RNA–Protein interactions for RNA: ENST00000609774.1

LMBR1-221, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-221ENST00000609774 IFNL2Q8IZJ0 200 aa9.38□□□□□ -0.91
LMBR1-221ENST00000609774 ZNF710Q8N1W2 664 aa9.38□□□□□ -0.91
LMBR1-221ENST00000609774 GCC1Q96CN9 775 aa9.38□□□□□ -0.91
LMBR1-221ENST00000609774 PARP3Q9Y6F1 533 aa9.38□□□□□ -0.91
LMBR1-221ENST00000609774 DICER1Q9UPY3 1922 aaKnown RBP9.38□□□□□ -0.91
LMBR1-221ENST00000609774 RLBP1P12271 317 aa9.37□□□□□ -0.91
LMBR1-221ENST00000609774 LMNB1P20700 586 aa9.37□□□□□ -0.91
LMBR1-221ENST00000609774 TM4SF1P30408 202 aa9.37□□□□□ -0.91
LMBR1-221ENST00000609774 RRAGDQ9NQL2 400 aaPredicted RBP9.37□□□□□ -0.91
LMBR1-221ENST00000609774 RRP7AQ9Y3A4 280 aaKnown RBP9.37□□□□□ -0.91
LMBR1-221ENST00000609774 CCDC88AQ3V6T2 1871 aa9.36□□□□□ -0.91
LMBR1-221ENST00000609774 USP42Q9H9J4 1324 aaKnown RBP9.36□□□□□ -0.91
LMBR1-221ENST00000609774 POTECB2RU33 542 aa9.36□□□□□ -0.91
LMBR1-221ENST00000609774 RFC4P35249 363 aa9.36□□□□□ -0.91
LMBR1-221ENST00000609774 NUCB1Q02818 461 aa9.36□□□□□ -0.91
LMBR1-221ENST00000609774 CCDC173Q0VFZ6 552 aa9.36□□□□□ -0.91
LMBR1-221ENST00000609774 BMP2KLQ5H9B9 411 aa9.36□□□□□ -0.91
LMBR1-221ENST00000609774 TIAM2Q8IVF5 1701 aa9.36□□□□□ -0.91
LMBR1-221ENST00000609774 ESPNB1AK53 854 aa9.35□□□□□ -0.91
LMBR1-221ENST00000609774 TNNT2P45379 298 aaPredicted RBP9.35□□□□□ -0.91
LMBR1-221ENST00000609774 BRPF1P55201 1214 aaPredicted RBP9.35□□□□□ -0.91
LMBR1-221ENST00000609774 DDR1Q08345 913 aa9.35□□□□□ -0.91
LMBR1-221ENST00000609774 VARS2Q5ST30 1063 aaKnown RBP9.35□□□□□ -0.91
LMBR1-221ENST00000609774 ARHGAP45Q92619 1136 aa9.35□□□□□ -0.91
LMBR1-221ENST00000609774 IBTKQ9P2D0 1353 aaPredicted RBP9.35□□□□□ -0.91
LMBR1-221ENST00000609774 AFDNP55196 1824 aaKnown RBP9.34□□□□□ -0.91
LMBR1-221ENST00000609774 POLRMTO00411 1230 aaKnown RBP9.34□□□□□ -0.91
LMBR1-221ENST00000609774 TRIM27P14373 513 aa9.34□□□□□ -0.91
LMBR1-221ENST00000609774 TMPOP42166 694 aaKnown RBP9.34□□□□□ -0.91
LMBR1-221ENST00000609774 RGS19P49795 217 aa9.34□□□□□ -0.91
LMBR1-221ENST00000609774 EXOSC9Q06265 439 aaKnown RBP9.34□□□□□ -0.91
LMBR1-221ENST00000609774 HSP90AA2PQ14568 343 aaPredicted RBP9.34□□□□□ -0.91
LMBR1-221ENST00000609774 RAB3GAP1Q15042 981 aa9.34□□□□□ -0.91
LMBR1-221ENST00000609774 DOK7Q18PE1 504 aa9.34□□□□□ -0.91
LMBR1-221ENST00000609774 CHD1LQ86WJ1 897 aa9.34□□□□□ -0.91
LMBR1-221ENST00000609774 EYA1Q99502 592 aa9.34□□□□□ -0.91
LMBR1-221ENST00000609774 BCL2L13Q9BXK5 485 aa9.34□□□□□ -0.91
LMBR1-221ENST00000609774 GZF1Q9H116 711 aaPredicted RBP9.34□□□□□ -0.91
LMBR1-221ENST00000609774 GGNBP2Q9H3C7 697 aa9.34□□□□□ -0.91
LMBR1-221ENST00000609774 ZBTB40Q9NUA8 1239 aa9.34□□□□□ -0.91
LMBR1-221ENST00000609774 K7ELQ4 463 aaPredicted RBP9.33□□□□□ -0.92
LMBR1-221ENST00000609774 NUCB2P80303 420 aa9.33□□□□□ -0.92
LMBR1-221ENST00000609774 NOB1Q9ULX3 412 aaKnown RBP9.33□□□□□ -0.92
LMBR1-221ENST00000609774 FER1L6Q2WGJ9 1857 aa9.33□□□□□ -0.92
LMBR1-221ENST00000609774 CNTNAP1P78357 1384 aa9.33□□□□□ -0.92
LMBR1-221ENST00000609774 TJP1Q07157 1748 aa9.33□□□□□ -0.92
LMBR1-221ENST00000609774 PASKQ96RG2 1323 aa9.32□□□□□ -0.92
LMBR1-221ENST00000609774 U2SURPO15042 1029 aaKnown RBP9.32□□□□□ -0.92
LMBR1-221ENST00000609774 DDIT3P35638 169 aa9.32□□□□□ -0.92
LMBR1-221ENST00000609774 TERF1P54274 439 aa9.32□□□□□ -0.92
LMBR1-221ENST00000609774 LMOD3Q0VAK6 560 aa9.32□□□□□ -0.92
LMBR1-221ENST00000609774 CASC1Q6TDU7 716 aa9.32□□□□□ -0.92
LMBR1-221ENST00000609774 CLEC17AQ6ZS10 378 aa9.32□□□□□ -0.92
LMBR1-221ENST00000609774 SPRYD3Q8NCJ5 442 aa9.32□□□□□ -0.92
LMBR1-221ENST00000609774 SSH1Q8WYL5 1049 aa9.32□□□□□ -0.92
LMBR1-221ENST00000609774 KHSRPQ92945 711 aaKnown RBP eCLIP9.32□□□□□ -0.927e-7■■■■□ 19.3
LMBR1-221ENST00000609774 SCN4AP35499 1836 aa9.32□□□□□ -0.92
LMBR1-221ENST00000609774 LTBP3Q9NS15 1303 aa9.31□□□□□ -0.92
LMBR1-221ENST00000609774 FOXN1O15353 648 aa9.31□□□□□ -0.92
LMBR1-221ENST00000609774 DIAPH1O60610 1272 aaKnown RBP9.31□□□□□ -0.92
LMBR1-221ENST00000609774 CDC45O75419 566 aa9.31□□□□□ -0.92
LMBR1-221ENST00000609774 CHRNA5P30532 468 aa9.31□□□□□ -0.92
LMBR1-221ENST00000609774 CTCFP49711 727 aaPredicted RBP9.31□□□□□ -0.92
LMBR1-221ENST00000609774 RIPK4P57078 832 aa9.31□□□□□ -0.92
LMBR1-221ENST00000609774 RABEP1Q15276 862 aa9.31□□□□□ -0.92
LMBR1-221ENST00000609774 HS1BP3Q53T59 392 aa9.31□□□□□ -0.92
LMBR1-221ENST00000609774 GPR153Q6NV75 609 aa9.31□□□□□ -0.92
LMBR1-221ENST00000609774 TMEM57Q8N5G2 664 aa9.31□□□□□ -0.92
LMBR1-221ENST00000609774 FBXO22Q8NEZ5 403 aa9.31□□□□□ -0.92
LMBR1-221ENST00000609774 TNPO1Q92973 898 aaKnown RBP9.31□□□□□ -0.92
LMBR1-221ENST00000609774 CWC22Q9HCG8 908 aaKnown RBP9.31□□□□□ -0.92
LMBR1-221ENST00000609774 WBP1LQ9NX94 342 aa9.31□□□□□ -0.92
LMBR1-221ENST00000609774 EMILIN1Q9Y6C2 1016 aa9.31□□□□□ -0.92
LMBR1-221ENST00000609774 NFKBIEO00221 500 aa9.3□□□□□ -0.92
LMBR1-221ENST00000609774 MSNP26038 577 aaKnown RBP9.3□□□□□ -0.92
LMBR1-221ENST00000609774 CRKLP46109 303 aaKnown RBP9.3□□□□□ -0.92
LMBR1-221ENST00000609774 INTS5Q6P9B9 1019 aaKnown RBP9.3□□□□□ -0.92
LMBR1-221ENST00000609774 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.3□□□□□ -0.92
LMBR1-221ENST00000609774 TTLL6Q8N841 843 aa9.3□□□□□ -0.92
LMBR1-221ENST00000609774 PLEKHF1Q96S99 279 aa9.3□□□□□ -0.92
LMBR1-221ENST00000609774 MAP7D2Q96T17 732 aa9.3□□□□□ -0.92
LMBR1-221ENST00000609774 API5Q9BZZ5 524 aaKnown RBP9.3□□□□□ -0.92
LMBR1-221ENST00000609774 GNAI1P63096 354 aa9.29□□□□□ -0.92
LMBR1-221ENST00000609774 RASSF7Q02833 373 aa9.29□□□□□ -0.92
LMBR1-221ENST00000609774 KLHL40Q2TBA0 621 aa9.29□□□□□ -0.92
LMBR1-221ENST00000609774 TSR2Q969E8 191 aaKnown RBP9.29□□□□□ -0.92
LMBR1-221ENST00000609774 PPP1R9BQ96SB3 815 aa9.29□□□□□ -0.92
LMBR1-221ENST00000609774 TNNQ9UQP3 1299 aa9.29□□□□□ -0.92
LMBR1-221ENST00000609774 ADAMTSL1Q8N6G6 1762 aa9.29□□□□□ -0.92
LMBR1-221ENST00000609774 COL3A1P02461 1466 aaPredicted RBP9.28□□□□□ -0.92
LMBR1-221ENST00000609774 THSD7BQ9C0I4 1608 aa9.28□□□□□ -0.92
LMBR1-221ENST00000609774 SCN11AQ9UI33 1791 aa9.28□□□□□ -0.92
LMBR1-221ENST00000609774 NASPP49321 788 aaPredicted RBP9.28□□□□□ -0.92
LMBR1-221ENST00000609774 AMOTQ4VCS5 1084 aa9.28□□□□□ -0.92
LMBR1-221ENST00000609774 ARSIQ5FYB1 569 aa9.28□□□□□ -0.92
LMBR1-221ENST00000609774 ANKRD45Q5TZF3 282 aa9.28□□□□□ -0.92
LMBR1-221ENST00000609774 ZSCAN30Q86W11 494 aa9.28□□□□□ -0.92
LMBR1-221ENST00000609774 PANK2Q9BZ23 570 aa9.28□□□□□ -0.92
LMBR1-221ENST00000609774 LNPKQ9C0E8 428 aa9.28□□□□□ -0.92
LMBR1-221ENST00000609774 POLKQ9UBT6 870 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms