RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 ZNRF3Q9ULT6 936 aa17.42■□□□□ 0.38
HMGB1P24-201ENST00000611897 CXCL9Q07325 125 aa17.41■□□□□ 0.38
HMGB1P24-201ENST00000611897 USP50Q70EL3 339 aaPredicted RBP17.41■□□□□ 0.38
HMGB1P24-201ENST00000611897 ADARB2Q9NS39 739 aaKnown RBP17.41■□□□□ 0.38
HMGB1P24-201ENST00000611897 GPRC5DQ9NZD1 345 aa17.41■□□□□ 0.38
HMGB1P24-201ENST00000611897 DDX60Q8IY21 1712 aaKnown RBP17.41■□□□□ 0.38
HMGB1P24-201ENST00000611897 ATP5J2-PTCD1G3V325 749 aa17.4■□□□□ 0.38
HMGB1P24-201ENST00000611897 BBOX1O75936 387 aa17.4■□□□□ 0.38
HMGB1P24-201ENST00000611897 GRAPQ13588 217 aa17.4■□□□□ 0.38
HMGB1P24-201ENST00000611897 CIAPIN1Q6FI81 312 aa17.4■□□□□ 0.38
HMGB1P24-201ENST00000611897 GRAPLQ8TC17 118 aaPredicted RBP17.4■□□□□ 0.38
HMGB1P24-201ENST00000611897 RUNDC1Q96C34 613 aa17.4■□□□□ 0.38
HMGB1P24-201ENST00000611897 ZNF408Q9H9D4 720 aa17.4■□□□□ 0.38
HMGB1P24-201ENST00000611897 PRDM10Q9NQV6 1147 aa17.4■□□□□ 0.38
HMGB1P24-201ENST00000611897 WBP1LQ9NX94 342 aa17.4■□□□□ 0.38
HMGB1P24-201ENST00000611897 CHL1O00533 1208 aa17.39■□□□□ 0.37
HMGB1P24-201ENST00000611897 CYP4F22Q6NT55 531 aa17.39■□□□□ 0.37
HMGB1P24-201ENST00000611897 SP8Q8IXZ3 490 aa17.39■□□□□ 0.37
HMGB1P24-201ENST00000611897 CAPNS2Q96L46 248 aa17.39■□□□□ 0.37
HMGB1P24-201ENST00000611897 TRIM35Q9UPQ4 493 aa17.39■□□□□ 0.37
HMGB1P24-201ENST00000611897 KIAA2012Q0VF49 1180 aa17.38■□□□□ 0.37
HMGB1P24-201ENST00000611897 FAM89AQ96GI7 184 aa17.38■□□□□ 0.37
HMGB1P24-201ENST00000611897 RTFDC1Q9BY42 306 aaPredicted RBP17.38■□□□□ 0.37
HMGB1P24-201ENST00000611897 GLIS2Q9BZE0 524 aaPredicted RBP17.38■□□□□ 0.37
HMGB1P24-201ENST00000611897 DUOX1Q9NRD9 1551 aa17.37■□□□□ 0.37
HMGB1P24-201ENST00000611897 HSPA8P11142 646 aaKnown RBP17.37■□□□□ 0.37
HMGB1P24-201ENST00000611897 ECE1P42892 770 aa17.37■□□□□ 0.37
HMGB1P24-201ENST00000611897 MAP2K1Q02750 393 aaPredicted RBP17.37■□□□□ 0.37
HMGB1P24-201ENST00000611897 PLBD2Q8NHP8 589 aa17.37■□□□□ 0.37
HMGB1P24-201ENST00000611897 BEGAINQ9BUH8 593 aa17.37■□□□□ 0.37
HMGB1P24-201ENST00000611897 LRRC37AA6NMS7 1700 aa17.37■□□□□ 0.37
HMGB1P24-201ENST00000611897 SHTN1A0MZ66 631 aa17.36■□□□□ 0.37
HMGB1P24-201ENST00000611897 CELF2O95319 508 aaKnown RBP17.36■□□□□ 0.37
HMGB1P24-201ENST00000611897 TNIP1Q15025 636 aa17.36■□□□□ 0.37
HMGB1P24-201ENST00000611897 DUSP27Q5VZP5 1158 aa17.36■□□□□ 0.37
HMGB1P24-201ENST00000611897 CST9Q5W186 159 aa17.36■□□□□ 0.37
HMGB1P24-201ENST00000611897 ANKRD13DQ6ZTN6 518 aa17.36■□□□□ 0.37
HMGB1P24-201ENST00000611897 VPS33BQ9H267 617 aa17.36■□□□□ 0.37
HMGB1P24-201ENST00000611897 DBNDD1Q9H9R9 158 aa17.36■□□□□ 0.37
HMGB1P24-201ENST00000611897 DBF4Q9UBU7 674 aaPredicted RBP17.36■□□□□ 0.37
HMGB1P24-201ENST00000611897 ADAMTS8Q9UP79 889 aa17.36■□□□□ 0.37
HMGB1P24-201ENST00000611897 C6orf229H3BNL8 230 aa17.35■□□□□ 0.37
HMGB1P24-201ENST00000611897 RIMBP2O15034 1052 aa17.35■□□□□ 0.37
HMGB1P24-201ENST00000611897 TRPM4Q8TD43 1214 aa17.35■□□□□ 0.37
HMGB1P24-201ENST00000611897 CELF1Q92879 486 aaKnown RBP17.35■□□□□ 0.37
HMGB1P24-201ENST00000611897 GPR101Q96P66 508 aaPredicted RBP17.35■□□□□ 0.37
HMGB1P24-201ENST00000611897 TSKSQ9UJT2 592 aa17.35■□□□□ 0.37
HMGB1P24-201ENST00000611897 NSFL1CQ9UNZ2 370 aaKnown RBP17.35■□□□□ 0.37
HMGB1P24-201ENST00000611897 THSD7BQ9C0I4 1608 aa17.35■□□□□ 0.37
HMGB1P24-201ENST00000611897 COL4A1P02462 1669 aa17.35■□□□□ 0.37
HMGB1P24-201ENST00000611897 YDJCA8MPS7 323 aa17.34■□□□□ 0.37
HMGB1P24-201ENST00000611897 AOC2O75106 756 aa17.34■□□□□ 0.37
HMGB1P24-201ENST00000611897 MBIPQ9NS73 344 aa17.34■□□□□ 0.37
HMGB1P24-201ENST00000611897 ZBTB12Q9Y330 459 aaPredicted RBP17.34■□□□□ 0.37
HMGB1P24-201ENST00000611897 TLL2Q9Y6L7 1015 aa17.34■□□□□ 0.37
HMGB1P24-201ENST00000611897 ELL2O00472 640 aaPredicted RBP17.33■□□□□ 0.36
HMGB1P24-201ENST00000611897 HOXB7P09629 217 aa17.33■□□□□ 0.36
HMGB1P24-201ENST00000611897 GOLGA2Q08379 1002 aa17.33■□□□□ 0.36
HMGB1P24-201ENST00000611897 WASHC4Q2M389 1173 aa17.33■□□□□ 0.36
HMGB1P24-201ENST00000611897 TMC4Q7Z404 712 aa17.33■□□□□ 0.36
HMGB1P24-201ENST00000611897 RIC3Q7Z5B4 369 aa17.33■□□□□ 0.36
HMGB1P24-201ENST00000611897 MICALL2Q8IY33 904 aa17.33■□□□□ 0.36
HMGB1P24-201ENST00000611897 ISCA1Q9BUE6 129 aa17.33■□□□□ 0.36
HMGB1P24-201ENST00000611897 HYPKQ9NX55 129 aa17.33■□□□□ 0.36
HMGB1P24-201ENST00000611897 CNOT7Q9UIV1 285 aaKnown RBP17.33■□□□□ 0.36
HMGB1P24-201ENST00000611897 CDHR2Q9BYE9 1310 aa17.32■□□□□ 0.36
HMGB1P24-201ENST00000611897 H7C1D1 291 aa17.32■□□□□ 0.36
HMGB1P24-201ENST00000611897 IRS4O14654 1257 aaPredicted RBP17.32■□□□□ 0.36
HMGB1P24-201ENST00000611897 CFAP44Q96MT7 982 aa17.32■□□□□ 0.36
HMGB1P24-201ENST00000611897 PSMD14O00487 310 aa17.31■□□□□ 0.36
HMGB1P24-201ENST00000611897 HIRAP54198 1017 aaPredicted RBP17.31■□□□□ 0.36
HMGB1P24-201ENST00000611897 GPSM2P81274 684 aa17.31■□□□□ 0.36
HMGB1P24-201ENST00000611897 DOK7Q18PE1 504 aa17.31■□□□□ 0.36
HMGB1P24-201ENST00000611897 SF3B3Q15393 1217 aaKnown RBP17.3■□□□□ 0.36
HMGB1P24-201ENST00000611897 TBC1D10BQ4KMP7 808 aaPredicted RBP17.3■□□□□ 0.36
HMGB1P24-201ENST00000611897 RBM26Q5T8P6 1007 aaKnown RBP17.3■□□□□ 0.36
HMGB1P24-201ENST00000611897 SAMD7Q7Z3H4 446 aa17.3■□□□□ 0.36
HMGB1P24-201ENST00000611897 SAPCD2Q86UD0 394 aa17.3■□□□□ 0.36
HMGB1P24-201ENST00000611897 CCDC85AQ96PX6 553 aaPredicted RBP17.3■□□□□ 0.36
HMGB1P24-201ENST00000611897 MYD88Q99836 296 aa17.3■□□□□ 0.36
HMGB1P24-201ENST00000611897 PHAXQ9H814 394 aaKnown RBP17.3■□□□□ 0.36
HMGB1P24-201ENST00000611897 G3V3G9 751 aa17.29■□□□□ 0.36
HMGB1P24-201ENST00000611897 APAF1O14727 1248 aa17.29■□□□□ 0.36
HMGB1P24-201ENST00000611897 ECE2O60344 883 aa17.29■□□□□ 0.36
HMGB1P24-201ENST00000611897 DCAF8Q5TAQ9 597 aa17.29■□□□□ 0.36
HMGB1P24-201ENST00000611897 DLK2Q6UY11 383 aa17.29■□□□□ 0.36
HMGB1P24-201ENST00000611897 CDC37L1Q7L3B6 337 aa17.29■□□□□ 0.36
HMGB1P24-201ENST00000611897 USP48Q86UV5 1035 aa17.29■□□□□ 0.36
HMGB1P24-201ENST00000611897 JARID2Q92833 1246 aaPredicted RBP17.29■□□□□ 0.36
HMGB1P24-201ENST00000611897 POLLQ9UGP5 575 aa17.29■□□□□ 0.36
HMGB1P24-201ENST00000611897 POLR2AP24928 1970 aaKnown RBP17.29■□□□□ 0.36
HMGB1P24-201ENST00000611897 ABHD8Q96I13 439 aa17.28■□□□□ 0.36
HMGB1P24-201ENST00000611897 EYA3Q99504 573 aa17.28■□□□□ 0.36
HMGB1P24-201ENST00000611897 SEC31BQ9NQW1 1179 aa17.28■□□□□ 0.36
HMGB1P24-201ENST00000611897 SCN9AQ15858 1988 aa17.28■□□□□ 0.36
HMGB1P24-201ENST00000611897 UFL1O94874 794 aa17.27■□□□□ 0.36
HMGB1P24-201ENST00000611897 RPS8P62241 208 aaKnown RBP17.27■□□□□ 0.36
HMGB1P24-201ENST00000611897 ZC3H15Q8WU90 426 aaKnown RBP17.27■□□□□ 0.36
HMGB1P24-201ENST00000611897 KCNQ5Q9NR82 932 aa17.27■□□□□ 0.36
HMGB1P24-201ENST00000611897 ANKIB1Q9P2G1 1089 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms