RNA–Protein interactions for RNA: ENST00000606055.1

LINC00458-204, long intergenic non-protein coding RNA 458, humanhuman

TSL 3

Gene LINC00458, Length 425 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-204ENST00000606055 PLIN1O60240 522 aa9.01□□□□□ -0.97
LINC00458-204ENST00000606055 PDE8AO60658 829 aa9.01□□□□□ -0.97
LINC00458-204ENST00000606055 GNAI2P04899 355 aa9.01□□□□□ -0.97
LINC00458-204ENST00000606055 CSF1RP07333 972 aa9.01□□□□□ -0.97
LINC00458-204ENST00000606055 SF3B3Q15393 1217 aaKnown RBP9.01□□□□□ -0.97
LINC00458-204ENST00000606055 CWF19L2Q2TBE0 894 aaKnown RBP9.01□□□□□ -0.97
LINC00458-204ENST00000606055 CRY2Q49AN0 593 aa9.01□□□□□ -0.97
LINC00458-204ENST00000606055 DALRD3Q5D0E6 543 aaKnown RBP9.01□□□□□ -0.97
LINC00458-204ENST00000606055 ITPRIPQ8IWB1 547 aa9.01□□□□□ -0.97
LINC00458-204ENST00000606055 RPAP2Q8IXW5 612 aaPredicted RBP9.01□□□□□ -0.97
LINC00458-204ENST00000606055 PANK1Q8TE04 598 aa9.01□□□□□ -0.97
LINC00458-204ENST00000606055 ZNF622Q969S3 477 aaKnown RBP eCLIP9.01□□□□□ -0.97
LINC00458-204ENST00000606055 CLUAP1Q96AJ1 413 aa9.01□□□□□ -0.97
LINC00458-204ENST00000606055 TRMT112Q9UI30 125 aaKnown RBP9.01□□□□□ -0.97
LINC00458-204ENST00000606055 FBXO3Q9UK99 471 aa9.01□□□□□ -0.97
LINC00458-204ENST00000606055 ATP5J2-PTCD1G3V325 749 aa9□□□□□ -0.97
LINC00458-204ENST00000606055 IRS4O14654 1257 aaPredicted RBP9□□□□□ -0.97
LINC00458-204ENST00000606055 NEFLP07196 543 aa9□□□□□ -0.97
LINC00458-204ENST00000606055 KCNA3P22001 575 aa9□□□□□ -0.97
LINC00458-204ENST00000606055 HOXA10P31260 410 aaPredicted RBP9□□□□□ -0.97
LINC00458-204ENST00000606055 TMC4Q7Z404 712 aa9□□□□□ -0.97
LINC00458-204ENST00000606055 NUTM1Q86Y26 1132 aa9□□□□□ -0.97
LINC00458-204ENST00000606055 TTLL6Q8N841 843 aa9□□□□□ -0.97
LINC00458-204ENST00000606055 MASTLQ96GX5 879 aa9□□□□□ -0.97
LINC00458-204ENST00000606055 TIAM2Q8IVF5 1701 aa9□□□□□ -0.97
LINC00458-204ENST00000606055 ABCC12Q96J65 1359 aa8.99□□□□□ -0.97
LINC00458-204ENST00000606055 NBPF7P0C2Y1 421 aaPredicted RBP8.99□□□□□ -0.97
LINC00458-204ENST00000606055 ERFEQ4G0M1 354 aa8.99□□□□□ -0.97
LINC00458-204ENST00000606055 C20orf194Q5TEA3 1177 aa8.99□□□□□ -0.97
LINC00458-204ENST00000606055 STYK1Q6J9G0 422 aa8.99□□□□□ -0.97
LINC00458-204ENST00000606055 UBE3BQ7Z3V4 1068 aa8.99□□□□□ -0.97
LINC00458-204ENST00000606055 CNKSR1Q969H4 720 aa8.99□□□□□ -0.97
LINC00458-204ENST00000606055 NLRP3Q96P20 1036 aa8.99□□□□□ -0.97
LINC00458-204ENST00000606055 MEIS3Q99687 375 aa8.99□□□□□ -0.97
LINC00458-204ENST00000606055 COG6Q9Y2V7 657 aa8.99□□□□□ -0.97
LINC00458-204ENST00000606055 UTRNP46939 3433 aa8.98□□□□□ -0.97
LINC00458-204ENST00000606055 HMMRO75330 724 aa8.98□□□□□ -0.97
LINC00458-204ENST00000606055 SRGNP10124 158 aa8.98□□□□□ -0.97
LINC00458-204ENST00000606055 NPR1P16066 1061 aa8.98□□□□□ -0.97
LINC00458-204ENST00000606055 CTSWP56202 376 aa8.98□□□□□ -0.97
LINC00458-204ENST00000606055 HDAC1Q13547 482 aaPredicted RBP8.98□□□□□ -0.97
LINC00458-204ENST00000606055 CCDC152Q4G0S7 254 aa8.98□□□□□ -0.97
LINC00458-204ENST00000606055 GRIPAP1Q4V328 841 aa8.98□□□□□ -0.97
LINC00458-204ENST00000606055 ARHGAP27Q6ZUM4 889 aa8.98□□□□□ -0.97
LINC00458-204ENST00000606055 RPGRQ92834 1020 aaKnown RBP8.98□□□□□ -0.97
LINC00458-204ENST00000606055 FAM89AQ96GI7 184 aa8.98□□□□□ -0.97
LINC00458-204ENST00000606055 KAZALD1Q96I82 304 aa8.98□□□□□ -0.97
LINC00458-204ENST00000606055 CRAMP1Q96RY5 1269 aa8.98□□□□□ -0.97
LINC00458-204ENST00000606055 ALDH1B1P30837 517 aa8.97□□□□□ -0.97
LINC00458-204ENST00000606055 FOXO4P98177 505 aa8.97□□□□□ -0.97
LINC00458-204ENST00000606055 ATP8B2P98198 1209 aa8.97□□□□□ -0.97
LINC00458-204ENST00000606055 POLA2Q14181 598 aa8.97□□□□□ -0.97
LINC00458-204ENST00000606055 ANKRD44Q8N8A2 993 aa8.97□□□□□ -0.97
LINC00458-204ENST00000606055 TTLL11Q8NHH1 800 aa8.97□□□□□ -0.97
LINC00458-204ENST00000606055 SSH3Q8TE77 659 aa8.97□□□□□ -0.97
LINC00458-204ENST00000606055 TNNQ9UQP3 1299 aa8.97□□□□□ -0.97
LINC00458-204ENST00000606055 ZBTB22O15209 634 aa8.96□□□□□ -0.98
LINC00458-204ENST00000606055 BBOX1O75936 387 aa8.96□□□□□ -0.98
LINC00458-204ENST00000606055 HSP90AB4PQ58FF6 505 aa8.96□□□□□ -0.98
LINC00458-204ENST00000606055 SOGA3Q5TF21 947 aa8.96□□□□□ -0.98
LINC00458-204ENST00000606055 PRPF40BQ6NWY9 871 aaKnown RBP8.96□□□□□ -0.98
LINC00458-204ENST00000606055 RBM17Q96I25 401 aaKnown RBP8.96□□□□□ -0.98
LINC00458-204ENST00000606055 SUCLG2Q96I99 432 aa8.96□□□□□ -0.98
LINC00458-204ENST00000606055 CRBNQ96SW2 442 aa8.96□□□□□ -0.98
LINC00458-204ENST00000606055 COPRSQ9NQ92 184 aa8.96□□□□□ -0.98
LINC00458-204ENST00000606055 ZNF219Q9P2Y4 722 aaPredicted RBP8.96□□□□□ -0.98
LINC00458-204ENST00000606055 NOP58Q9Y2X3 529 aaKnown RBP8.96□□□□□ -0.98
LINC00458-204ENST00000606055 C21orf2O43822 256 aa8.95□□□□□ -0.98
LINC00458-204ENST00000606055 CIAO1O76071 339 aa8.95□□□□□ -0.98
LINC00458-204ENST00000606055 HCLS1P14317 486 aaPredicted RBP8.95□□□□□ -0.98
LINC00458-204ENST00000606055 IFIT5Q13325 482 aaKnown RBP8.95□□□□□ -0.98
LINC00458-204ENST00000606055 RTL5Q5HYW3 569 aaPredicted RBP8.95□□□□□ -0.98
LINC00458-204ENST00000606055 CC2D2BQ6DHV5 1058 aa8.95□□□□□ -0.98
LINC00458-204ENST00000606055 CEP85Q6P2H3 762 aa8.95□□□□□ -0.98
LINC00458-204ENST00000606055 CDC5LQ99459 802 aaKnown RBP8.95□□□□□ -0.98
LINC00458-204ENST00000606055 TMX4Q9H1E5 349 aaPredicted RBP8.95□□□□□ -0.98
LINC00458-204ENST00000606055 BICC1Q9H694 974 aaKnown RBP8.95□□□□□ -0.98
LINC00458-204ENST00000606055 LRRFIP2Q9Y608 721 aaKnown RBP8.95□□□□□ -0.98
LINC00458-204ENST00000606055 LRRC37AA6NMS7 1700 aa8.94□□□□□ -0.98
LINC00458-204ENST00000606055 CEP350Q5VT06 3117 aa8.94□□□□□ -0.98
LINC00458-204ENST00000606055 ANKRD18BA2A2Z9 1011 aa8.94□□□□□ -0.98
LINC00458-204ENST00000606055 RFX5P48382 616 aaPredicted RBP8.94□□□□□ -0.98
LINC00458-204ENST00000606055 GRAPQ13588 217 aa8.94□□□□□ -0.98
LINC00458-204ENST00000606055 CCDC57Q2TAC2 916 aa8.94□□□□□ -0.98
LINC00458-204ENST00000606055 LMBR1LQ6UX01 489 aa8.94□□□□□ -0.98
LINC00458-204ENST00000606055 DDX46Q7L014 1031 aaKnown RBP8.94□□□□□ -0.98
LINC00458-204ENST00000606055 GRAPLQ8TC17 118 aaPredicted RBP8.94□□□□□ -0.98
LINC00458-204ENST00000606055 RWDD1Q9H446 243 aaPredicted RBP8.94□□□□□ -0.98
LINC00458-204ENST00000606055 BSDC1Q9NW68 430 aaPredicted RBP8.94□□□□□ -0.98
LINC00458-204ENST00000606055 SRGAP3O43295 1099 aa8.93□□□□□ -0.98
LINC00458-204ENST00000606055 RAB11FIP3O75154 756 aa8.93□□□□□ -0.98
LINC00458-204ENST00000606055 CCDC93Q567U6 631 aa8.93□□□□□ -0.98
LINC00458-204ENST00000606055 EPHA10Q5JZY3 1008 aa8.93□□□□□ -0.98
LINC00458-204ENST00000606055 ERC1Q8IUD2 1116 aa8.93□□□□□ -0.98
LINC00458-204ENST00000606055 SYNE4Q8N205 404 aa8.93□□□□□ -0.98
LINC00458-204ENST00000606055 EXOC6Q8TAG9 804 aa8.93□□□□□ -0.98
LINC00458-204ENST00000606055 GCC1Q96CN9 775 aa8.93□□□□□ -0.98
LINC00458-204ENST00000606055 DCTPP1Q9H773 170 aa8.93□□□□□ -0.98
LINC00458-204ENST00000606055 A0A1B0GUL6 1792 aa8.92□□□□□ -0.98
LINC00458-204ENST00000606055 MROH5Q6ZUA9 1318 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms