RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 PDE8AO60658 829 aa17.06■□□□□ 0.32
SENP3-209ENST00000610454 CWF19L2Q2TBE0 894 aaKnown RBP17.06■□□□□ 0.32
SENP3-209ENST00000610454 CCDC152Q4G0S7 254 aa17.06■□□□□ 0.32
SENP3-209ENST00000610454 SUPT20HQ8NEM7 779 aa17.06■□□□□ 0.32
SENP3-209ENST00000610454 RRAGCQ9HB90 399 aa17.06■□□□□ 0.32
SENP3-209ENST00000610454 CDHR2Q9BYE9 1310 aa17.05■□□□□ 0.32
SENP3-209ENST00000610454 NEURL1BA8MQ27 555 aa17.05■□□□□ 0.32
SENP3-209ENST00000610454 IGKV5-2P06315 115 aa17.05■□□□□ 0.32
SENP3-209ENST00000610454 SLFN5Q08AF3 891 aa17.05■□□□□ 0.32
SENP3-209ENST00000610454 DPP8Q6V1X1 898 aaPredicted RBP17.05■□□□□ 0.32
SENP3-209ENST00000610454 SP8Q8IXZ3 490 aa17.05■□□□□ 0.32
SENP3-209ENST00000610454 MYH3P11055 1940 aa17.05■□□□□ 0.32
SENP3-209ENST00000610454 TOMM70O94826 608 aa17.04■□□□□ 0.32
SENP3-209ENST00000610454 LARGE2Q8N3Y3 721 aa17.04■□□□□ 0.32
SENP3-209ENST00000610454 MPNDQ8N594 471 aa17.04■□□□□ 0.32
SENP3-209ENST00000610454 LINS1Q8NG48 757 aa17.04■□□□□ 0.32
SENP3-209ENST00000610454 JARID2Q92833 1246 aaPredicted RBP17.04■□□□□ 0.32
SENP3-209ENST00000610454 SNED1Q8TER0 1413 aa17.04■□□□□ 0.32
SENP3-209ENST00000610454 VEGFAP15692 232 aaPredicted RBP17.03■□□□□ 0.32
SENP3-209ENST00000610454 UBE3BQ7Z3V4 1068 aa17.03■□□□□ 0.32
SENP3-209ENST00000610454 PPIP5K2O43314 1243 aa17.02■□□□□ 0.32
SENP3-209ENST00000610454 GCKRQ14397 625 aa17.02■□□□□ 0.32
SENP3-209ENST00000610454 CELF1Q92879 486 aaKnown RBP17.02■□□□□ 0.32
SENP3-209ENST00000610454 CDCA7LQ96GN5 454 aa17.02■□□□□ 0.32
SENP3-209ENST00000610454 LRRC37AA6NMS7 1700 aa17.01■□□□□ 0.31
SENP3-209ENST00000610454 WDR90Q96KV7 1748 aa17.01■□□□□ 0.31
SENP3-209ENST00000610454 F6X3S4 739 aa17.01■□□□□ 0.31
SENP3-209ENST00000610454 CTSWP56202 376 aa17.01■□□□□ 0.31
SENP3-209ENST00000610454 EIF6P56537 245 aaKnown RBP17.01■□□□□ 0.31
SENP3-209ENST00000610454 RPS8P62241 208 aaKnown RBP17.01■□□□□ 0.31
SENP3-209ENST00000610454 NIM1KQ8IY84 436 aa17.01■□□□□ 0.31
SENP3-209ENST00000610454 CCDC85AQ96PX6 553 aaPredicted RBP17.01■□□□□ 0.31
SENP3-209ENST00000610454 VPS33BQ9H267 617 aa17.01■□□□□ 0.31
SENP3-209ENST00000610454 DDNO94850 711 aaPredicted RBP17■□□□□ 0.31
SENP3-209ENST00000610454 SLC4A10Q6U841 1118 aa17■□□□□ 0.31
SENP3-209ENST00000610454 SLC51AQ86UW1 340 aa17■□□□□ 0.31
SENP3-209ENST00000610454 RBM46Q8TBY0 533 aaKnown RBP17■□□□□ 0.31
SENP3-209ENST00000610454 CDC5LQ99459 802 aaKnown RBP17■□□□□ 0.31
SENP3-209ENST00000610454 IQCA1LA6NCM1 817 aa16.99■□□□□ 0.31
SENP3-209ENST00000610454 H7C1W4 665 aa16.99■□□□□ 0.31
SENP3-209ENST00000610454 AOC3Q16853 763 aa16.99■□□□□ 0.31
SENP3-209ENST00000610454 ANKRD18AQ8IVF6 992 aa16.99■□□□□ 0.31
SENP3-209ENST00000610454 SEC31BQ9NQW1 1179 aa16.99■□□□□ 0.31
SENP3-209ENST00000610454 NSFL1CQ9UNZ2 370 aaKnown RBP16.99■□□□□ 0.31
SENP3-209ENST00000610454 ZNF541Q9H0D2 1346 aa16.98■□□□□ 0.31
SENP3-209ENST00000610454 FZD9O00144 591 aa16.98■□□□□ 0.31
SENP3-209ENST00000610454 CT47B1P0C2W7 299 aaPredicted RBP16.98■□□□□ 0.31
SENP3-209ENST00000610454 RTFDC1Q9BY42 306 aaPredicted RBP16.98■□□□□ 0.31
SENP3-209ENST00000610454 PTPRCP08575 1304 aa16.97■□□□□ 0.31
SENP3-209ENST00000610454 C6orf229H3BNL8 230 aa16.97■□□□□ 0.31
SENP3-209ENST00000610454 HNRNPUQ00839 825 aaKnown RBP eCLIP16.97■□□□□ 0.31
SENP3-209ENST00000610454 ALDH1L2Q3SY69 923 aa16.97■□□□□ 0.31
SENP3-209ENST00000610454 BEND3Q5T5X7 828 aa16.97■□□□□ 0.31
SENP3-209ENST00000610454 GPC2Q8N158 579 aa16.97■□□□□ 0.31
SENP3-209ENST00000610454 MRPL50Q8N5N7 158 aaKnown RBP16.97■□□□□ 0.31
SENP3-209ENST00000610454 SMC1BQ8NDV3 1235 aa16.97■□□□□ 0.31
SENP3-209ENST00000610454 TTLL11Q8NHH1 800 aa16.97■□□□□ 0.31
SENP3-209ENST00000610454 BCL2L13Q9BXK5 485 aa16.97■□□□□ 0.31
SENP3-209ENST00000610454 SRCIN1Q9C0H9 1055 aa16.97■□□□□ 0.31
SENP3-209ENST00000610454 SMC4Q9NTJ3 1288 aa16.97■□□□□ 0.31
SENP3-209ENST00000610454 C9orf78Q9NZ63 289 aaPredicted RBP16.97■□□□□ 0.31
SENP3-209ENST00000610454 ANKIB1Q9P2G1 1089 aa16.97■□□□□ 0.31
SENP3-209ENST00000610454 GJA3Q9Y6H8 435 aa16.97■□□□□ 0.31
SENP3-209ENST00000610454 SCN4AP35499 1836 aa16.97■□□□□ 0.31
SENP3-209ENST00000610454 SPEF2Q9C093 1822 aa16.96■□□□□ 0.31
SENP3-209ENST00000610454 ALDH1L1O75891 902 aa16.96■□□□□ 0.31
SENP3-209ENST00000610454 FSTL1Q12841 308 aa16.96■□□□□ 0.31
SENP3-209ENST00000610454 SSH1Q8WYL5 1049 aa16.96■□□□□ 0.31
SENP3-209ENST00000610454 EYA3Q99504 573 aa16.96■□□□□ 0.31
SENP3-209ENST00000610454 COL4A5P29400 1685 aa16.95■□□□□ 0.3
SENP3-209ENST00000610454 RTL9Q8NET4 1388 aa16.95■□□□□ 0.3
SENP3-209ENST00000610454 HSPA6P17066 643 aa16.95■□□□□ 0.3
SENP3-209ENST00000610454 IGHMBP2P38935 993 aaKnown RBP16.95■□□□□ 0.3
SENP3-209ENST00000610454 GPSM2P81274 684 aa16.95■□□□□ 0.3
SENP3-209ENST00000610454 KIAA2012Q0VF49 1180 aa16.95■□□□□ 0.3
SENP3-209ENST00000610454 WASHC4Q2M389 1173 aa16.95■□□□□ 0.3
SENP3-209ENST00000610454 TRMT2AQ8IZ69 625 aaKnown RBP16.95■□□□□ 0.3
SENP3-209ENST00000610454 L3MBTL3Q96JM7 780 aaPredicted RBP16.95■□□□□ 0.3
SENP3-209ENST00000610454 PLA2G12BQ9BX93 195 aa16.95■□□□□ 0.3
SENP3-209ENST00000610454 GREM2Q9H772 168 aa16.95■□□□□ 0.3
SENP3-209ENST00000610454 COL4A1P02462 1669 aa16.94■□□□□ 0.3
SENP3-209ENST00000610454 DUOX1Q9NRD9 1551 aa16.94■□□□□ 0.3
SENP3-209ENST00000610454 G3V3G9 751 aa16.94■□□□□ 0.3
SENP3-209ENST00000610454 GRM8O00222 908 aa16.94■□□□□ 0.3
SENP3-209ENST00000610454 LMOD1P29536 600 aaPredicted RBP16.94■□□□□ 0.3
SENP3-209ENST00000610454 DCAF8Q5TAQ9 597 aa16.94■□□□□ 0.3
SENP3-209ENST00000610454 HACL1Q9UJ83 578 aa16.94■□□□□ 0.3
SENP3-209ENST00000610454 ZNRF3Q9ULT6 936 aa16.94■□□□□ 0.3
SENP3-209ENST00000610454 CHMP3Q9Y3E7 222 aa16.94■□□□□ 0.3
SENP3-209ENST00000610454 UFL1O94874 794 aa16.93■□□□□ 0.3
SENP3-209ENST00000610454 CASP7P55210 303 aa16.93■□□□□ 0.3
SENP3-209ENST00000610454 MPHOSPH8Q99549 860 aa16.93■□□□□ 0.3
SENP3-209ENST00000610454 GGA1Q9UJY5 639 aa16.93■□□□□ 0.3
SENP3-209ENST00000610454 XDHP47989 1333 aa16.93■□□□□ 0.3
SENP3-209ENST00000610454 POTECB2RU33 542 aa16.92■□□□□ 0.3
SENP3-209ENST00000610454 ITGA6P23229 1130 aa16.92■□□□□ 0.3
SENP3-209ENST00000610454 TNIP1Q15025 636 aa16.92■□□□□ 0.3
SENP3-209ENST00000610454 FAM161AQ3B820 660 aa16.92■□□□□ 0.3
SENP3-209ENST00000610454 TBC1D16Q8TBP0 767 aa16.92■□□□□ 0.3
SENP3-209ENST00000610454 ZC3H12CQ9C0D7 883 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms