RNA–Protein interactions for RNA: ENST00000607559.1

TPM2-208, Transcript of tropomyosin 2, human

TSL 2

Gene TPM2, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM2-208	ENST00000607559	ATP6V0A2	Q9Y487	856 aa		13.87	□□□□□ -0.19
TPM2-208	ENST00000607559	SH3TC1	Q8TE82	1336 aa		13.87	□□□□□ -0.19
TPM2-208	ENST00000607559	DICER1	Q9UPY3	1922 aa	Known RBP	13.86	□□□□□ -0.19
TPM2-208	ENST00000607559	PCNT	O95613	3336 aa		13.86	□□□□□ -0.19
TPM2-208	ENST00000607559	SF3B3	Q15393	1217 aa	Known RBP	13.86	□□□□□ -0.19
TPM2-208	ENST00000607559	OLFM4	Q6UX06	510 aa		13.86	□□□□□ -0.19
TPM2-208	ENST00000607559	KLRG1	Q96E93	195 aa		13.86	□□□□□ -0.19
TPM2-208	ENST00000607559	WDR90	Q96KV7	1748 aa		13.85	□□□□□ -0.19
TPM2-208	ENST00000607559	C19orf67	A6NJJ6	358 aa		13.85	□□□□□ -0.19
TPM2-208	ENST00000607559	IARS	P41252	1262 aa	Known RBP	13.85	□□□□□ -0.19
TPM2-208	ENST00000607559	EVX2	Q03828	476 aa		13.85	□□□□□ -0.19
TPM2-208	ENST00000607559	TMC4	Q7Z404	712 aa		13.85	□□□□□ -0.19
TPM2-208	ENST00000607559	SP8	Q8IXZ3	490 aa		13.85	□□□□□ -0.19
TPM2-208	ENST00000607559	TSPYL6	Q8N831	410 aa		13.85	□□□□□ -0.19
TPM2-208	ENST00000607559	PHAX	Q9H814	394 aa	Known RBP	13.85	□□□□□ -0.19
TPM2-208	ENST00000607559	TIAM2	Q8IVF5	1701 aa		13.84	□□□□□ -0.19
TPM2-208	ENST00000607559	ELL2	O00472	640 aa	Predicted RBP	13.84	□□□□□ -0.19
TPM2-208	ENST00000607559	HCLS1	P14317	486 aa	Predicted RBP	13.84	□□□□□ -0.19
TPM2-208	ENST00000607559	CCDC191	Q8NCU4	936 aa		13.84	□□□□□ -0.19
TPM2-208	ENST00000607559	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.84	□□□□□ -0.19
TPM2-208	ENST00000607559	PPEF1	O14829	653 aa	Predicted RBP	13.83	□□□□□ -0.2
TPM2-208	ENST00000607559	DDN	O94850	711 aa	Predicted RBP	13.83	□□□□□ -0.2
TPM2-208	ENST00000607559	JMY	Q8N9B5	988 aa		13.83	□□□□□ -0.2
TPM2-208	ENST00000607559	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.83	□□□□□ -0.2
TPM2-208	ENST00000607559	METTL22	Q9BUU2	404 aa	Predicted RBP	13.83	□□□□□ -0.2
TPM2-208	ENST00000607559	ABCC4	O15439	1325 aa		13.83	□□□□□ -0.2
TPM2-208	ENST00000607559	HSP90B1	P14625	803 aa	Known RBP	13.82	□□□□□ -0.2
TPM2-208	ENST00000607559	GOLGA2	Q08379	1002 aa		13.82	□□□□□ -0.2
TPM2-208	ENST00000607559	GRAP	Q13588	217 aa		13.82	□□□□□ -0.2
TPM2-208	ENST00000607559	DDX46	Q7L014	1031 aa	Known RBP	13.82	□□□□□ -0.2
TPM2-208	ENST00000607559	RIC3	Q7Z5B4	369 aa		13.82	□□□□□ -0.2
TPM2-208	ENST00000607559	GRAPL	Q8TC17	118 aa	Predicted RBP	13.82	□□□□□ -0.2
TPM2-208	ENST00000607559	FAM89A	Q96GI7	184 aa		13.82	□□□□□ -0.2
TPM2-208	ENST00000607559	IQCA1L	A6NCM1	817 aa		13.81	□□□□□ -0.2
TPM2-208	ENST00000607559	ATP5J2-PTCD1	G3V325	749 aa		13.81	□□□□□ -0.2
TPM2-208	ENST00000607559	DDX58	O95786	925 aa	Known RBP	13.81	□□□□□ -0.2
TPM2-208	ENST00000607559	PCCA	P05165	728 aa	Predicted RBP	13.81	□□□□□ -0.2
TPM2-208	ENST00000607559	CD44	P16070	742 aa	Known RBP	13.81	□□□□□ -0.2
TPM2-208	ENST00000607559	HTRA3	P83110	453 aa		13.81	□□□□□ -0.2
TPM2-208	ENST00000607559	KSR2	Q6VAB6	950 aa		13.81	□□□□□ -0.2
TPM2-208	ENST00000607559	GPC2	Q8N158	579 aa		13.81	□□□□□ -0.2
TPM2-208	ENST00000607559	JDP2	Q8WYK2	163 aa		13.81	□□□□□ -0.2
TPM2-208	ENST00000607559	TSR2	Q969E8	191 aa	Known RBP	13.81	□□□□□ -0.2
TPM2-208	ENST00000607559	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.81	□□□□□ -0.2
TPM2-208	ENST00000607559	ANKRD36C	Q5JPF3	1778 aa		13.81	□□□□□ -0.2
TPM2-208	ENST00000607559	VAMP4	O75379	141 aa		13.8	□□□□□ -0.2
TPM2-208	ENST00000607559	TWISTNB	Q3B726	338 aa	Predicted RBP	13.8	□□□□□ -0.2
TPM2-208	ENST00000607559	SUPT20H	Q8NEM7	779 aa		13.8	□□□□□ -0.2
TPM2-208	ENST00000607559	CACNA1S	Q13698	1873 aa		13.8	□□□□□ -0.2
TPM2-208	ENST00000607559	IRS4	O14654	1257 aa	Predicted RBP	13.79	□□□□□ -0.2
TPM2-208	ENST00000607559	TMX4	Q9H1E5	349 aa	Predicted RBP	13.79	□□□□□ -0.2
TPM2-208	ENST00000607559	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.79	□□□□□ -0.2
TPM2-208	ENST00000607559	ZNF521	Q96K83	1311 aa		13.79	□□□□□ -0.2
TPM2-208	ENST00000607559	PI4KAP2	A4QPH2	592 aa		13.78	□□□□□ -0.2
TPM2-208	ENST00000607559	IGKV5-2	P06315	115 aa		13.78	□□□□□ -0.2
TPM2-208	ENST00000607559	KIAA2012	Q0VF49	1180 aa		13.78	□□□□□ -0.2
TPM2-208	ENST00000607559	PI4KAP1	Q8N8J0	262 aa		13.78	□□□□□ -0.2
TPM2-208	ENST00000607559	STK31	Q9BXU1	1019 aa		13.78	□□□□□ -0.2
TPM2-208	ENST00000607559	CWC25	Q9NXE8	425 aa	Predicted RBP	13.78	□□□□□ -0.2
TPM2-208	ENST00000607559	CDHR2	Q9BYE9	1310 aa		13.78	□□□□□ -0.2
TPM2-208	ENST00000607559	ZNF541	Q9H0D2	1346 aa		13.78	□□□□□ -0.2
TPM2-208	ENST00000607559	FANCI	Q9NVI1	1328 aa		13.78	□□□□□ -0.2
TPM2-208	ENST00000607559	COL4A5	P29400	1685 aa		13.77	□□□□□ -0.21
TPM2-208	ENST00000607559	RPS8	P62241	208 aa	Known RBP	13.77	□□□□□ -0.21
TPM2-208	ENST00000607559	SLC51A	Q86UW1	340 aa		13.77	□□□□□ -0.21
TPM2-208	ENST00000607559	PNMA8A	Q86V59	439 aa	Predicted RBP	13.77	□□□□□ -0.21
TPM2-208	ENST00000607559	LDHD	Q86WU2	507 aa		13.77	□□□□□ -0.21
TPM2-208	ENST00000607559	LARGE2	Q8N3Y3	721 aa		13.77	□□□□□ -0.21
TPM2-208	ENST00000607559	MPND	Q8N594	471 aa		13.77	□□□□□ -0.21
TPM2-208	ENST00000607559	MYD88	Q99836	296 aa		13.77	□□□□□ -0.21
TPM2-208	ENST00000607559	HACL1	Q9UJ83	578 aa		13.77	□□□□□ -0.21
TPM2-208	ENST00000607559	MAP3K2	Q9Y2U5	619 aa		13.77	□□□□□ -0.21
TPM2-208	ENST00000607559	PDE8A	O60658	829 aa		13.76	□□□□□ -0.21
TPM2-208	ENST00000607559	EIF6	P56537	245 aa	Known RBP	13.76	□□□□□ -0.21
TPM2-208	ENST00000607559	DPP8	Q6V1X1	898 aa	Predicted RBP	13.76	□□□□□ -0.21
TPM2-208	ENST00000607559	CELF1	Q92879	486 aa	Known RBP	13.76	□□□□□ -0.21
TPM2-208	ENST00000607559	PODXL2	Q9NZ53	605 aa		13.76	□□□□□ -0.21
TPM2-208	ENST00000607559	ZNRF3	Q9ULT6	936 aa		13.76	□□□□□ -0.21
TPM2-208	ENST00000607559	SCN4A	P35499	1836 aa		13.76	□□□□□ -0.21
TPM2-208	ENST00000607559		H7C1W4	665 aa		13.75	□□□□□ -0.21
TPM2-208	ENST00000607559	ITGBL1	O95965	494 aa	Predicted RBP	13.75	□□□□□ -0.21
TPM2-208	ENST00000607559	G2E3	Q7L622	706 aa		13.75	□□□□□ -0.21
TPM2-208	ENST00000607559	RTL9	Q8NET4	1388 aa		13.74	□□□□□ -0.21
TPM2-208	ENST00000607559	PASK	Q96RG2	1323 aa		13.74	□□□□□ -0.21
TPM2-208	ENST00000607559	NEURL1B	A8MQ27	555 aa		13.74	□□□□□ -0.21
TPM2-208	ENST00000607559	TCERG1	O14776	1098 aa	Known RBP	13.74	□□□□□ -0.21
TPM2-208	ENST00000607559	PPIP5K2	O43314	1243 aa		13.74	□□□□□ -0.21
TPM2-208	ENST00000607559	POTEI	P0CG38	1075 aa		13.74	□□□□□ -0.21
TPM2-208	ENST00000607559	POTEJ	P0CG39	1038 aa		13.74	□□□□□ -0.21
TPM2-208	ENST00000607559	EPHX2	P34913	555 aa		13.74	□□□□□ -0.21
TPM2-208	ENST00000607559	SCNN1D	P51172	638 aa		13.74	□□□□□ -0.21
TPM2-208	ENST00000607559	EXOSC9	Q06265	439 aa	Known RBP	13.74	□□□□□ -0.21
TPM2-208	ENST00000607559	CXCL9	Q07325	125 aa		13.74	□□□□□ -0.21
TPM2-208	ENST00000607559	NEXN	Q0ZGT2	675 aa		13.74	□□□□□ -0.21
TPM2-208	ENST00000607559	FLII	Q13045	1269 aa		13.74	□□□□□ -0.21
TPM2-208	ENST00000607559	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.74	□□□□□ -0.21
TPM2-208	ENST00000607559	NIM1K	Q8IY84	436 aa		13.74	□□□□□ -0.21
TPM2-208	ENST00000607559	FAM9B	Q8IZU0	186 aa		13.74	□□□□□ -0.21
TPM2-208	ENST00000607559	PLA2G12B	Q9BX93	195 aa		13.74	□□□□□ -0.21
TPM2-208	ENST00000607559	MYH16	Q9H6N6	1097 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms