RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 ZC3H4Q9UPT8 1303 aaKnown RBP18.51■□□□□ 0.55
HDDC2-204ENST00000608295 GLTPD2A6NH11 291 aa18.51■□□□□ 0.55
HDDC2-204ENST00000608295 PCCAP05165 728 aaPredicted RBP18.51■□□□□ 0.55
HDDC2-204ENST00000608295 TRIM28Q13263 835 aaKnown RBP18.51■□□□□ 0.55
HDDC2-204ENST00000608295 DNAAF4Q8WXU2 420 aa18.51■□□□□ 0.55
HDDC2-204ENST00000608295 TMX4Q9H1E5 349 aaPredicted RBP18.51■□□□□ 0.55
HDDC2-204ENST00000608295 NEURL1BA8MQ27 555 aa18.5■□□□□ 0.55
HDDC2-204ENST00000608295 DDNO94850 711 aaPredicted RBP18.5■□□□□ 0.55
HDDC2-204ENST00000608295 UBE3BQ7Z3V4 1068 aa18.5■□□□□ 0.55
HDDC2-204ENST00000608295 SEC31BQ9NQW1 1179 aa18.5■□□□□ 0.55
HDDC2-204ENST00000608295 ATP6V0A2Q9Y487 856 aa18.5■□□□□ 0.55
HDDC2-204ENST00000608295 DUOX1Q9NRD9 1551 aa18.5■□□□□ 0.55
HDDC2-204ENST00000608295 WDR90Q96KV7 1748 aa18.49■□□□□ 0.55
HDDC2-204ENST00000608295 E9PSI1 815 aa18.49■□□□□ 0.55
HDDC2-204ENST00000608295 AOC3Q16853 763 aa18.49■□□□□ 0.55
HDDC2-204ENST00000608295 LARGE2Q8N3Y3 721 aa18.49■□□□□ 0.55
HDDC2-204ENST00000608295 PPIP5K2O43314 1243 aa18.48■□□□□ 0.55
HDDC2-204ENST00000608295 SLFN5Q08AF3 891 aa18.48■□□□□ 0.55
HDDC2-204ENST00000608295 SLC4A10Q6U841 1118 aa18.48■□□□□ 0.55
HDDC2-204ENST00000608295 DPP8Q6V1X1 898 aaPredicted RBP18.48■□□□□ 0.55
HDDC2-204ENST00000608295 PDE8AO60658 829 aa18.47■□□□□ 0.55
HDDC2-204ENST00000608295 SF3B3Q15393 1217 aaKnown RBP18.47■□□□□ 0.55
HDDC2-204ENST00000608295 CC2D2BQ6DHV5 1058 aa18.47■□□□□ 0.55
HDDC2-204ENST00000608295 DPY19L2Q6NUT2 758 aa18.47■□□□□ 0.55
HDDC2-204ENST00000608295 GPR101Q96P66 508 aaPredicted RBP18.47■□□□□ 0.55
HDDC2-204ENST00000608295 PSMD1Q99460 953 aa18.47■□□□□ 0.55
HDDC2-204ENST00000608295 GJA3Q9Y6H8 435 aa18.46■□□□□ 0.55
HDDC2-204ENST00000608295 BBOX1O75936 387 aa18.45■□□□□ 0.54
HDDC2-204ENST00000608295 CTSWP56202 376 aa18.45■□□□□ 0.54
HDDC2-204ENST00000608295 CCDC152Q4G0S7 254 aa18.45■□□□□ 0.54
HDDC2-204ENST00000608295 MPNDQ8N594 471 aa18.45■□□□□ 0.54
HDDC2-204ENST00000608295 JDP2Q8WYK2 163 aa18.45■□□□□ 0.54
HDDC2-204ENST00000608295 CDHR2Q9BYE9 1310 aa18.45■□□□□ 0.54
HDDC2-204ENST00000608295 LTBP1Q14766 1721 aa18.44■□□□□ 0.54
HDDC2-204ENST00000608295 TOMM70O94826 608 aa18.44■□□□□ 0.54
HDDC2-204ENST00000608295 GCKRQ14397 625 aa18.44■□□□□ 0.54
HDDC2-204ENST00000608295 SP8Q8IXZ3 490 aa18.44■□□□□ 0.54
HDDC2-204ENST00000608295 NIM1KQ8IY84 436 aa18.44■□□□□ 0.54
HDDC2-204ENST00000608295 NSFL1CQ9UNZ2 370 aaKnown RBP18.44■□□□□ 0.54
HDDC2-204ENST00000608295 POTECB2RU33 542 aa18.43■□□□□ 0.54
HDDC2-204ENST00000608295 VEGFAP15692 232 aaPredicted RBP18.43■□□□□ 0.54
HDDC2-204ENST00000608295 GPSM2P81274 684 aa18.43■□□□□ 0.54
HDDC2-204ENST00000608295 HNRNPUQ00839 825 aaKnown RBP eCLIP18.43■□□□□ 0.54
HDDC2-204ENST00000608295 LINS1Q8NG48 757 aa18.43■□□□□ 0.54
HDDC2-204ENST00000608295 GREM2Q9H772 168 aa18.43■□□□□ 0.54
HDDC2-204ENST00000608295 RIMBP2O15034 1052 aa18.42■□□□□ 0.54
HDDC2-204ENST00000608295 POTEIP0CG38 1075 aa18.42■□□□□ 0.54
HDDC2-204ENST00000608295 POTEJP0CG39 1038 aa18.42■□□□□ 0.54
HDDC2-204ENST00000608295 HSP90B1P14625 803 aaKnown RBP18.42■□□□□ 0.54
HDDC2-204ENST00000608295 MRPL50Q8N5N7 158 aaKnown RBP18.42■□□□□ 0.54
HDDC2-204ENST00000608295 SSH1Q8WYL5 1049 aa18.42■□□□□ 0.54
HDDC2-204ENST00000608295 C6orf229H3BNL8 230 aa18.41■□□□□ 0.54
HDDC2-204ENST00000608295 EIF6P56537 245 aaKnown RBP18.41■□□□□ 0.54
HDDC2-204ENST00000608295 RPS8P62241 208 aaKnown RBP18.41■□□□□ 0.54
HDDC2-204ENST00000608295 FAM161AQ3B820 660 aa18.41■□□□□ 0.54
HDDC2-204ENST00000608295 BEND3Q5T5X7 828 aa18.41■□□□□ 0.54
HDDC2-204ENST00000608295 SUPT20HQ8NEM7 779 aa18.41■□□□□ 0.54
HDDC2-204ENST00000608295 SMC4Q9NTJ3 1288 aa18.41■□□□□ 0.54
HDDC2-204ENST00000608295 CHMP3Q9Y3E7 222 aa18.41■□□□□ 0.54
HDDC2-204ENST00000608295 SCN4AP35499 1836 aa18.41■□□□□ 0.54
HDDC2-204ENST00000608295 H7C1W4 665 aa18.4■□□□□ 0.54
HDDC2-204ENST00000608295 FZD9O00144 591 aa18.4■□□□□ 0.54
HDDC2-204ENST00000608295 EAPPQ56P03 285 aaPredicted RBP18.4■□□□□ 0.54
HDDC2-204ENST00000608295 ANKRD18AQ8IVF6 992 aa18.4■□□□□ 0.54
HDDC2-204ENST00000608295 UFL1O94874 794 aa18.39■□□□□ 0.53
HDDC2-204ENST00000608295 HSPA6P17066 643 aa18.39■□□□□ 0.53
HDDC2-204ENST00000608295 CASP7P55210 303 aa18.39■□□□□ 0.53
HDDC2-204ENST00000608295 HTRA3P83110 453 aa18.39■□□□□ 0.53
HDDC2-204ENST00000608295 GRIPAP1Q4V328 841 aa18.39■□□□□ 0.53
HDDC2-204ENST00000608295 TTLL11Q8NHH1 800 aa18.39■□□□□ 0.53
HDDC2-204ENST00000608295 RBM46Q8TBY0 533 aaKnown RBP18.39■□□□□ 0.53
HDDC2-204ENST00000608295 ANKIB1Q9P2G1 1089 aa18.39■□□□□ 0.53
HDDC2-204ENST00000608295 TMC4Q7Z404 712 aa18.38■□□□□ 0.53
HDDC2-204ENST00000608295 RTFDC1Q9BY42 306 aaPredicted RBP18.38■□□□□ 0.53
HDDC2-204ENST00000608295 DBNDD1Q9H9R9 158 aa18.38■□□□□ 0.53
HDDC2-204ENST00000608295 POLLQ9UGP5 575 aa18.38■□□□□ 0.53
HDDC2-204ENST00000608295 RAD17O75943 681 aa18.37■□□□□ 0.53
HDDC2-204ENST00000608295 KIAA2012Q0VF49 1180 aa18.37■□□□□ 0.53
HDDC2-204ENST00000608295 CDC5LQ99459 802 aaKnown RBP18.37■□□□□ 0.53
HDDC2-204ENST00000608295 SRCIN1Q9C0H9 1055 aa18.37■□□□□ 0.53
HDDC2-204ENST00000608295 A0A1B0GUL6 1792 aa18.37■□□□□ 0.53
HDDC2-204ENST00000608295 ITGA6P23229 1130 aa18.36■□□□□ 0.53
HDDC2-204ENST00000608295 DOK7Q18PE1 504 aa18.36■□□□□ 0.53
HDDC2-204ENST00000608295 WASHC4Q2M389 1173 aa18.36■□□□□ 0.53
HDDC2-204ENST00000608295 GPC2Q8N158 579 aa18.36■□□□□ 0.53
HDDC2-204ENST00000608295 SMC1BQ8NDV3 1235 aa18.36■□□□□ 0.53
HDDC2-204ENST00000608295 C9orf78Q9NZ63 289 aaPredicted RBP18.36■□□□□ 0.53
HDDC2-204ENST00000608295 HACL1Q9UJ83 578 aa18.36■□□□□ 0.53
HDDC2-204ENST00000608295 SCN9AQ15858 1988 aa18.35■□□□□ 0.53
HDDC2-204ENST00000608295 IQCA1LA6NCM1 817 aa18.35■□□□□ 0.53
HDDC2-204ENST00000608295 WTIPA6NIX2 430 aaPredicted RBP18.35■□□□□ 0.53
HDDC2-204ENST00000608295 GRM8O00222 908 aa18.35■□□□□ 0.53
HDDC2-204ENST00000608295 EPHA10Q5JZY3 1008 aa18.35■□□□□ 0.53
HDDC2-204ENST00000608295 TRMT2AQ8IZ69 625 aaKnown RBP18.35■□□□□ 0.53
HDDC2-204ENST00000608295 TBC1D16Q8TBP0 767 aa18.35■□□□□ 0.53
HDDC2-204ENST00000608295 L3MBTL3Q96JM7 780 aaPredicted RBP18.35■□□□□ 0.53
HDDC2-204ENST00000608295 TAF1DQ9H5J8 278 aaPredicted RBP18.35■□□□□ 0.53
HDDC2-204ENST00000608295 ZNRF3Q9ULT6 936 aa18.35■□□□□ 0.53
HDDC2-204ENST00000608295 YDJCA8MPS7 323 aa18.34■□□□□ 0.53
HDDC2-204ENST00000608295 EPHX2P34913 555 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms