RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 EPHX2P34913 555 aa22.37■■□□□ 1.17
PRKN-208ENST00000610470 SF3B3Q15393 1217 aaKnown RBP22.37■■□□□ 1.17
PRKN-208ENST00000610470 MPNDQ8N594 471 aa22.37■■□□□ 1.17
PRKN-208ENST00000610470 TSR2Q969E8 191 aaKnown RBP22.37■■□□□ 1.17
PRKN-208ENST00000610470 GJA3Q9Y6H8 435 aa22.37■■□□□ 1.17
PRKN-208ENST00000610470 IRS4O14654 1257 aaPredicted RBP22.36■■□□□ 1.17
PRKN-208ENST00000610470 EAPPQ56P03 285 aaPredicted RBP22.36■■□□□ 1.17
PRKN-208ENST00000610470 PNMA8AQ86V59 439 aaPredicted RBP22.36■■□□□ 1.17
PRKN-208ENST00000610470 TSPYL6Q8N831 410 aa22.36■■□□□ 1.17
PRKN-208ENST00000610470 ZBTB38Q8NAP3 1195 aaPredicted RBP22.36■■□□□ 1.17
PRKN-208ENST00000610470 MYD88Q99836 296 aa22.36■■□□□ 1.17
PRKN-208ENST00000610470 DDX60Q8IY21 1712 aaKnown RBP22.36■■□□□ 1.17
PRKN-208ENST00000610470 AOC3Q16853 763 aa22.35■■□□□ 1.17
PRKN-208ENST00000610470 RTL5Q5HYW3 569 aaPredicted RBP22.35■■□□□ 1.17
PRKN-208ENST00000610470 CCDC191Q8NCU4 936 aa22.35■■□□□ 1.17
PRKN-208ENST00000610470 STK31Q9BXU1 1019 aa22.35■■□□□ 1.17
PRKN-208ENST00000610470 LMOD1P29536 600 aaPredicted RBP22.34■■□□□ 1.17
PRKN-208ENST00000610470 CLEC11AQ9Y240 323 aa22.34■■□□□ 1.17
PRKN-208ENST00000610470 TWISTNBQ3B726 338 aaPredicted RBP22.33■■□□□ 1.17
PRKN-208ENST00000610470 JMYQ8N9B5 988 aa22.33■■□□□ 1.17
PRKN-208ENST00000610470 METTL22Q9BUU2 404 aaPredicted RBP22.33■■□□□ 1.17
PRKN-208ENST00000610470 CWC25Q9NXE8 425 aaPredicted RBP22.33■■□□□ 1.17
PRKN-208ENST00000610470 ZNRF3Q9ULT6 936 aa22.32■■□□□ 1.16
PRKN-208ENST00000610470 PCCAP05165 728 aaPredicted RBP22.31■■□□□ 1.16
PRKN-208ENST00000610470 KIAA2012Q0VF49 1180 aa22.31■■□□□ 1.16
PRKN-208ENST00000610470 CELF1Q92879 486 aaKnown RBP22.31■■□□□ 1.16
PRKN-208ENST00000610470 CREBZFQ9NS37 354 aa22.31■■□□□ 1.16
PRKN-208ENST00000610470 MAP3K2Q9Y2U5 619 aa22.31■■□□□ 1.16
PRKN-208ENST00000610470 KSR2Q6VAB6 950 aa22.3■■□□□ 1.16
PRKN-208ENST00000610470 WDR63Q8IWG1 891 aa22.3■■□□□ 1.16
PRKN-208ENST00000610470 PASKQ96RG2 1323 aa22.3■■□□□ 1.16
PRKN-208ENST00000610470 TAF1P21675 1872 aa22.29■■□□□ 1.16
PRKN-208ENST00000610470 SCNN1DP51172 638 aa22.29■■□□□ 1.16
PRKN-208ENST00000610470 LRRC37AA6NMS7 1700 aa22.28■■□□□ 1.16
PRKN-208ENST00000610470 ADAMTSL1Q8N6G6 1762 aa22.28■■□□□ 1.16
PRKN-208ENST00000610470 PI4KAP2A4QPH2 592 aa22.28■■□□□ 1.16
PRKN-208ENST00000610470 RPS8P62241 208 aaKnown RBP22.28■■□□□ 1.16
PRKN-208ENST00000610470 NEXNQ0ZGT2 675 aa22.28■■□□□ 1.16
PRKN-208ENST00000610470 PI4KAP1Q8N8J0 262 aa22.28■■□□□ 1.16
PRKN-208ENST00000610470 NSFL1CQ9UNZ2 370 aaKnown RBP22.28■■□□□ 1.16
PRKN-208ENST00000610470 SALL2Q9Y467 1007 aaPredicted RBP22.28■■□□□ 1.16
PRKN-208ENST00000610470 FANCIQ9NVI1 1328 aa22.28■■□□□ 1.16
PRKN-208ENST00000610470 PDE8AO60658 829 aa22.27■■□□□ 1.16
PRKN-208ENST00000610470 ITGBL1O95965 494 aaPredicted RBP22.27■■□□□ 1.16
PRKN-208ENST00000610470 SLC4A2P04920 1241 aa22.27■■□□□ 1.16
PRKN-208ENST00000610470 CXCL9Q07325 125 aa22.27■■□□□ 1.16
PRKN-208ENST00000610470 CCDC152Q4G0S7 254 aa22.27■■□□□ 1.16
PRKN-208ENST00000610470 EPS15P42566 896 aa22.26■■□□□ 1.15
PRKN-208ENST00000610470 TNIP1Q15025 636 aa22.26■■□□□ 1.15
PRKN-208ENST00000610470 CIAPIN1Q6FI81 312 aa22.26■■□□□ 1.15
PRKN-208ENST00000610470 USP50Q70EL3 339 aaPredicted RBP22.26■■□□□ 1.15
PRKN-208ENST00000610470 CNTROBQ8N137 903 aa22.26■■□□□ 1.15
PRKN-208ENST00000610470 DUOX1Q9NRD9 1551 aa22.25■■□□□ 1.15
PRKN-208ENST00000610470 WASHC4Q2M389 1173 aa22.25■■□□□ 1.15
PRKN-208ENST00000610470 MAP1SQ66K74 1059 aaPredicted RBP22.25■■□□□ 1.15
PRKN-208ENST00000610470 LTBP1Q14766 1721 aa22.25■■□□□ 1.15
PRKN-208ENST00000610470 CDHR2Q9BYE9 1310 aa22.25■■□□□ 1.15
PRKN-208ENST00000610470 C6orf229H3BNL8 230 aa22.24■■□□□ 1.15
PRKN-208ENST00000610470 IGKV5-2P06315 115 aa22.24■■□□□ 1.15
PRKN-208ENST00000610470 GPSM2P81274 684 aa22.24■■□□□ 1.15
PRKN-208ENST00000610470 FAM9BQ8IZU0 186 aa22.24■■□□□ 1.15
PRKN-208ENST00000610470 JARID2Q92833 1246 aaPredicted RBP22.24■■□□□ 1.15
PRKN-208ENST00000610470 EYA3Q99504 573 aa22.24■■□□□ 1.15
PRKN-208ENST00000610470 SEC31BQ9NQW1 1179 aa22.24■■□□□ 1.15
PRKN-208ENST00000610470 GPRC5DQ9NZD1 345 aa22.24■■□□□ 1.15
PRKN-208ENST00000610470 TMEM88BA6NKF7 163 aa22.23■■□□□ 1.15
PRKN-208ENST00000610470 RAD17O75943 681 aa22.23■■□□□ 1.15
PRKN-208ENST00000610470 G2E3Q7L622 706 aa22.23■■□□□ 1.15
PRKN-208ENST00000610470 ADARB2Q9NS39 739 aaKnown RBP22.23■■□□□ 1.15
PRKN-208ENST00000610470 GMPSP49915 693 aaPredicted RBP22.22■■□□□ 1.15
PRKN-208ENST00000610470 FLIIQ13045 1269 aa22.22■■□□□ 1.15
PRKN-208ENST00000610470 BCL2L13Q9BXK5 485 aa22.22■■□□□ 1.15
PRKN-208ENST00000610470 POLLQ9UGP5 575 aa22.22■■□□□ 1.15
PRKN-208ENST00000610470 MKRN1Q9UHC7 482 aaKnown RBP22.22■■□□□ 1.15
PRKN-208ENST00000610470 COL4A1P02462 1669 aa22.21■■□□□ 1.15
PRKN-208ENST00000610470 VAMP4O75379 141 aa22.21■■□□□ 1.15
PRKN-208ENST00000610470 TBC1D16Q8TBP0 767 aa22.21■■□□□ 1.15
PRKN-208ENST00000610470 CCDC85AQ96PX6 553 aaPredicted RBP22.21■■□□□ 1.15
PRKN-208ENST00000610470 YDJCA8MPS7 323 aa22.2■■□□□ 1.14
PRKN-208ENST00000610470 NEURL1BA8MQ27 555 aa22.2■■□□□ 1.14
PRKN-208ENST00000610470 RIMBP2O15034 1052 aa22.2■■□□□ 1.14
PRKN-208ENST00000610470 CTSWP56202 376 aa22.2■■□□□ 1.14
PRKN-208ENST00000610470 EXOSC9Q06265 439 aaKnown RBP22.2■■□□□ 1.14
PRKN-208ENST00000610470 FKBP5Q13451 457 aaPredicted RBP22.2■■□□□ 1.14
PRKN-208ENST00000610470 CWF19L2Q2TBE0 894 aaKnown RBP22.2■■□□□ 1.14
PRKN-208ENST00000610470 ANKRD18AQ8IVF6 992 aa22.2■■□□□ 1.14
PRKN-208ENST00000610470 MYH16Q9H6N6 1097 aa22.2■■□□□ 1.14
PRKN-208ENST00000610470 PODXL2Q9NZ53 605 aa22.2■■□□□ 1.14
PRKN-208ENST00000610470 PCNTO95613 3336 aa22.2■■□□□ 1.14
PRKN-208ENST00000610470 CDC5LQ99459 802 aaKnown RBP22.19■■□□□ 1.14
PRKN-208ENST00000610470 DBNDD1Q9H9R9 158 aa22.19■■□□□ 1.14
PRKN-208ENST00000610470 ANKIB1Q9P2G1 1089 aa22.19■■□□□ 1.14
PRKN-208ENST00000610470 CNTNAP1P78357 1384 aa22.19■■□□□ 1.14
PRKN-208ENST00000610470 IFFO2Q5TF58 517 aa22.18■■□□□ 1.14
PRKN-208ENST00000610470 ZC3H12CQ9C0D7 883 aaKnown RBP22.18■■□□□ 1.14
PRKN-208ENST00000610470 GGA1Q9UJY5 639 aa22.18■■□□□ 1.14
PRKN-208ENST00000610470 UFL1O94874 794 aa22.17■■□□□ 1.14
PRKN-208ENST00000610470 DNAAF4Q8WXU2 420 aa22.17■■□□□ 1.14
PRKN-208ENST00000610470 CACNA1FO60840 1977 aa22.17■■□□□ 1.14
PRKN-208ENST00000610470 H7C1W4 665 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms