RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 SRGAP3O43295 1099 aa27.49■■□□□ 1.99
UBE3C-209ENST00000611269 SERPINB2P05120 415 aa27.48■■□□□ 1.99
UBE3C-209ENST00000611269 R3HDM1Q15032 1099 aaKnown RBP27.48■■□□□ 1.99
UBE3C-209ENST00000611269 LMBR1LQ6UX01 489 aa27.48■■□□□ 1.99
UBE3C-209ENST00000611269 ABCC12Q96J65 1359 aa27.47■■□□□ 1.99
UBE3C-209ENST00000611269 NPHP1O15259 732 aa27.47■■□□□ 1.99
UBE3C-209ENST00000611269 PDE8AO60658 829 aa27.47■■□□□ 1.99
UBE3C-209ENST00000611269 HMMRO75330 724 aa27.47■■□□□ 1.99
UBE3C-209ENST00000611269 MMP10P09238 476 aa27.47■■□□□ 1.99
UBE3C-209ENST00000611269 CNBD1Q8NA66 436 aa27.47■■□□□ 1.99
UBE3C-209ENST00000611269 CCDC24Q8N4L8 307 aa27.47■■□□□ 1.99
UBE3C-209ENST00000611269 SSH3Q8TE77 659 aa27.46■■□□□ 1.99
UBE3C-209ENST00000611269 CASZ1Q86V15 1759 aa27.46■■□□□ 1.99
UBE3C-209ENST00000611269 CTSWP56202 376 aa27.45■■□□□ 1.99
UBE3C-209ENST00000611269 POLA2Q14181 598 aa27.45■■□□□ 1.99
UBE3C-209ENST00000611269 PRR5LQ6MZQ0 368 aa27.45■■□□□ 1.99
UBE3C-209ENST00000611269 CHMP3Q9Y3E7 222 aa27.45■■□□□ 1.99
UBE3C-209ENST00000611269 SLC16A10Q8TF71 515 aa27.44■■□□□ 1.98
UBE3C-209ENST00000611269 HSP90B1P14625 803 aaKnown RBP27.44■■□□□ 1.98
UBE3C-209ENST00000611269 SLC10A5Q5PT55 438 aa27.44■■□□□ 1.98
UBE3C-209ENST00000611269 CCDC85AQ96PX6 553 aaPredicted RBP27.44■■□□□ 1.98
UBE3C-209ENST00000611269 NRXN2Q9P2S2 1712 aa27.43■■□□□ 1.98
UBE3C-209ENST00000611269 CSF1RP07333 972 aa27.43■■□□□ 1.98
UBE3C-209ENST00000611269 BMP2KLQ5H9B9 411 aa27.43■■□□□ 1.98
UBE3C-209ENST00000611269 TTLL11Q8NHH1 800 aa27.43■■□□□ 1.98
UBE3C-209ENST00000611269 PARP3Q9Y6F1 533 aa27.43■■□□□ 1.98
UBE3C-209ENST00000611269 UPF2Q9HAU5 1272 aaKnown RBP27.42■■□□□ 1.98
UBE3C-209ENST00000611269 PSDA5PKW4 1024 aaPredicted RBP27.42■■□□□ 1.98
UBE3C-209ENST00000611269 C3orf67Q6ZVT6 689 aa27.41■■□□□ 1.98
UBE3C-209ENST00000611269 TNRC6CQ9HCJ0 1690 aaKnown RBP27.41■■□□□ 1.98
UBE3C-209ENST00000611269 ST5P78524 1137 aa27.4■■□□□ 1.98
UBE3C-209ENST00000611269 GREM2Q9H772 168 aa27.4■■□□□ 1.98
UBE3C-209ENST00000611269 ZBTB7AO95365 584 aa27.39■■□□□ 1.98
UBE3C-209ENST00000611269 RFX5P48382 616 aaPredicted RBP27.38■■□□□ 1.97
UBE3C-209ENST00000611269 KLHDC4Q8TBB5 520 aa27.38■■□□□ 1.97
UBE3C-209ENST00000611269 PA2G4Q9UQ80 394 aaKnown RBP27.38■■□□□ 1.97
UBE3C-209ENST00000611269 NLRP3Q96P20 1036 aa27.38■■□□□ 1.97
UBE3C-209ENST00000611269 EXOC6BQ9Y2D4 811 aa27.38■■□□□ 1.97
UBE3C-209ENST00000611269 TBC1D32Q96NH3 1257 aa27.37■■□□□ 1.97
UBE3C-209ENST00000611269 CCDC57Q2TAC2 916 aa27.36■■□□□ 1.97
UBE3C-209ENST00000611269 CCDC152Q4G0S7 254 aa27.36■■□□□ 1.97
UBE3C-209ENST00000611269 RIC1Q4ADV7 1423 aa27.36■■□□□ 1.97
UBE3C-209ENST00000611269 SURF6O75683 361 aaKnown RBP27.36■■□□□ 1.97
UBE3C-209ENST00000611269 ITGA6P23229 1130 aa27.36■■□□□ 1.97
UBE3C-209ENST00000611269 PTPN12Q05209 780 aaKnown RBP27.36■■□□□ 1.97
UBE3C-209ENST00000611269 IFIT5Q13325 482 aaKnown RBP27.36■■□□□ 1.97
UBE3C-209ENST00000611269 SF3B3Q15393 1217 aaKnown RBP27.36■■□□□ 1.97
UBE3C-209ENST00000611269 PLEKHM2Q8IWE5 1019 aa27.35■■□□□ 1.97
UBE3C-209ENST00000611269 ANKRD31Q8N7Z5 1873 aa27.35■■□□□ 1.97
UBE3C-209ENST00000611269 MTFR1LQ9H019 292 aa27.34■■□□□ 1.97
UBE3C-209ENST00000611269 COPRSQ9NQ92 184 aa27.34■■□□□ 1.97
UBE3C-209ENST00000611269 ZNF594Q96JF6 807 aaPredicted RBP27.34■■□□□ 1.97
UBE3C-209ENST00000611269 SIL1Q9H173 461 aa27.34■■□□□ 1.97
UBE3C-209ENST00000611269 ATF5Q9Y2D1 282 aaPredicted RBP27.33■■□□□ 1.97
UBE3C-209ENST00000611269 RTL9Q8NET4 1388 aa27.33■■□□□ 1.97
UBE3C-209ENST00000611269 ANKRD18BA2A2Z9 1011 aa27.32■■□□□ 1.96
UBE3C-209ENST00000611269 APBB1O00213 710 aa27.32■■□□□ 1.96
UBE3C-209ENST00000611269 SEC31BQ9NQW1 1179 aa27.32■■□□□ 1.96
UBE3C-209ENST00000611269 TAF1P21675 1872 aa27.31■■□□□ 1.96
UBE3C-209ENST00000611269 TAF7LQ5H9L4 462 aa27.3■■□□□ 1.96
UBE3C-209ENST00000611269 BRIP1Q9BX63 1249 aa27.3■■□□□ 1.96
UBE3C-209ENST00000611269 DAXXQ9UER7 740 aaPredicted RBP27.3■■□□□ 1.96
UBE3C-209ENST00000611269 COL4A1P02462 1669 aa27.29■■□□□ 1.96
UBE3C-209ENST00000611269 OS9Q13438 667 aaPredicted RBP27.29■■□□□ 1.96
UBE3C-209ENST00000611269 G3BP1Q13283 466 aaKnown RBP eCLIP27.28■■□□□ 1.96
UBE3C-209ENST00000611269 CRY2Q49AN0 593 aa27.28■■□□□ 1.96
UBE3C-209ENST00000611269 HSP90AB4PQ58FF6 505 aa27.28■■□□□ 1.96
UBE3C-209ENST00000611269 C16orf71Q8IYS4 520 aaPredicted RBP27.28■■□□□ 1.96
UBE3C-209ENST00000611269 SPEF2Q9C093 1822 aa27.28■■□□□ 1.96
UBE3C-209ENST00000611269 KLRG2A4D1S0 409 aaPredicted RBP27.27■■□□□ 1.96
UBE3C-209ENST00000611269 RAB11FIP3O75154 756 aa27.26■■□□□ 1.95
UBE3C-209ENST00000611269 POLD1P28340 1107 aa27.26■■□□□ 1.95
UBE3C-209ENST00000611269 LRRC24Q50LG9 513 aa27.26■■□□□ 1.95
UBE3C-209ENST00000611269 TTC22Q5TAA0 569 aa27.26■■□□□ 1.95
UBE3C-209ENST00000611269 PUS3Q9BZE2 481 aaKnown RBP27.26■■□□□ 1.95
UBE3C-209ENST00000611269 MFAP1P55081 439 aaKnown RBP27.25■■□□□ 1.95
UBE3C-209ENST00000611269 DDX46Q7L014 1031 aaKnown RBP27.25■■□□□ 1.95
UBE3C-209ENST00000611269 RPGRQ92834 1020 aaKnown RBP27.25■■□□□ 1.95
UBE3C-209ENST00000611269 CDC5LQ99459 802 aaKnown RBP27.25■■□□□ 1.95
UBE3C-209ENST00000611269 C22orf23Q9BZE7 217 aa27.25■■□□□ 1.95
UBE3C-209ENST00000611269 LRP5O75197 1615 aa27.25■■□□□ 1.95
UBE3C-209ENST00000611269 EYA2O00167 538 aa27.25■■□□□ 1.95
UBE3C-209ENST00000611269 SMARCA5O60264 1052 aaPredicted RBP27.25■■□□□ 1.95
UBE3C-209ENST00000611269 PDE6BP35913 854 aa27.25■■□□□ 1.95
UBE3C-209ENST00000611269 LDHAL6AQ6ZMR3 332 aa27.25■■□□□ 1.95
UBE3C-209ENST00000611269 ATG9AQ7Z3C6 839 aa27.25■■□□□ 1.95
UBE3C-209ENST00000611269 LRRCC1Q9C099 1032 aa27.25■■□□□ 1.95
UBE3C-209ENST00000611269 BCL11AQ9H165 835 aa27.25■■□□□ 1.95
UBE3C-209ENST00000611269 GSPT1P15170 499 aaKnown RBP27.24■■□□□ 1.95
UBE3C-209ENST00000611269 RHPN1Q8TCX5 695 aa27.24■■□□□ 1.95
UBE3C-209ENST00000611269 COL11A2P13942 1736 aaPredicted RBP27.24■■□□□ 1.95
UBE3C-209ENST00000611269 CIAO1O76071 339 aa27.23■■□□□ 1.95
UBE3C-209ENST00000611269 SASH1O94885 1247 aa27.23■■□□□ 1.95
UBE3C-209ENST00000611269 ERC1Q8IUD2 1116 aa27.23■■□□□ 1.95
UBE3C-209ENST00000611269 CELF1Q92879 486 aaKnown RBP27.23■■□□□ 1.95
UBE3C-209ENST00000611269 KIF1BPQ96EK5 621 aa27.23■■□□□ 1.95
UBE3C-209ENST00000611269 OSBPL3Q9H4L5 887 aa27.23■■□□□ 1.95
UBE3C-209ENST00000611269 C10orf71Q711Q0 1435 aa27.23■■□□□ 1.95
UBE3C-209ENST00000611269 IGHMBP2P38935 993 aaKnown RBP27.23■■□□□ 1.95
UBE3C-209ENST00000611269 FBXO3Q9UK99 471 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms