13■■□□□ 1.45
SRRM3-205ENST00000612155 KLHDC4Q8TBB5 520 aa24.13■■□□□ 1.45
SRRM3-205ENST00000612155 HMMRO75330 724 aa24.13■■□□□ 1.45
SRRM3-205ENST00000612155 TTC22Q5TAA0 569 aa24.13■■□□□ 1.45
SRRM3-205ENST00000612155 TNRC6CQ9HCJ0 1690 aaKnown RBP24.13■■□□□ 1.45
SRRM3-205ENST00000612155 IBTKQ9P2D0 1353 aaPredicted RBP24.12■■□□□ 1.45
SRRM3-205ENST00000612155 PDE8AO60658 829 aa24.12■■□□□ 1.45
SRRM3-205ENST00000612155 SRGAP3O43295 1099 aa24.12■■□□□ 1.45
SRRM3-205ENST00000612155 CTSWP56202 376 aa24.12■■□□□ 1.45
SRRM3-205ENST00000612155 TTLL11Q8NHH1 800 aa24.12■■□□□ 1.45
SRRM3-205ENST00000612155 ST5P78524 1137 aa24.11■■□□□ 1.45
SRRM3-205ENST00000612155 GREM2Q9H772 168 aa24.11■■□□□ 1.45
SRRM3-205ENST00000612155 EXOC6BQ9Y2D4 811 aa24.11■■□□□ 1.45
SRRM3-205ENST00000612155 PA2G4Q9UQ80 394 aaKnown RBP24.1■■□□□ 1.45
SRRM3-205ENST00000612155 RBM25P49756 843 aaKnown RBP24.09■■□□□ 1.45
SRRM3-205ENST00000612155 BECN1Q14457 450 aa24.09■■□□□ 1.45
SRRM3-205ENST00000612155 ZNF594Q96JF6 807 aaPredicted RBP24.09■■□□□ 1.45
SRRM3-205ENST00000612155 PLA2G12BQ9BX93 195 aa24.09■■□□□ 1.45
SRRM3-205ENST00000612155 SEC31BQ9NQW1 1179 aa24.09■■□□□ 1.45
SRRM3-205ENST00000612155 RABL6Q3YEC7 729 aaPredicted RBP24.09■■□□□ 1.45
SRRM3-205ENST00000612155 SLC10A5Q5PT55 438 aa24.09■■□□□ 1.45
SRRM3-205ENST00000612155 NRXN2Q9P2S2 1712 aa24.09■■□□□ 1.45
SRRM3-205ENST00000612155 TAF1P21675 1872 aa24.08■■□□□ 1.45
SRRM3-205ENST00000612155 PTGER2P43116 358 aa24.08■■□□□ 1.45
SRRM3-205ENST00000612155 NLRP3Q96P20 1036 aa24.08■■□□□ 1.45
SRRM3-205ENST00000612155 PPP1R1BQ9UD71 204 aaPredicted RBP24.08■■□□□ 1.45
SRRM3-205ENST00000612155 UTRNP46939 3433 aa24.08■■□□□ 1.45
SRRM3-205ENST00000612155 MYH3P11055 1940 aa24.08■■□□□ 1.45
SRRM3-205ENST00000612155 COL4A1P02462 1669 aa24.08■■□□□ 1.45
SRRM3-205ENST00000612155 LAMB2P55268 1798 aa24.08■■□□□ 1.44
SRRM3-205ENST00000612155 KLHL34Q8N239 644 aa24.08■■□□□ 1.44
SRRM3-205ENST00000612155 ANKRD31Q8N7Z5 1873 aa24.07■■□□□ 1.44
SRRM3-205ENST00000612155 CDC45O75419 566 aa24.07■■□□□ 1.44
SRRM3-205ENST00000612155 CSF1RP07333 972 aa24.07■■□□□ 1.44
SRRM3-205ENST00000612155 SGIP1Q9BQI5 828 aa24.07■■□□□ 1.44
SRRM3-205ENST00000612155 POLD1P28340 1107 aa24.06■■□□□ 1.44
SRRM3-205ENST00000612155 SIL1Q9H173 461 aa24.06■■□□□ 1.44
SRRM3-205ENST00000612155 SALL3Q9BXA9 1300 aa24.06■■□□□ 1.44
SRRM3-205ENST00000612155 ITGA6P23229 1130 aa24.06■■□□□ 1.44
SRRM3-205ENST00000612155 SLC51AQ86UW1 340 aa24.06■■□□□ 1.44
SRRM3-205ENST00000612155 KIF2CQ99661 725 aa24.06■■□□□ 1.44
SRRM3-205ENST00000612155 HDAC5Q9UQL6 1122 aa24.05■■□□□ 1.44
SRRM3-205ENST00000612155 SDSP20132 328 aa24.05■■□□□ 1.44
SRRM3-205ENST00000612155 NFKBIBQ15653 356 aa24.05■■□□□ 1.44
SRRM3-205ENST00000612155 MTX1Q13505 466 aa24.04■■□□□ 1.44
SRRM3-205ENST00000612155 ANTXR1Q9H6X2 564 aa24.04■■□□□ 1.44
SRRM3-205ENST00000612155 WWC3Q9ULE0 1092 aa24.04■■□□□ 1.44
SRRM3-205ENST00000612155 CHRNA5P30532 468 aa24.03■■□□□ 1.44
SRRM3-205ENST00000612155 RFX5P48382 616 aaPredicted RBP24.03■■□□□ 1.44
SRRM3-205ENST00000612155 SSH3Q8TE77 659 aa24.03■■□□□ 1.44
SRRM3-205ENST00000612155 PDE1AP54750 535 aa24.03■■□□□ 1.44
SRRM3-205ENST00000612155 POLA2Q14181 598 aa24.03■■□□□ 1.44
SRRM3-205ENST00000612155 CCDC57Q2TAC2 916 aa24.03■■□□□ 1.44
SRRM3-205ENST00000612155 CCDC152Q4G0S7 254 aa24.03■■□□□ 1.44
SRRM3-205ENST00000612155 BRIP1Q9BX63 1249 aa24.03■■□□□ 1.44
SRRM3-205ENST00000612155 OSBPL3Q9H4L5 887 aa24.02■■□□□ 1.44
SRRM3-205ENST00000612155 IFIT5Q13325 482 aaKnown RBP24.02■■□□□ 1.44
SRRM3-205ENST00000612155 SF3B3Q15393 1217 aaKnown RBP24.02■■□□□ 1.44
SRRM3-205ENST00000612155 PUS3Q9BZE2 481 aaKnown RBP24.02■■□□□ 1.44
SRRM3-205ENST00000612155 SPON1Q9HCB6 807 aa24.02■■□□□ 1.44
SRRM3-205ENST00000612155 PTPN12Q05209 780 aaKnown RBP24.01■■□□□ 1.43
SRRM3-205ENST00000612155 TSHZ3Q63HK5 1081 aa24.01■■□□□ 1.43
SRRM3-205ENST00000612155 CELF1Q92879 486 aaKnown RBP24.01■■□□□ 1.43
SRRM3-205ENST00000612155 LRRCC1Q9C099 1032 aa24.01■■□□□ 1.43
SRRM3-205ENST00000612155 SLKQ9H2G2 1235 aaPredicted RBP24.01■■□□□ 1.43
SRRM3-205ENST00000612155 SURF6O75683 361 aaKnown RBP24■■□□□ 1.43
SRRM3-205ENST00000612155 HSP90B1P14625 803 aaKnown RBP24■■□□□ 1.43
SRRM3-205ENST00000612155 TAF7LQ5H9L4 462 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms