RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 ITGBL1O95965 494 aaPredicted RBP17.23■□□□□ 0.35
CTSA-213ENST00000606782 GOLGA2Q08379 1002 aa17.23■□□□□ 0.35
CTSA-213ENST00000606782 CCDC30Q5VVM6 783 aa17.23■□□□□ 0.35
CTSA-213ENST00000606782 DDX60Q8IY21 1712 aaKnown RBP17.23■□□□□ 0.35
CTSA-213ENST00000606782 IL16Q14005 1332 aa17.22■□□□□ 0.35
CTSA-213ENST00000606782 RIC3Q7Z5B4 369 aa17.22■□□□□ 0.35
CTSA-213ENST00000606782 MPNDQ8N594 471 aa17.22■□□□□ 0.35
CTSA-213ENST00000606782 TSPYL6Q8N831 410 aa17.22■□□□□ 0.35
CTSA-213ENST00000606782 CREBZFQ9NS37 354 aa17.22■□□□□ 0.35
CTSA-213ENST00000606782 PPIP5K2O43314 1243 aa17.21■□□□□ 0.35
CTSA-213ENST00000606782 KIAA2012Q0VF49 1180 aa17.21■□□□□ 0.35
CTSA-213ENST00000606782 DPP8Q6V1X1 898 aaPredicted RBP17.21■□□□□ 0.35
CTSA-213ENST00000606782 NIM1KQ8IY84 436 aa17.21■□□□□ 0.35
CTSA-213ENST00000606782 ZBTB38Q8NAP3 1195 aaPredicted RBP17.21■□□□□ 0.35
CTSA-213ENST00000606782 CCDC191Q8NCU4 936 aa17.21■□□□□ 0.35
CTSA-213ENST00000606782 IRS4O14654 1257 aaPredicted RBP17.2■□□□□ 0.34
CTSA-213ENST00000606782 SCNN1DP51172 638 aa17.2■□□□□ 0.34
CTSA-213ENST00000606782 AOC3Q16853 763 aa17.2■□□□□ 0.34
CTSA-213ENST00000606782 METTL22Q9BUU2 404 aaPredicted RBP17.2■□□□□ 0.34
CTSA-213ENST00000606782 ZNRF3Q9ULT6 936 aa17.2■□□□□ 0.34
CTSA-213ENST00000606782 LRRC37AA6NMS7 1700 aa17.19■□□□□ 0.34
CTSA-213ENST00000606782 TAF1P21675 1872 aa17.19■□□□□ 0.34
CTSA-213ENST00000606782 DDX58O95786 925 aaKnown RBP17.19■□□□□ 0.34
CTSA-213ENST00000606782 HSP90B1P14625 803 aaKnown RBP17.19■□□□□ 0.34
CTSA-213ENST00000606782 GJA3Q9Y6H8 435 aa17.19■□□□□ 0.34
CTSA-213ENST00000606782 PCCAP05165 728 aaPredicted RBP17.18■□□□□ 0.34
CTSA-213ENST00000606782 CXCL9Q07325 125 aa17.18■□□□□ 0.34
CTSA-213ENST00000606782 EAPPQ56P03 285 aaPredicted RBP17.18■□□□□ 0.34
CTSA-213ENST00000606782 CELF1Q92879 486 aaKnown RBP17.18■□□□□ 0.34
CTSA-213ENST00000606782 TSR2Q969E8 191 aaKnown RBP17.18■□□□□ 0.34
CTSA-213ENST00000606782 ZNF428Q96B54 188 aa17.18■□□□□ 0.34
CTSA-213ENST00000606782 LTBP1Q14766 1721 aa17.18■□□□□ 0.34
CTSA-213ENST00000606782 LMOD1P29536 600 aaPredicted RBP17.17■□□□□ 0.34
CTSA-213ENST00000606782 EPS15P42566 896 aa17.17■□□□□ 0.34
CTSA-213ENST00000606782 IFFO2Q5TF58 517 aa17.17■□□□□ 0.34
CTSA-213ENST00000606782 KSR2Q6VAB6 950 aa17.17■□□□□ 0.34
CTSA-213ENST00000606782 MYD88Q99836 296 aa17.17■□□□□ 0.34
CTSA-213ENST00000606782 DUOX1Q9NRD9 1551 aa17.17■□□□□ 0.34
CTSA-213ENST00000606782 RPS8P62241 208 aaKnown RBP17.16■□□□□ 0.34
CTSA-213ENST00000606782 TWISTNBQ3B726 338 aaPredicted RBP17.16■□□□□ 0.34
CTSA-213ENST00000606782 RTL5Q5HYW3 569 aaPredicted RBP17.16■□□□□ 0.34
CTSA-213ENST00000606782 USP50Q70EL3 339 aaPredicted RBP17.16■□□□□ 0.34
CTSA-213ENST00000606782 CNTROBQ8N137 903 aa17.16■□□□□ 0.34
CTSA-213ENST00000606782 CWC25Q9NXE8 425 aaPredicted RBP17.16■□□□□ 0.34
CTSA-213ENST00000606782 GPRC5DQ9NZD1 345 aa17.16■□□□□ 0.34
CTSA-213ENST00000606782 CLEC11AQ9Y240 323 aa17.16■□□□□ 0.34
CTSA-213ENST00000606782 WDR63Q8IWG1 891 aa17.15■□□□□ 0.34
CTSA-213ENST00000606782 MAP3K2Q9Y2U5 619 aa17.15■□□□□ 0.34
CTSA-213ENST00000606782 CDHR2Q9BYE9 1310 aa17.15■□□□□ 0.34
CTSA-213ENST00000606782 COL4A1P02462 1669 aa17.14■□□□□ 0.33
CTSA-213ENST00000606782 PI4KAP2A4QPH2 592 aa17.14■□□□□ 0.33
CTSA-213ENST00000606782 TMEM88BA6NKF7 163 aa17.14■□□□□ 0.33
CTSA-213ENST00000606782 PDE8AO60658 829 aa17.14■□□□□ 0.33
CTSA-213ENST00000606782 IGKV5-2P06315 115 aa17.14■□□□□ 0.33
CTSA-213ENST00000606782 TNIP1Q15025 636 aa17.14■□□□□ 0.33
CTSA-213ENST00000606782 PI4KAP1Q8N8J0 262 aa17.14■□□□□ 0.33
CTSA-213ENST00000606782 STK31Q9BXU1 1019 aa17.14■□□□□ 0.33
CTSA-213ENST00000606782 YDJCA8MPS7 323 aa17.13■□□□□ 0.33
CTSA-213ENST00000606782 CCDC152Q4G0S7 254 aa17.13■□□□□ 0.33
CTSA-213ENST00000606782 MAP1SQ66K74 1059 aaPredicted RBP17.13■□□□□ 0.33
CTSA-213ENST00000606782 CIAPIN1Q6FI81 312 aa17.13■□□□□ 0.33
CTSA-213ENST00000606782 ADARB2Q9NS39 739 aaKnown RBP17.13■□□□□ 0.33
CTSA-213ENST00000606782 PODXL2Q9NZ53 605 aa17.13■□□□□ 0.33
CTSA-213ENST00000606782 POLLQ9UGP5 575 aa17.13■□□□□ 0.33
CTSA-213ENST00000606782 NSFL1CQ9UNZ2 370 aaKnown RBP17.13■□□□□ 0.33
CTSA-213ENST00000606782 CNTNAP1P78357 1384 aa17.13■□□□□ 0.33
CTSA-213ENST00000606782 SLC4A2P04920 1241 aa17.12■□□□□ 0.33
CTSA-213ENST00000606782 GPSM2P81274 684 aa17.12■□□□□ 0.33
CTSA-213ENST00000606782 WASHC4Q2M389 1173 aa17.12■□□□□ 0.33
CTSA-213ENST00000606782 G2E3Q7L622 706 aa17.12■□□□□ 0.33
CTSA-213ENST00000606782 SEC31BQ9NQW1 1179 aa17.12■□□□□ 0.33
CTSA-213ENST00000606782 PGAP2Q9UHJ9 254 aa17.12■□□□□ 0.33
CTSA-213ENST00000606782 FANCIQ9NVI1 1328 aa17.12■□□□□ 0.33
CTSA-213ENST00000606782 PCNTO95613 3336 aa17.11■□□□□ 0.33
CTSA-213ENST00000606782 VAMP4O75379 141 aa17.11■□□□□ 0.33
CTSA-213ENST00000606782 GMPSP49915 693 aaPredicted RBP17.11■□□□□ 0.33
CTSA-213ENST00000606782 CACNA1FO60840 1977 aa17.11■□□□□ 0.33
CTSA-213ENST00000606782 RAD17O75943 681 aa17.1■□□□□ 0.33
CTSA-213ENST00000606782 NEXNQ0ZGT2 675 aa17.1■□□□□ 0.33
CTSA-213ENST00000606782 TBC1D16Q8TBP0 767 aa17.1■□□□□ 0.33
CTSA-213ENST00000606782 EYA3Q99504 573 aa17.1■□□□□ 0.33
CTSA-213ENST00000606782 MKRN1Q9UHC7 482 aaKnown RBP17.1■□□□□ 0.33
CTSA-213ENST00000606782 RASSF10A6NK89 507 aa17.09■□□□□ 0.33
CTSA-213ENST00000606782 NEURL1BA8MQ27 555 aa17.09■□□□□ 0.33
CTSA-213ENST00000606782 H7C1W4 665 aa17.09■□□□□ 0.33
CTSA-213ENST00000606782 ZC3H15Q8WU90 426 aaKnown RBP17.09■□□□□ 0.33
CTSA-213ENST00000606782 DPF2Q92785 391 aa17.09■□□□□ 0.33
CTSA-213ENST00000606782 JARID2Q92833 1246 aaPredicted RBP17.09■□□□□ 0.33
CTSA-213ENST00000606782 RTL9Q8NET4 1388 aa17.09■□□□□ 0.33
CTSA-213ENST00000606782 C6orf229H3BNL8 230 aa17.08■□□□□ 0.32
CTSA-213ENST00000606782 HSPA1AP0DMV8 641 aaKnown RBP17.08■□□□□ 0.32
CTSA-213ENST00000606782 HSPA1BP0DMV9 641 aaKnown RBP17.08■□□□□ 0.32
CTSA-213ENST00000606782 FLIIQ13045 1269 aa17.08■□□□□ 0.32
CTSA-213ENST00000606782 TTLL11Q8NHH1 800 aa17.08■□□□□ 0.32
CTSA-213ENST00000606782 CTSWP56202 376 aa17.07■□□□□ 0.32
CTSA-213ENST00000606782 CWF19L2Q2TBE0 894 aaKnown RBP17.07■□□□□ 0.32
CTSA-213ENST00000606782 PLA2G12BQ9BX93 195 aa17.07■□□□□ 0.32
CTSA-213ENST00000606782 BCL2L13Q9BXK5 485 aa17.07■□□□□ 0.32
CTSA-213ENST00000606782 DBNDD1Q9H9R9 158 aa17.07■□□□□ 0.32
CTSA-213ENST00000606782 CNOT7Q9UIV1 285 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms