RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 CLUAP1Q96AJ1 413 aa17.96■□□□□ 0.47
CTSA-219ENST00000607841 TNRC6CQ9HCJ0 1690 aaKnown RBP17.96■□□□□ 0.47
CTSA-219ENST00000607841 C21orf2O43822 256 aa17.95■□□□□ 0.46
CTSA-219ENST00000607841 NBPF7P0C2Y1 421 aaPredicted RBP17.95■□□□□ 0.46
CTSA-219ENST00000607841 CC2D2BQ6DHV5 1058 aa17.95■□□□□ 0.46
CTSA-219ENST00000607841 ARHGAP27Q6ZUM4 889 aa17.95■□□□□ 0.46
CTSA-219ENST00000607841 TMC4Q7Z404 712 aa17.95■□□□□ 0.46
CTSA-219ENST00000607841 DZIP1LQ8IYY4 767 aaKnown RBP17.95■□□□□ 0.46
CTSA-219ENST00000607841 TTLL11Q8NHH1 800 aa17.95■□□□□ 0.46
CTSA-219ENST00000607841 USP44Q9H0E7 712 aa17.95■□□□□ 0.46
CTSA-219ENST00000607841 PPEF1O14829 653 aaPredicted RBP17.94■□□□□ 0.46
CTSA-219ENST00000607841 GRIPAP1Q4V328 841 aa17.94■□□□□ 0.46
CTSA-219ENST00000607841 ZNF219Q9P2Y4 722 aaPredicted RBP17.94■□□□□ 0.46
CTSA-219ENST00000607841 COL11A2P13942 1736 aaPredicted RBP17.93■□□□□ 0.46
CTSA-219ENST00000607841 CSF1RP07333 972 aa17.93■□□□□ 0.46
CTSA-219ENST00000607841 CCDC93Q567U6 631 aa17.93■□□□□ 0.46
CTSA-219ENST00000607841 C7orf43Q8WVR3 580 aa17.93■□□□□ 0.46
CTSA-219ENST00000607841 CCDC85AQ96PX6 553 aaPredicted RBP17.93■□□□□ 0.46
CTSA-219ENST00000607841 CDC5LQ99459 802 aaKnown RBP17.93■□□□□ 0.46
CTSA-219ENST00000607841 DLEC1Q9Y238 1755 aa17.93■□□□□ 0.46
CTSA-219ENST00000607841 UTRNP46939 3433 aa17.92■□□□□ 0.46
CTSA-219ENST00000607841 GNAI3P08754 354 aa17.92■□□□□ 0.46
CTSA-219ENST00000607841 UBTFL1P0CB47 393 aaPredicted RBP17.92■□□□□ 0.46
CTSA-219ENST00000607841 RPS8P62241 208 aaKnown RBP17.92■□□□□ 0.46
CTSA-219ENST00000607841 FOXO4P98177 505 aa17.92■□□□□ 0.46
CTSA-219ENST00000607841 RTKN2Q8IZC4 609 aa17.92■□□□□ 0.46
CTSA-219ENST00000607841 TMEM57Q8N5G2 664 aa17.92■□□□□ 0.46
CTSA-219ENST00000607841 ATP6V0A2Q9Y487 856 aa17.92■□□□□ 0.46
CTSA-219ENST00000607841 RTL9Q8NET4 1388 aa17.91■□□□□ 0.46
CTSA-219ENST00000607841 ANKRD18AQ8IVF6 992 aa17.91■□□□□ 0.46
CTSA-219ENST00000607841 SP8Q8IXZ3 490 aa17.91■□□□□ 0.46
CTSA-219ENST00000607841 CELF1Q92879 486 aaKnown RBP17.91■□□□□ 0.46
CTSA-219ENST00000607841 SUCLG2Q96I99 432 aa17.91■□□□□ 0.46
CTSA-219ENST00000607841 GREM2Q9H772 168 aa17.91■□□□□ 0.46
CTSA-219ENST00000607841 TNNQ9UQP3 1299 aa17.91■□□□□ 0.46
CTSA-219ENST00000607841 DDX60Q8IY21 1712 aaKnown RBP17.9■□□□□ 0.46
CTSA-219ENST00000607841 IFIT5Q13325 482 aaKnown RBP17.9■□□□□ 0.46
CTSA-219ENST00000607841 LMBR1LQ6UX01 489 aa17.9■□□□□ 0.46
CTSA-219ENST00000607841 SEC31BQ9NQW1 1179 aa17.9■□□□□ 0.46
CTSA-219ENST00000607841 CHMP3Q9Y3E7 222 aa17.9■□□□□ 0.46
CTSA-219ENST00000607841 BRCA1P38398 1863 aaKnown RBP17.9■□□□□ 0.46
CTSA-219ENST00000607841 ANKRD18BA2A2Z9 1011 aa17.89■□□□□ 0.45
CTSA-219ENST00000607841 ITGA6P23229 1130 aa17.89■□□□□ 0.45
CTSA-219ENST00000607841 IGHMBP2P38935 993 aaKnown RBP17.89■□□□□ 0.45
CTSA-219ENST00000607841 CCDC57Q2TAC2 916 aa17.89■□□□□ 0.45
CTSA-219ENST00000607841 FAM161AQ3B820 660 aa17.89■□□□□ 0.45
CTSA-219ENST00000607841 ITPRIPQ8IWB1 547 aa17.89■□□□□ 0.45
CTSA-219ENST00000607841 LAMB2P55268 1798 aa17.89■□□□□ 0.45
CTSA-219ENST00000607841 GOLGB1Q14789 3259 aaKnown RBP17.89■□□□□ 0.45
CTSA-219ENST00000607841 RABL6Q3YEC7 729 aaPredicted RBP17.88■□□□□ 0.45
CTSA-219ENST00000607841 EPHA10Q5JZY3 1008 aa17.88■□□□□ 0.45
CTSA-219ENST00000607841 KAZALD1Q96I82 304 aa17.88■□□□□ 0.45
CTSA-219ENST00000607841 MEIS3Q99687 375 aa17.88■□□□□ 0.45
CTSA-219ENST00000607841 TAOK3Q9H2K8 898 aa17.88■□□□□ 0.45
CTSA-219ENST00000607841 BICC1Q9H694 974 aaKnown RBP17.88■□□□□ 0.45
CTSA-219ENST00000607841 PLIN1O60240 522 aa17.87■□□□□ 0.45
CTSA-219ENST00000607841 RLBP1P12271 317 aa17.87■□□□□ 0.45
CTSA-219ENST00000607841 PDE3AQ14432 1141 aa17.87■□□□□ 0.45
CTSA-219ENST00000607841 TAF7LQ5H9L4 462 aa17.87■□□□□ 0.45
CTSA-219ENST00000607841 MPHOSPH8Q99549 860 aa17.87■□□□□ 0.45
CTSA-219ENST00000607841 LTBP3Q9NS15 1303 aa17.87■□□□□ 0.45
CTSA-219ENST00000607841 NFKBIEO00221 500 aa17.86■□□□□ 0.45
CTSA-219ENST00000607841 FKBP4Q02790 459 aaKnown RBP eCLIP17.86■□□□□ 0.45
CTSA-219ENST00000607841 OLFM4Q6UX06 510 aa17.86■□□□□ 0.45
CTSA-219ENST00000607841 PANK1Q8TE04 598 aa17.86■□□□□ 0.45
CTSA-219ENST00000607841 PSMD1Q99460 953 aa17.86■□□□□ 0.45
CTSA-219ENST00000607841 CHMP4BQ9H444 224 aaKnown RBP17.86■□□□□ 0.45
CTSA-219ENST00000607841 BSDC1Q9NW68 430 aaPredicted RBP17.86■□□□□ 0.45
CTSA-219ENST00000607841 SLX4Q8IY92 1834 aa17.86■□□□□ 0.45
CTSA-219ENST00000607841 ARFGEF1Q9Y6D6 1849 aa17.86■□□□□ 0.45
CTSA-219ENST00000607841 GNAI2P04899 355 aa17.85■□□□□ 0.45
CTSA-219ENST00000607841 LMNB1P20700 586 aa17.85■□□□□ 0.45
CTSA-219ENST00000607841 DPP8Q6V1X1 898 aaPredicted RBP17.85■□□□□ 0.45
CTSA-219ENST00000607841 MPNDQ8N594 471 aa17.85■□□□□ 0.45
CTSA-219ENST00000607841 ANKRD44Q8N8A2 993 aa17.85■□□□□ 0.45
CTSA-219ENST00000607841 SUPT20HQ8NEM7 779 aa17.85■□□□□ 0.45
CTSA-219ENST00000607841 LRRFIP2Q9Y608 721 aaKnown RBP17.85■□□□□ 0.45
CTSA-219ENST00000607841 RASSF7Q02833 373 aa17.84■□□□□ 0.45
CTSA-219ENST00000607841 MVPQ14764 893 aaKnown RBP17.84■□□□□ 0.45
CTSA-219ENST00000607841 DDX19BQ9UMR2 479 aa17.84■□□□□ 0.45
CTSA-219ENST00000607841 NSFL1CQ9UNZ2 370 aaKnown RBP17.84■□□□□ 0.45
CTSA-219ENST00000607841 ZBTB7BO15156 539 aaPredicted RBP17.83■□□□□ 0.44
CTSA-219ENST00000607841 RRP1P56182 461 aaKnown RBP17.82■□□□□ 0.44
CTSA-219ENST00000607841 C9orf131Q5VYM1 1079 aa17.82■□□□□ 0.44
CTSA-219ENST00000607841 LDHAL6AQ6ZMR3 332 aa17.82■□□□□ 0.44
CTSA-219ENST00000607841 RTFDC1Q9BY42 306 aaPredicted RBP17.82■□□□□ 0.44
CTSA-219ENST00000607841 VPS33BQ9H267 617 aa17.82■□□□□ 0.44
CTSA-219ENST00000607841 RNF181Q9P0P0 153 aa17.82■□□□□ 0.44
CTSA-219ENST00000607841 ANKIB1Q9P2G1 1089 aa17.82■□□□□ 0.44
CTSA-219ENST00000607841 COG6Q9Y2V7 657 aa17.82■□□□□ 0.44
CTSA-219ENST00000607841 GPSM2P81274 684 aa17.81■□□□□ 0.44
CTSA-219ENST00000607841 ANKRD2Q9GZV1 360 aa17.81■□□□□ 0.44
CTSA-219ENST00000607841 PODXL2Q9NZ53 605 aa17.81■□□□□ 0.44
CTSA-219ENST00000607841 MINPP1Q9UNW1 487 aa17.81■□□□□ 0.44
CTSA-219ENST00000607841 SNED1Q8TER0 1413 aa17.81■□□□□ 0.44
CTSA-219ENST00000607841 IARSP41252 1262 aaKnown RBP17.8■□□□□ 0.44
CTSA-219ENST00000607841 EYA3Q99504 573 aa17.8■□□□□ 0.44
CTSA-219ENST00000607841 ZNF277Q9NRM2 450 aaPredicted RBP17.8■□□□□ 0.44
CTSA-219ENST00000607841 CNNM1Q9NRU3 951 aa17.8■□□□□ 0.44
CTSA-219ENST00000607841 XDHP47989 1333 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms