RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, human

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTCFL-222	ENST00000609232	CNNM1	Q9NRU3	951 aa		11.81	□□□□□ -0.52
CTCFL-222	ENST00000609232	ABCF2	Q9UG63	623 aa		11.81	□□□□□ -0.52
CTCFL-222	ENST00000609232	SCN11A	Q9UI33	1791 aa		11.81	□□□□□ -0.52
CTCFL-222	ENST00000609232	ERBB4	Q15303	1308 aa		11.81	□□□□□ -0.52
CTCFL-222	ENST00000609232	IDH1	O75874	414 aa	Known RBP	11.81	□□□□□ -0.52
CTCFL-222	ENST00000609232	CAST	P20810	708 aa	Known RBP	11.81	□□□□□ -0.52
CTCFL-222	ENST00000609232	CLCN1	P35523	988 aa		11.81	□□□□□ -0.52
CTCFL-222	ENST00000609232	MARCH10	Q8NA82	808 aa	Predicted RBP	11.81	□□□□□ -0.52
CTCFL-222	ENST00000609232	CERK	Q8TCT0	537 aa		11.81	□□□□□ -0.52
CTCFL-222	ENST00000609232	GPATCH3	Q96I76	525 aa		11.81	□□□□□ -0.52
CTCFL-222	ENST00000609232	JAKMIP1	Q96N16	626 aa	Known RBP	11.81	□□□□□ -0.52
CTCFL-222	ENST00000609232	ZHX1	Q9UKY1	873 aa	Predicted RBP	11.81	□□□□□ -0.52
CTCFL-222	ENST00000609232	THRAP3	Q9Y2W1	955 aa	Known RBP	11.81	□□□□□ -0.52
CTCFL-222	ENST00000609232	PHLPP1	O60346	1717 aa		11.81	□□□□□ -0.52
CTCFL-222	ENST00000609232	PLEKHG2	Q9H7P9	1386 aa		11.81	□□□□□ -0.52
CTCFL-222	ENST00000609232	TAF5L	O75529	589 aa		11.81	□□□□□ -0.52
CTCFL-222	ENST00000609232	POLA2	Q14181	598 aa		11.81	□□□□□ -0.52
CTCFL-222	ENST00000609232	ERC1	Q8IUD2	1116 aa		11.81	□□□□□ -0.52
CTCFL-222	ENST00000609232	IL25	Q9H293	177 aa		11.81	□□□□□ -0.52
CTCFL-222	ENST00000609232	SPATA31A5	Q5VU36	1347 aa		11.8	□□□□□ -0.52
CTCFL-222	ENST00000609232	SPATA31A7	Q8IWB4	1347 aa		11.8	□□□□□ -0.52
CTCFL-222	ENST00000609232	KCNQ2	O43526	872 aa		11.8	□□□□□ -0.52
CTCFL-222	ENST00000609232	ST18	O60284	1047 aa		11.8	□□□□□ -0.52
CTCFL-222	ENST00000609232	PUS3	Q9BZE2	481 aa	Known RBP	11.8	□□□□□ -0.52
CTCFL-222	ENST00000609232	ZBTB1	Q9Y2K1	713 aa		11.8	□□□□□ -0.52
CTCFL-222	ENST00000609232	CCDC83	Q8IWF9	413 aa		11.8	□□□□□ -0.52
CTCFL-222	ENST00000609232	TRMT112	Q9UI30	125 aa	Known RBP	11.8	□□□□□ -0.52
CTCFL-222	ENST00000609232	CENPF	P49454	3210 aa		11.8	□□□□□ -0.52
CTCFL-222	ENST00000609232	JCAD	Q9P266	1359 aa		11.8	□□□□□ -0.52
CTCFL-222	ENST00000609232	TRAK2	O60296	914 aa		11.8	□□□□□ -0.52
CTCFL-222	ENST00000609232	MCC	P23508	829 aa		11.8	□□□□□ -0.52
CTCFL-222	ENST00000609232	TFCP2	Q12800	502 aa		11.8	□□□□□ -0.52
CTCFL-222	ENST00000609232	PARP4	Q9UKK3	1724 aa	Known RBP	11.8	□□□□□ -0.52
CTCFL-222	ENST00000609232	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.8	□□□□□ -0.52
CTCFL-222	ENST00000609232	RXRA	P19793	462 aa		11.79	□□□□□ -0.52
CTCFL-222	ENST00000609232	CCT2	P78371	535 aa	Known RBP	11.79	□□□□□ -0.52
CTCFL-222	ENST00000609232	KAZALD1	Q96I82	304 aa		11.79	□□□□□ -0.52
CTCFL-222	ENST00000609232	GOLGA6L22	H0YM25	854 aa		11.79	□□□□□ -0.52
CTCFL-222	ENST00000609232	ERC2	O15083	957 aa		11.79	□□□□□ -0.52
CTCFL-222	ENST00000609232	HSPA1L	P34931	641 aa		11.79	□□□□□ -0.52
CTCFL-222	ENST00000609232	LRP10	Q7Z4F1	713 aa		11.79	□□□□□ -0.52
CTCFL-222	ENST00000609232	REC8	O95072	547 aa		11.78	□□□□□ -0.52
CTCFL-222	ENST00000609232	VIRMA	Q69YN4	1812 aa	Known RBP	11.78	□□□□□ -0.52
CTCFL-222	ENST00000609232	DZIP3	Q86Y13	1208 aa	Known RBP	11.78	□□□□□ -0.52
CTCFL-222	ENST00000609232	TNPO1	Q92973	898 aa	Known RBP	11.78	□□□□□ -0.52
CTCFL-222	ENST00000609232	DBNDD2	Q9BQY9	259 aa		11.78	□□□□□ -0.52
CTCFL-222	ENST00000609232	TFIP11	Q9UBB9	837 aa	Known RBP	11.78	□□□□□ -0.52
CTCFL-222	ENST00000609232	ABCA3	Q99758	1704 aa		11.78	□□□□□ -0.52
CTCFL-222	ENST00000609232	COL14A1	Q05707	1796 aa	Known RBP	11.78	□□□□□ -0.52
CTCFL-222	ENST00000609232	TCIRG1	Q13488	830 aa		11.77	□□□□□ -0.53
CTCFL-222	ENST00000609232	CCDC57	Q2TAC2	916 aa		11.77	□□□□□ -0.53
CTCFL-222	ENST00000609232	LRRC24	Q50LG9	513 aa		11.77	□□□□□ -0.53
CTCFL-222	ENST00000609232	CCDC191	Q8NCU4	936 aa		11.77	□□□□□ -0.53
CTCFL-222	ENST00000609232	PKD1L3	Q7Z443	1732 aa		11.77	□□□□□ -0.53
CTCFL-222	ENST00000609232	LOC102724428	A0A0B4J2F2	783 aa		11.77	□□□□□ -0.53
CTCFL-222	ENST00000609232	VGLL3	A8MV65	326 aa		11.77	□□□□□ -0.53
CTCFL-222	ENST00000609232	ESPN	B1AK53	854 aa		11.77	□□□□□ -0.53
CTCFL-222	ENST00000609232	MCM4	P33991	863 aa		11.77	□□□□□ -0.53
CTCFL-222	ENST00000609232	MRE11	P49959	708 aa		11.77	□□□□□ -0.53
CTCFL-222	ENST00000609232	SIK1	P57059	783 aa		11.77	□□□□□ -0.53
CTCFL-222	ENST00000609232	MTX1	Q13505	466 aa		11.77	□□□□□ -0.53
CTCFL-222	ENST00000609232	SLC4A9	Q96Q91	983 aa		11.77	□□□□□ -0.53
CTCFL-222	ENST00000609232	MRC1	P22897	1456 aa		11.77	□□□□□ -0.53
CTCFL-222	ENST00000609232	CYP19A1	P11511	503 aa	Predicted RBP	11.76	□□□□□ -0.53
CTCFL-222	ENST00000609232	CHAF1A	Q13111	956 aa	Predicted RBP	11.76	□□□□□ -0.53
CTCFL-222	ENST00000609232	CHMP5	Q9NZZ3	219 aa		11.76	□□□□□ -0.53
CTCFL-222	ENST00000609232	PTMA	P06454	111 aa	Known RBP	11.76	□□□□□ -0.53
CTCFL-222	ENST00000609232	CNTROB	Q8N137	903 aa		11.76	□□□□□ -0.53
CTCFL-222	ENST00000609232	EAF2	Q96CJ1	260 aa	Predicted RBP	11.76	□□□□□ -0.53
CTCFL-222	ENST00000609232	HLF	Q16534	295 aa		11.76	□□□□□ -0.53
CTCFL-222	ENST00000609232	PTF1A	Q7RTS3	328 aa		11.76	□□□□□ -0.53
CTCFL-222	ENST00000609232	ECHDC1	Q9NTX5	307 aa		11.76	□□□□□ -0.53
CTCFL-222	ENST00000609232		K7ELQ4	463 aa	Predicted RBP	11.75	□□□□□ -0.53
CTCFL-222	ENST00000609232	GLRX3	O76003	335 aa	Known RBP	11.75	□□□□□ -0.53
CTCFL-222	ENST00000609232	VPS37D	Q86XT2	251 aa		11.75	□□□□□ -0.53
CTCFL-222	ENST00000609232	ANP32B	Q92688	251 aa	Known RBP	11.75	□□□□□ -0.53
CTCFL-222	ENST00000609232	PRDM10	Q9NQV6	1147 aa		11.75	□□□□□ -0.53
CTCFL-222	ENST00000609232	BCL9	O00512	1426 aa		11.75	□□□□□ -0.53
CTCFL-222	ENST00000609232	LDHAL6A	Q6ZMR3	332 aa		11.75	□□□□□ -0.53
CTCFL-222	ENST00000609232	CREBRF	Q8IUR6	639 aa		11.75	□□□□□ -0.53
CTCFL-222	ENST00000609232	OSBPL3	Q9H4L5	887 aa		11.75	□□□□□ -0.53
CTCFL-222	ENST00000609232	SASH1	O94885	1247 aa		11.75	□□□□□ -0.53
CTCFL-222	ENST00000609232	COL9A3	Q14050	684 aa	Predicted RBP	11.75	□□□□□ -0.53
CTCFL-222	ENST00000609232	VPS72	Q15906	364 aa		11.75	□□□□□ -0.53
CTCFL-222	ENST00000609232	BARGIN	Q6ZT62	677 aa		11.75	□□□□□ -0.53
CTCFL-222	ENST00000609232	TNS2	Q63HR2	1409 aa		11.75	□□□□□ -0.53
CTCFL-222	ENST00000609232	C5	P01031	1676 aa		11.74	□□□□□ -0.53
CTCFL-222	ENST00000609232	GOLGA6L4	A6NEF3	574 aa		11.74	□□□□□ -0.53
CTCFL-222	ENST00000609232	METTL24	Q5JXM2	366 aa		11.74	□□□□□ -0.53
CTCFL-222	ENST00000609232	CCDC87	Q9NVE4	849 aa		11.74	□□□□□ -0.53
CTCFL-222	ENST00000609232	DISP2	A7MBM2	1401 aa		11.74	□□□□□ -0.53
CTCFL-222	ENST00000609232	MAP3K15	Q6ZN16	1313 aa		11.74	□□□□□ -0.53
CTCFL-222	ENST00000609232	CRKL	P46109	303 aa	Known RBP	11.74	□□□□□ -0.53
CTCFL-222	ENST00000609232	CAMK4	Q16566	473 aa		11.74	□□□□□ -0.53
CTCFL-222	ENST00000609232	SMARCC1	Q92922	1105 aa	Predicted RBP	11.74	□□□□□ -0.53
CTCFL-222	ENST00000609232	SIPA1L3	O60292	1781 aa	Predicted RBP	11.74	□□□□□ -0.53
CTCFL-222	ENST00000609232	UTY	O14607	1347 aa		11.74	□□□□□ -0.53
CTCFL-222	ENST00000609232	WTIP	A6NIX2	430 aa	Predicted RBP	11.74	□□□□□ -0.53
CTCFL-222	ENST00000609232		H7C1W4	665 aa		11.74	□□□□□ -0.53
CTCFL-222	ENST00000609232	COL16A1	Q07092	1604 aa	Predicted RBP	11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms