RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 PPIP5K2O43314 1243 aa18.41■□□□□ 0.54
PKNOX1-210ENST00000607049 FKBP5Q13451 457 aaPredicted RBP18.41■□□□□ 0.54
PKNOX1-210ENST00000607049 CCDC152Q4G0S7 254 aa18.41■□□□□ 0.54
PKNOX1-210ENST00000607049 NIM1KQ8IY84 436 aa18.41■□□□□ 0.54
PKNOX1-210ENST00000607049 CCDC88AQ3V6T2 1871 aa18.4■□□□□ 0.54
PKNOX1-210ENST00000607049 FZD9O00144 591 aa18.4■□□□□ 0.54
PKNOX1-210ENST00000607049 PDE8AO60658 829 aa18.4■□□□□ 0.54
PKNOX1-210ENST00000607049 VAMP4O75379 141 aa18.4■□□□□ 0.54
PKNOX1-210ENST00000607049 FLIIQ13045 1269 aa18.4■□□□□ 0.54
PKNOX1-210ENST00000607049 GPC2Q8N158 579 aa18.4■□□□□ 0.54
PKNOX1-210ENST00000607049 L3MBTL3Q96JM7 780 aaPredicted RBP18.39■□□□□ 0.53
PKNOX1-210ENST00000607049 DICER1Q9UPY3 1922 aaKnown RBP18.39■□□□□ 0.53
PKNOX1-210ENST00000607049 CCER2I3L3R5 266 aa18.38■□□□□ 0.53
PKNOX1-210ENST00000607049 LMOD1P29536 600 aaPredicted RBP18.37■□□□□ 0.53
PKNOX1-210ENST00000607049 RPS8P62241 208 aaKnown RBP18.37■□□□□ 0.53
PKNOX1-210ENST00000607049 RTFDC1Q9BY42 306 aaPredicted RBP18.37■□□□□ 0.53
PKNOX1-210ENST00000607049 HACL1Q9UJ83 578 aa18.37■□□□□ 0.53
PKNOX1-210ENST00000607049 GJA3Q9Y6H8 435 aa18.37■□□□□ 0.53
PKNOX1-210ENST00000607049 ZNF541Q9H0D2 1346 aa18.37■□□□□ 0.53
PKNOX1-210ENST00000607049 AOC3Q16853 763 aa18.36■□□□□ 0.53
PKNOX1-210ENST00000607049 G2E3Q7L622 706 aa18.36■□□□□ 0.53
PKNOX1-210ENST00000607049 PNMA8AQ86V59 439 aaPredicted RBP18.36■□□□□ 0.53
PKNOX1-210ENST00000607049 SNED1Q8TER0 1413 aa18.36■□□□□ 0.53
PKNOX1-210ENST00000607049 DNAAF4Q8WXU2 420 aa18.36■□□□□ 0.53
PKNOX1-210ENST00000607049 WDR90Q96KV7 1748 aa18.36■□□□□ 0.53
PKNOX1-210ENST00000607049 CDHR2Q9BYE9 1310 aa18.36■□□□□ 0.53
PKNOX1-210ENST00000607049 NSFL1CQ9UNZ2 370 aaKnown RBP18.36■□□□□ 0.53
PKNOX1-210ENST00000607049 NEURL1BA8MQ27 555 aa18.35■□□□□ 0.53
PKNOX1-210ENST00000607049 POTECB2RU33 542 aa18.35■□□□□ 0.53
PKNOX1-210ENST00000607049 E9PSI1 815 aa18.35■□□□□ 0.53
PKNOX1-210ENST00000607049 CELF1Q92879 486 aaKnown RBP18.35■□□□□ 0.53
PKNOX1-210ENST00000607049 CDC5LQ99459 802 aaKnown RBP18.35■□□□□ 0.53
PKNOX1-210ENST00000607049 EYA3Q99504 573 aa18.35■□□□□ 0.53
PKNOX1-210ENST00000607049 ZNRF3Q9ULT6 936 aa18.35■□□□□ 0.53
PKNOX1-210ENST00000607049 C6orf229H3BNL8 230 aa18.34■□□□□ 0.53
PKNOX1-210ENST00000607049 IGKV5-2P06315 115 aa18.34■□□□□ 0.53
PKNOX1-210ENST00000607049 KIAA2012Q0VF49 1180 aa18.34■□□□□ 0.53
PKNOX1-210ENST00000607049 CHADLQ6NUI6 762 aa18.34■□□□□ 0.53
PKNOX1-210ENST00000607049 ANKRD18AQ8IVF6 992 aa18.34■□□□□ 0.53
PKNOX1-210ENST00000607049 LINS1Q8NG48 757 aa18.34■□□□□ 0.53
PKNOX1-210ENST00000607049 TAF1DQ9H5J8 278 aaPredicted RBP18.34■□□□□ 0.53
PKNOX1-210ENST00000607049 SPINK5Q9NQ38 1064 aaPredicted RBP18.34■□□□□ 0.53
PKNOX1-210ENST00000607049 EPHX2P34913 555 aa18.33■□□□□ 0.52
PKNOX1-210ENST00000607049 TNIP1Q15025 636 aa18.33■□□□□ 0.52
PKNOX1-210ENST00000607049 WASHC4Q2M389 1173 aa18.33■□□□□ 0.52
PKNOX1-210ENST00000607049 CWF19L2Q2TBE0 894 aaKnown RBP18.33■□□□□ 0.52
PKNOX1-210ENST00000607049 EAPPQ56P03 285 aaPredicted RBP18.33■□□□□ 0.52
PKNOX1-210ENST00000607049 LDHDQ86WU2 507 aa18.33■□□□□ 0.52
PKNOX1-210ENST00000607049 JARID2Q92833 1246 aaPredicted RBP18.33■□□□□ 0.52
PKNOX1-210ENST00000607049 ANKIB1Q9P2G1 1089 aa18.33■□□□□ 0.52
PKNOX1-210ENST00000607049 CLEC11AQ9Y240 323 aa18.33■□□□□ 0.52
PKNOX1-210ENST00000607049 G3V3G9 751 aa18.32■□□□□ 0.52
PKNOX1-210ENST00000607049 CTSWP56202 376 aa18.32■□□□□ 0.52
PKNOX1-210ENST00000607049 GCKRQ14397 625 aa18.32■□□□□ 0.52
PKNOX1-210ENST00000607049 DCAF8Q5TAQ9 597 aa18.32■□□□□ 0.52
PKNOX1-210ENST00000607049 UBE3BQ7Z3V4 1068 aa18.32■□□□□ 0.52
PKNOX1-210ENST00000607049 ZNF521Q96K83 1311 aa18.31■□□□□ 0.52
PKNOX1-210ENST00000607049 CCDC85AQ96PX6 553 aaPredicted RBP18.31■□□□□ 0.52
PKNOX1-210ENST00000607049 H7C1W4 665 aa18.3■□□□□ 0.52
PKNOX1-210ENST00000607049 ZC3H12CQ9C0D7 883 aaKnown RBP18.3■□□□□ 0.52
PKNOX1-210ENST00000607049 SEC31BQ9NQW1 1179 aa18.3■□□□□ 0.52
PKNOX1-210ENST00000607049 LAMB2P55268 1798 aa18.3■□□□□ 0.52
PKNOX1-210ENST00000607049 DDX60Q8IY21 1712 aaKnown RBP18.29■□□□□ 0.52
PKNOX1-210ENST00000607049 GPSM2P81274 684 aa18.29■□□□□ 0.52
PKNOX1-210ENST00000607049 CIAPIN1Q6FI81 312 aa18.29■□□□□ 0.52
PKNOX1-210ENST00000607049 BCL2L13Q9BXK5 485 aa18.29■□□□□ 0.52
PKNOX1-210ENST00000607049 GGA1Q9UJY5 639 aa18.29■□□□□ 0.52
PKNOX1-210ENST00000607049 IGHMBP2P38935 993 aaKnown RBP18.28■□□□□ 0.52
PKNOX1-210ENST00000607049 SLC51AQ86UW1 340 aa18.28■□□□□ 0.52
PKNOX1-210ENST00000607049 TTLL11Q8NHH1 800 aa18.28■□□□□ 0.52
PKNOX1-210ENST00000607049 PODXL2Q9NZ53 605 aa18.28■□□□□ 0.52
PKNOX1-210ENST00000607049 SCN4AP35499 1836 aa18.28■□□□□ 0.52
PKNOX1-210ENST00000607049 RIMBP2O15034 1052 aa18.27■□□□□ 0.52
PKNOX1-210ENST00000607049 UFL1O94874 794 aa18.27■□□□□ 0.52
PKNOX1-210ENST00000607049 CXCL9Q07325 125 aa18.27■□□□□ 0.52
PKNOX1-210ENST00000607049 SLC4A10Q6U841 1118 aa18.27■□□□□ 0.52
PKNOX1-210ENST00000607049 TBC1D16Q8TBP0 767 aa18.27■□□□□ 0.52
PKNOX1-210ENST00000607049 PLA2G12BQ9BX93 195 aa18.27■□□□□ 0.52
PKNOX1-210ENST00000607049 XDHP47989 1333 aa18.26■□□□□ 0.51
PKNOX1-210ENST00000607049 CACNA1FO60840 1977 aa18.26■□□□□ 0.51
PKNOX1-210ENST00000607049 F6X3S4 739 aa18.26■□□□□ 0.51
PKNOX1-210ENST00000607049 SLFN5Q08AF3 891 aa18.26■□□□□ 0.51
PKNOX1-210ENST00000607049 USP50Q70EL3 339 aaPredicted RBP18.26■□□□□ 0.51
PKNOX1-210ENST00000607049 MPHOSPH8Q99549 860 aa18.26■□□□□ 0.51
PKNOX1-210ENST00000607049 GREM2Q9H772 168 aa18.26■□□□□ 0.51
PKNOX1-210ENST00000607049 BSDC1Q9NW68 430 aaPredicted RBP18.26■□□□□ 0.51
PKNOX1-210ENST00000607049 C9orf78Q9NZ63 289 aaPredicted RBP18.26■□□□□ 0.51
PKNOX1-210ENST00000607049 POLLQ9UGP5 575 aa18.26■□□□□ 0.51
PKNOX1-210ENST00000607049 RTL9Q8NET4 1388 aa18.26■□□□□ 0.51
PKNOX1-210ENST00000607049 RAD17O75943 681 aa18.25■□□□□ 0.51
PKNOX1-210ENST00000607049 ATP2B4P23634 1241 aa18.25■□□□□ 0.51
PKNOX1-210ENST00000607049 SCNN1DP51172 638 aa18.25■□□□□ 0.51
PKNOX1-210ENST00000607049 BEND3Q5T5X7 828 aa18.25■□□□□ 0.51
PKNOX1-210ENST00000607049 SRCIN1Q9C0H9 1055 aa18.25■□□□□ 0.51
PKNOX1-210ENST00000607049 ADARB2Q9NS39 739 aaKnown RBP18.25■□□□□ 0.51
PKNOX1-210ENST00000607049 GPRC5DQ9NZD1 345 aa18.25■□□□□ 0.51
PKNOX1-210ENST00000607049 H7C1D1 291 aa18.24■□□□□ 0.51
PKNOX1-210ENST00000607049 ALDH1L1O75891 902 aa18.24■□□□□ 0.51
PKNOX1-210ENST00000607049 POTEIP0CG38 1075 aa18.24■□□□□ 0.51
PKNOX1-210ENST00000607049 POTEJP0CG39 1038 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms