RNA–Protein interactions for RNA: ENST00000612011.1

PVT1-221, Transcript of Pvt1 oncogene, humanhuman

Gene PVT1, Length 169 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-221ENST00000612011 CHMP3Q9Y3E7 222 aa12.65□□□□□ -0.38
PVT1-221ENST00000612011 PARP3Q9Y6F1 533 aa12.65□□□□□ -0.38
PVT1-221ENST00000612011 COL4A1P02462 1669 aa12.64□□□□□ -0.39
PVT1-221ENST00000612011 MMP10P09238 476 aa12.64□□□□□ -0.39
PVT1-221ENST00000612011 CTSWP56202 376 aa12.64□□□□□ -0.39
PVT1-221ENST00000612011 ST5P78524 1137 aa12.64□□□□□ -0.39
PVT1-221ENST00000612011 POLA2Q14181 598 aa12.64□□□□□ -0.39
PVT1-221ENST00000612011 LMBR1LQ6UX01 489 aa12.64□□□□□ -0.39
PVT1-221ENST00000612011 SLC16A10Q8TF71 515 aa12.64□□□□□ -0.39
PVT1-221ENST00000612011 LRRC37AA6NMS7 1700 aa12.64□□□□□ -0.39
PVT1-221ENST00000612011 KDM2BQ8NHM5 1336 aa12.63□□□□□ -0.39
PVT1-221ENST00000612011 PSDA5PKW4 1024 aaPredicted RBP12.63□□□□□ -0.39
PVT1-221ENST00000612011 PRR5LQ6MZQ0 368 aa12.63□□□□□ -0.39
PVT1-221ENST00000612011 CENPQQ7L2Z9 268 aaPredicted RBP12.63□□□□□ -0.39
PVT1-221ENST00000612011 CCDC24Q8N4L8 307 aa12.63□□□□□ -0.39
PVT1-221ENST00000612011 SSH3Q8TE77 659 aa12.63□□□□□ -0.39
PVT1-221ENST00000612011 FAM161AQ3B820 660 aa12.62□□□□□ -0.39
PVT1-221ENST00000612011 SLC10A5Q5PT55 438 aa12.62□□□□□ -0.39
PVT1-221ENST00000612011 TTLL11Q8NHH1 800 aa12.62□□□□□ -0.39
PVT1-221ENST00000612011 CCDC85AQ96PX6 553 aaPredicted RBP12.62□□□□□ -0.39
PVT1-221ENST00000612011 CSF1RP07333 972 aa12.61□□□□□ -0.39
PVT1-221ENST00000612011 CCDC152Q4G0S7 254 aa12.61□□□□□ -0.39
PVT1-221ENST00000612011 GCC1Q96CN9 775 aa12.61□□□□□ -0.39
PVT1-221ENST00000612011 SLX4Q8IY92 1834 aa12.6□□□□□ -0.39
PVT1-221ENST00000612011 RTL9Q8NET4 1388 aa12.6□□□□□ -0.39
PVT1-221ENST00000612011 ZBTB7AO95365 584 aa12.6□□□□□ -0.39
PVT1-221ENST00000612011 RFX5P48382 616 aaPredicted RBP12.6□□□□□ -0.39
PVT1-221ENST00000612011 CCDC57Q2TAC2 916 aa12.6□□□□□ -0.39
PVT1-221ENST00000612011 C3orf67Q6ZVT6 689 aa12.6□□□□□ -0.39
PVT1-221ENST00000612011 NLRP3Q96P20 1036 aa12.6□□□□□ -0.39
PVT1-221ENST00000612011 MTFR1LQ9H019 292 aa12.6□□□□□ -0.39
PVT1-221ENST00000612011 GREM2Q9H772 168 aa12.6□□□□□ -0.39
PVT1-221ENST00000612011 PA2G4Q9UQ80 394 aaKnown RBP12.6□□□□□ -0.39
PVT1-221ENST00000612011 EXOC6BQ9Y2D4 811 aa12.6□□□□□ -0.39
PVT1-221ENST00000612011 ANKRD18BA2A2Z9 1011 aa12.59□□□□□ -0.39
PVT1-221ENST00000612011 SURF6O75683 361 aaKnown RBP12.59□□□□□ -0.39
PVT1-221ENST00000612011 ITGA6P23229 1130 aa12.59□□□□□ -0.39
PVT1-221ENST00000612011 IFIT5Q13325 482 aaKnown RBP12.59□□□□□ -0.39
PVT1-221ENST00000612011 SF3B3Q15393 1217 aaKnown RBP12.59□□□□□ -0.39
PVT1-221ENST00000612011 TAF7LQ5H9L4 462 aa12.59□□□□□ -0.39
PVT1-221ENST00000612011 SMC5Q8IY18 1101 aa12.59□□□□□ -0.39
PVT1-221ENST00000612011 KLHDC4Q8TBB5 520 aa12.59□□□□□ -0.39
PVT1-221ENST00000612011 DCTPP1Q9H773 170 aa12.59□□□□□ -0.39
PVT1-221ENST00000612011 C10orf71Q711Q0 1435 aa12.59□□□□□ -0.39
PVT1-221ENST00000612011 MYH7P12883 1935 aa12.58□□□□□ -0.39
PVT1-221ENST00000612011 ARFGEF1Q9Y6D6 1849 aa12.58□□□□□ -0.4
PVT1-221ENST00000612011 APBB1O00213 710 aa12.58□□□□□ -0.4
PVT1-221ENST00000612011 PTPN12Q05209 780 aaKnown RBP12.58□□□□□ -0.4
PVT1-221ENST00000612011 OS9Q13438 667 aaPredicted RBP12.58□□□□□ -0.4
PVT1-221ENST00000612011 HSP90AB4PQ58FF6 505 aa12.58□□□□□ -0.4
PVT1-221ENST00000612011 ZNF594Q96JF6 807 aaPredicted RBP12.58□□□□□ -0.4
PVT1-221ENST00000612011 SIL1Q9H173 461 aa12.58□□□□□ -0.4
PVT1-221ENST00000612011 COPRSQ9NQ92 184 aa12.58□□□□□ -0.4
PVT1-221ENST00000612011 ATF5Q9Y2D1 282 aaPredicted RBP12.58□□□□□ -0.4
PVT1-221ENST00000612011 CCDC88AQ3V6T2 1871 aa12.57□□□□□ -0.4
PVT1-221ENST00000612011 LTBP1Q14766 1721 aa12.57□□□□□ -0.4
PVT1-221ENST00000612011 POLD1P28340 1107 aa12.57□□□□□ -0.4
PVT1-221ENST00000612011 G3BP1Q13283 466 aaKnown RBP eCLIP12.57□□□□□ -0.4
PVT1-221ENST00000612011 RPGRQ92834 1020 aaKnown RBP12.57□□□□□ -0.4
PVT1-221ENST00000612011 SEC31BQ9NQW1 1179 aa12.57□□□□□ -0.4
PVT1-221ENST00000612011 ZBTB47Q9UFB7 747 aaPredicted RBP12.57□□□□□ -0.4
PVT1-221ENST00000612011 NOP58Q9Y2X3 529 aaKnown RBP12.57□□□□□ -0.4
PVT1-221ENST00000612011 RAB11FIP3O75154 756 aa12.56□□□□□ -0.4
PVT1-221ENST00000612011 ERC1Q8IUD2 1116 aa12.56□□□□□ -0.4
PVT1-221ENST00000612011 CDC5LQ99459 802 aaKnown RBP12.56□□□□□ -0.4
PVT1-221ENST00000612011 BRIP1Q9BX63 1249 aa12.56□□□□□ -0.4
PVT1-221ENST00000612011 PDZRN3Q9UPQ7 1066 aa12.56□□□□□ -0.4
PVT1-221ENST00000612011 MYO5AQ9Y4I1 1855 aaKnown RBP12.56□□□□□ -0.4
PVT1-221ENST00000612011 CHD4Q14839 1912 aa12.55□□□□□ -0.4
PVT1-221ENST00000612011 PDE6BP35913 854 aa12.55□□□□□ -0.4
PVT1-221ENST00000612011 IGHMBP2P38935 993 aaKnown RBP12.55□□□□□ -0.4
PVT1-221ENST00000612011 CRY2Q49AN0 593 aa12.55□□□□□ -0.4
PVT1-221ENST00000612011 ANKRD45Q5TZF3 282 aa12.55□□□□□ -0.4
PVT1-221ENST00000612011 DDX46Q7L014 1031 aaKnown RBP12.55□□□□□ -0.4
PVT1-221ENST00000612011 ANKRD18AQ8IVF6 992 aa12.55□□□□□ -0.4
PVT1-221ENST00000612011 LRRCC1Q9C099 1032 aa12.55□□□□□ -0.4
PVT1-221ENST00000612011 AKAP11Q9UKA4 1901 aa12.54□□□□□ -0.4
PVT1-221ENST00000612011 EYA2O00167 538 aa12.54□□□□□ -0.4
PVT1-221ENST00000612011 SMARCA5O60264 1052 aaPredicted RBP12.54□□□□□ -0.4
PVT1-221ENST00000612011 CIAO1O76071 339 aa12.54□□□□□ -0.4
PVT1-221ENST00000612011 NUCB1Q02818 461 aa12.54□□□□□ -0.4
PVT1-221ENST00000612011 LRRC24Q50LG9 513 aa12.54□□□□□ -0.4
PVT1-221ENST00000612011 RHPN1Q8TCX5 695 aa12.54□□□□□ -0.4
PVT1-221ENST00000612011 KIF1BPQ96EK5 621 aa12.54□□□□□ -0.4
PVT1-221ENST00000612011 RBM17Q96I25 401 aaKnown RBP12.54□□□□□ -0.4
PVT1-221ENST00000612011 MPHOSPH8Q99549 860 aa12.54□□□□□ -0.4
PVT1-221ENST00000612011 PUS3Q9BZE2 481 aaKnown RBP12.54□□□□□ -0.4
PVT1-221ENST00000612011 LNPKQ9C0E8 428 aa12.54□□□□□ -0.4
PVT1-221ENST00000612011 BCL11AQ9H165 835 aa12.54□□□□□ -0.4
PVT1-221ENST00000612011 CNNM1Q9NRU3 951 aa12.54□□□□□ -0.4
PVT1-221ENST00000612011 FBXO3Q9UK99 471 aa12.54□□□□□ -0.4
PVT1-221ENST00000612011 ZNF609O15014 1411 aa12.54□□□□□ -0.4
PVT1-221ENST00000612011 KLRG2A4D1S0 409 aaPredicted RBP12.53□□□□□ -0.4
PVT1-221ENST00000612011 GRAPQ13588 217 aa12.53□□□□□ -0.4
PVT1-221ENST00000612011 LDHAL6AQ6ZMR3 332 aa12.53□□□□□ -0.4
PVT1-221ENST00000612011 ATG9AQ7Z3C6 839 aa12.53□□□□□ -0.4
PVT1-221ENST00000612011 CHD1LQ86WJ1 897 aa12.53□□□□□ -0.4
PVT1-221ENST00000612011 C2CD5Q86YS7 1000 aa12.53□□□□□ -0.4
PVT1-221ENST00000612011 GRAPLQ8TC17 118 aaPredicted RBP12.53□□□□□ -0.4
PVT1-221ENST00000612011 CELF1Q92879 486 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms