RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 GRAPLQ8TC17 118 aaPredicted RBP19.35■□□□□ 0.69
CTSA-216ENST00000607212 VPS33BQ9H267 617 aa19.35■□□□□ 0.69
CTSA-216ENST00000607212 ADARB2Q9NS39 739 aaKnown RBP19.35■□□□□ 0.69
CTSA-216ENST00000607212 PCNTO95613 3336 aa19.35■□□□□ 0.69
CTSA-216ENST00000607212 TRAF5O00463 557 aa19.34■□□□□ 0.69
CTSA-216ENST00000607212 RAD17O75943 681 aa19.34■□□□□ 0.69
CTSA-216ENST00000607212 LBX1P52954 281 aa19.34■□□□□ 0.69
CTSA-216ENST00000607212 MAP2K1Q02750 393 aaPredicted RBP19.34■□□□□ 0.69
CTSA-216ENST00000607212 FMR1Q06787 632 aaKnown RBP eCLIP19.34■□□□□ 0.69
CTSA-216ENST00000607212 CXCL9Q07325 125 aa19.34■□□□□ 0.69
CTSA-216ENST00000607212 BEGAINQ9BUH8 593 aa19.34■□□□□ 0.69
CTSA-216ENST00000607212 PRDM10Q9NQV6 1147 aa19.34■□□□□ 0.69
CTSA-216ENST00000607212 GPRC5DQ9NZD1 345 aa19.34■□□□□ 0.69
CTSA-216ENST00000607212 CHL1O00533 1208 aa19.33■□□□□ 0.68
CTSA-216ENST00000607212 ECE1P42892 770 aa19.33■□□□□ 0.68
CTSA-216ENST00000607212 GMPSP49915 693 aaPredicted RBP19.33■□□□□ 0.68
CTSA-216ENST00000607212 TNIP1Q15025 636 aa19.33■□□□□ 0.68
CTSA-216ENST00000607212 WBP1LQ9NX94 342 aa19.33■□□□□ 0.68
CTSA-216ENST00000607212 ATP5J2-PTCD1G3V325 749 aa19.32■□□□□ 0.68
CTSA-216ENST00000607212 RTL5Q5HYW3 569 aaPredicted RBP19.32■□□□□ 0.68
CTSA-216ENST00000607212 ANKRD13DQ6ZTN6 518 aa19.32■□□□□ 0.68
CTSA-216ENST00000607212 PLBD2Q8NHP8 589 aa19.32■□□□□ 0.68
CTSA-216ENST00000607212 CAPNS2Q96L46 248 aa19.32■□□□□ 0.68
CTSA-216ENST00000607212 ZNF408Q9H9D4 720 aa19.32■□□□□ 0.68
CTSA-216ENST00000607212 KIAA2012Q0VF49 1180 aa19.31■□□□□ 0.68
CTSA-216ENST00000607212 CYP4F22Q6NT55 531 aa19.31■□□□□ 0.68
CTSA-216ENST00000607212 TMC4Q7Z404 712 aa19.31■□□□□ 0.68
CTSA-216ENST00000607212 FAM89AQ96GI7 184 aa19.31■□□□□ 0.68
CTSA-216ENST00000607212 RTFDC1Q9BY42 306 aaPredicted RBP19.31■□□□□ 0.68
CTSA-216ENST00000607212 DBF4Q9UBU7 674 aaPredicted RBP19.31■□□□□ 0.68
CTSA-216ENST00000607212 TRIM35Q9UPQ4 493 aa19.31■□□□□ 0.68
CTSA-216ENST00000607212 CELF2O95319 508 aaKnown RBP19.3■□□□□ 0.68
CTSA-216ENST00000607212 ADAMTS8Q9UP79 889 aa19.3■□□□□ 0.68
CTSA-216ENST00000607212 DDX60Q8IY21 1712 aaKnown RBP19.3■□□□□ 0.68
CTSA-216ENST00000607212 C6orf229H3BNL8 230 aa19.29■□□□□ 0.68
CTSA-216ENST00000607212 RIMBP2O15034 1052 aa19.29■□□□□ 0.68
CTSA-216ENST00000607212 DUSP27Q5VZP5 1158 aa19.29■□□□□ 0.68
CTSA-216ENST00000607212 HYPKQ9NX55 129 aa19.29■□□□□ 0.68
CTSA-216ENST00000607212 NSFL1CQ9UNZ2 370 aaKnown RBP19.29■□□□□ 0.68
CTSA-216ENST00000607212 H7C1D1 291 aa19.28■□□□□ 0.68
CTSA-216ENST00000607212 HOXB7P09629 217 aa19.28■□□□□ 0.68
CTSA-216ENST00000607212 HSPA8P11142 646 aaKnown RBP19.28■□□□□ 0.68
CTSA-216ENST00000607212 GOLGA2Q08379 1002 aa19.28■□□□□ 0.68
CTSA-216ENST00000607212 WASHC4Q2M389 1173 aa19.28■□□□□ 0.68
CTSA-216ENST00000607212 RIC3Q7Z5B4 369 aa19.28■□□□□ 0.68
CTSA-216ENST00000607212 GPR101Q96P66 508 aaPredicted RBP19.28■□□□□ 0.68
CTSA-216ENST00000607212 GLIS2Q9BZE0 524 aaPredicted RBP19.28■□□□□ 0.68
CTSA-216ENST00000607212 G3V3G9 751 aa19.27■□□□□ 0.68
CTSA-216ENST00000607212 DCAF8Q5TAQ9 597 aa19.27■□□□□ 0.68
CTSA-216ENST00000607212 DBNDD1Q9H9R9 158 aa19.27■□□□□ 0.68
CTSA-216ENST00000607212 CNOT7Q9UIV1 285 aaKnown RBP19.27■□□□□ 0.68
CTSA-216ENST00000607212 TLL2Q9Y6L7 1015 aa19.27■□□□□ 0.68
CTSA-216ENST00000607212 CDHR2Q9BYE9 1310 aa19.26■□□□□ 0.67
CTSA-216ENST00000607212 IRS4O14654 1257 aaPredicted RBP19.26■□□□□ 0.67
CTSA-216ENST00000607212 CST9Q5W186 159 aa19.26■□□□□ 0.67
CTSA-216ENST00000607212 CELF1Q92879 486 aaKnown RBP19.26■□□□□ 0.67
CTSA-216ENST00000607212 CFAP44Q96MT7 982 aa19.26■□□□□ 0.67
CTSA-216ENST00000607212 EYA3Q99504 573 aa19.26■□□□□ 0.67
CTSA-216ENST00000607212 ISCA1Q9BUE6 129 aa19.26■□□□□ 0.67
CTSA-216ENST00000607212 MBIPQ9NS73 344 aa19.26■□□□□ 0.67
CTSA-216ENST00000607212 ELL2O00472 640 aaPredicted RBP19.25■□□□□ 0.67
CTSA-216ENST00000607212 MICALL2Q8IY33 904 aa19.25■□□□□ 0.67
CTSA-216ENST00000607212 TRPM4Q8TD43 1214 aa19.25■□□□□ 0.67
CTSA-216ENST00000607212 ZBTB12Q9Y330 459 aaPredicted RBP19.25■□□□□ 0.67
CTSA-216ENST00000607212 YDJCA8MPS7 323 aa19.24■□□□□ 0.67
CTSA-216ENST00000607212 AOC2O75106 756 aa19.24■□□□□ 0.67
CTSA-216ENST00000607212 CALD1Q05682 793 aaKnown RBP19.24■□□□□ 0.67
CTSA-216ENST00000607212 LRRC37AA6NMS7 1700 aa19.24■□□□□ 0.67
CTSA-216ENST00000607212 SHTN1A0MZ66 631 aa19.23■□□□□ 0.67
CTSA-216ENST00000607212 PSMD14O00487 310 aa19.23■□□□□ 0.67
CTSA-216ENST00000607212 GPSM2P81274 684 aa19.23■□□□□ 0.67
CTSA-216ENST00000607212 SF3B3Q15393 1217 aaKnown RBP19.23■□□□□ 0.67
CTSA-216ENST00000607212 DOK7Q18PE1 504 aa19.23■□□□□ 0.67
CTSA-216ENST00000607212 RBM26Q5T8P6 1007 aaKnown RBP19.23■□□□□ 0.67
CTSA-216ENST00000607212 CDC37L1Q7L3B6 337 aa19.23■□□□□ 0.67
CTSA-216ENST00000607212 MYD88Q99836 296 aa19.23■□□□□ 0.67
CTSA-216ENST00000607212 DUOX1Q9NRD9 1551 aa19.23■□□□□ 0.67
CTSA-216ENST00000607212 ECE2O60344 883 aa19.22■□□□□ 0.67
CTSA-216ENST00000607212 HSP90B1P14625 803 aaKnown RBP19.22■□□□□ 0.67
CTSA-216ENST00000607212 USP48Q86UV5 1035 aa19.22■□□□□ 0.67
CTSA-216ENST00000607212 ZC3H15Q8WU90 426 aaKnown RBP19.22■□□□□ 0.67
CTSA-216ENST00000607212 TSKSQ9UJT2 592 aa19.22■□□□□ 0.67
CTSA-216ENST00000607212 APAF1O14727 1248 aa19.21■□□□□ 0.67
CTSA-216ENST00000607212 HIRAP54198 1017 aaPredicted RBP19.21■□□□□ 0.67
CTSA-216ENST00000607212 RPS8P62241 208 aaKnown RBP19.21■□□□□ 0.67
CTSA-216ENST00000607212 GNAI1P63096 354 aa19.21■□□□□ 0.67
CTSA-216ENST00000607212 TBC1D10BQ4KMP7 808 aaPredicted RBP19.21■□□□□ 0.67
CTSA-216ENST00000607212 SAMD7Q7Z3H4 446 aa19.21■□□□□ 0.67
CTSA-216ENST00000607212 CCDC85AQ96PX6 553 aaPredicted RBP19.21■□□□□ 0.67
CTSA-216ENST00000607212 PHAXQ9H814 394 aaKnown RBP19.21■□□□□ 0.67
CTSA-216ENST00000607212 ANKIB1Q9P2G1 1089 aa19.21■□□□□ 0.67
CTSA-216ENST00000607212 THSD7BQ9C0I4 1608 aa19.21■□□□□ 0.67
CTSA-216ENST00000607212 MAP2K2P36507 400 aa19.2■□□□□ 0.66
CTSA-216ENST00000607212 SAPCD2Q86UD0 394 aa19.2■□□□□ 0.66
CTSA-216ENST00000607212 ZC3H12CQ9C0D7 883 aaKnown RBP19.2■□□□□ 0.66
CTSA-216ENST00000607212 IFT57Q9NWB7 429 aa19.2■□□□□ 0.66
CTSA-216ENST00000607212 POLLQ9UGP5 575 aa19.2■□□□□ 0.66
CTSA-216ENST00000607212 UFL1O94874 794 aa19.19■□□□□ 0.66
CTSA-216ENST00000607212 DDX58O95786 925 aaKnown RBP19.19■□□□□ 0.66
CTSA-216ENST00000607212 ZBTB38Q8NAP3 1195 aaPredicted RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms