RNA–Protein interactions for RNA: ENST00000605833.1

VIM-AS1-202, VIM antisense RNA 1, humanhuman

TSL 3 BASIC

Gene VIM-AS1, Length 918 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-AS1-202ENST00000605833 SUPT20HQ8NEM7 779 aa27.31■■□□□ 1.96
VIM-AS1-202ENST00000605833 CAPNS2Q96L46 248 aa27.31■■□□□ 1.96
VIM-AS1-202ENST00000605833 TRMT112Q9UI30 125 aaKnown RBP27.31■■□□□ 1.96
VIM-AS1-202ENST00000605833 MAP2K1Q02750 393 aaPredicted RBP27.3■■□□□ 1.96
VIM-AS1-202ENST00000605833 SP8Q8IXZ3 490 aa27.3■■□□□ 1.96
VIM-AS1-202ENST00000605833 MPNDQ8N594 471 aa27.3■■□□□ 1.96
VIM-AS1-202ENST00000605833 BBOX1O75936 387 aa27.29■■□□□ 1.96
VIM-AS1-202ENST00000605833 RAD17O75943 681 aa27.29■■□□□ 1.96
VIM-AS1-202ENST00000605833 TCIRG1Q13488 830 aa27.29■■□□□ 1.96
VIM-AS1-202ENST00000605833 RALBP1Q15311 655 aa27.29■■□□□ 1.96
VIM-AS1-202ENST00000605833 DDX46Q7L014 1031 aaKnown RBP27.29■■□□□ 1.96
VIM-AS1-202ENST00000605833 VPS33BQ9H267 617 aa27.29■■□□□ 1.96
VIM-AS1-202ENST00000605833 LAS1LQ9Y4W2 734 aaKnown RBP27.29■■□□□ 1.96
VIM-AS1-202ENST00000605833 SH3TC1Q8TE82 1336 aa27.29■■□□□ 1.96
VIM-AS1-202ENST00000605833 COL4A1P02462 1669 aa27.28■■□□□ 1.96
VIM-AS1-202ENST00000605833 KIAA2012Q0VF49 1180 aa27.28■■□□□ 1.96
VIM-AS1-202ENST00000605833 GRAPQ13588 217 aa27.28■■□□□ 1.96
VIM-AS1-202ENST00000605833 GRAPLQ8TC17 118 aaPredicted RBP27.28■■□□□ 1.96
VIM-AS1-202ENST00000605833 CHPF2Q9P2E5 772 aa27.28■■□□□ 1.96
VIM-AS1-202ENST00000605833 CIAPIN1Q6FI81 312 aa27.27■■□□□ 1.96
VIM-AS1-202ENST00000605833 TLL2Q9Y6L7 1015 aa27.27■■□□□ 1.96
VIM-AS1-202ENST00000605833 ECE1P42892 770 aa27.26■■□□□ 1.95
VIM-AS1-202ENST00000605833 GLIS2Q9BZE0 524 aaPredicted RBP27.26■■□□□ 1.95
VIM-AS1-202ENST00000605833 SHTN1A0MZ66 631 aa27.25■■□□□ 1.95
VIM-AS1-202ENST00000605833 CHL1O00533 1208 aa27.25■■□□□ 1.95
VIM-AS1-202ENST00000605833 BCL2L13Q9BXK5 485 aa27.25■■□□□ 1.95
VIM-AS1-202ENST00000605833 AOC2O75106 756 aa27.24■■□□□ 1.95
VIM-AS1-202ENST00000605833 CELF2O95319 508 aaKnown RBP27.24■■□□□ 1.95
VIM-AS1-202ENST00000605833 TRPM4Q8TD43 1214 aa27.24■■□□□ 1.95
VIM-AS1-202ENST00000605833 GPR101Q96P66 508 aaPredicted RBP27.24■■□□□ 1.95
VIM-AS1-202ENST00000605833 TRIM35Q9UPQ4 493 aa27.24■■□□□ 1.95
VIM-AS1-202ENST00000605833 YDJCA8MPS7 323 aa27.23■■□□□ 1.95
VIM-AS1-202ENST00000605833 HDGFL1Q5TGJ6 251 aa27.23■■□□□ 1.95
VIM-AS1-202ENST00000605833 HIRAP54198 1017 aaPredicted RBP27.22■■□□□ 1.95
VIM-AS1-202ENST00000605833 ZNF408Q9H9D4 720 aa27.22■■□□□ 1.95
VIM-AS1-202ENST00000605833 TSKSQ9UJT2 592 aa27.22■■□□□ 1.95
VIM-AS1-202ENST00000605833 MYBBP1AQ9BQG0 1328 aaKnown RBP27.21■■□□□ 1.95
VIM-AS1-202ENST00000605833 CDHR2Q9BYE9 1310 aa27.21■■□□□ 1.95
VIM-AS1-202ENST00000605833 TNIP1Q15025 636 aa27.21■■□□□ 1.95
VIM-AS1-202ENST00000605833 ABHD8Q96I13 439 aa27.21■■□□□ 1.95
VIM-AS1-202ENST00000605833 ATP5J2-PTCD1G3V325 749 aa27.2■■□□□ 1.94
VIM-AS1-202ENST00000605833 RTL5Q5HYW3 569 aaPredicted RBP27.2■■□□□ 1.94
VIM-AS1-202ENST00000605833 SAPCD2Q86UD0 394 aa27.2■■□□□ 1.94
VIM-AS1-202ENST00000605833 PLBD2Q8NHP8 589 aa27.2■■□□□ 1.94
VIM-AS1-202ENST00000605833 CELF1Q92879 486 aaKnown RBP27.2■■□□□ 1.94
VIM-AS1-202ENST00000605833 FAM89AQ96GI7 184 aa27.2■■□□□ 1.94
VIM-AS1-202ENST00000605833 BEGAINQ9BUH8 593 aa27.2■■□□□ 1.94
VIM-AS1-202ENST00000605833 RUNDC1Q96C34 613 aa27.19■■□□□ 1.94
VIM-AS1-202ENST00000605833 ISCA1Q9BUE6 129 aa27.18■■□□□ 1.94
VIM-AS1-202ENST00000605833 CNOT7Q9UIV1 285 aaKnown RBP27.18■■□□□ 1.94
VIM-AS1-202ENST00000605833 ZBTB12Q9Y330 459 aaPredicted RBP27.18■■□□□ 1.94
VIM-AS1-202ENST00000605833 DDX10Q13206 875 aaKnown RBP27.17■■□□□ 1.94
VIM-AS1-202ENST00000605833 WDR43Q15061 677 aaKnown RBP eCLIP27.17■■□□□ 1.94
VIM-AS1-202ENST00000605833 ANKRD13DQ6ZTN6 518 aa27.17■■□□□ 1.94
VIM-AS1-202ENST00000605833 TMC4Q7Z404 712 aa27.17■■□□□ 1.94
VIM-AS1-202ENST00000605833 MICALL2Q8IY33 904 aa27.17■■□□□ 1.94
VIM-AS1-202ENST00000605833 DBNDD1Q9H9R9 158 aa27.17■■□□□ 1.94
VIM-AS1-202ENST00000605833 PGAP2Q9UHJ9 254 aa27.17■■□□□ 1.94
VIM-AS1-202ENST00000605833 NSFL1CQ9UNZ2 370 aaKnown RBP27.16■■□□□ 1.94
VIM-AS1-202ENST00000605833 RIMBP2O15034 1052 aa27.15■■□□□ 1.94
VIM-AS1-202ENST00000605833 DLK2Q6UY11 383 aa27.15■■□□□ 1.94
VIM-AS1-202ENST00000605833 DBF4Q9UBU7 674 aaPredicted RBP27.15■■□□□ 1.94
VIM-AS1-202ENST00000605833 PSMD14O00487 310 aa27.14■■□□□ 1.94
VIM-AS1-202ENST00000605833 HOXB7P09629 217 aa27.14■■□□□ 1.94
VIM-AS1-202ENST00000605833 GPSM2P81274 684 aa27.14■■□□□ 1.94
VIM-AS1-202ENST00000605833 SF3B3Q15393 1217 aaKnown RBP27.14■■□□□ 1.94
VIM-AS1-202ENST00000605833 WASHC4Q2M389 1173 aa27.14■■□□□ 1.94
VIM-AS1-202ENST00000605833 ZC3H15Q8WU90 426 aaKnown RBP27.14■■□□□ 1.94
VIM-AS1-202ENST00000605833 H7C1D1 291 aa27.13■■□□□ 1.93
VIM-AS1-202ENST00000605833 MAP2K2P36507 400 aa27.13■■□□□ 1.93
VIM-AS1-202ENST00000605833 DUSP27Q5VZP5 1158 aa27.13■■□□□ 1.93
VIM-AS1-202ENST00000605833 CDC37L1Q7L3B6 337 aa27.13■■□□□ 1.93
VIM-AS1-202ENST00000605833 SAMD7Q7Z3H4 446 aa27.13■■□□□ 1.93
VIM-AS1-202ENST00000605833 POLLQ9UGP5 575 aa27.13■■□□□ 1.93
VIM-AS1-202ENST00000605833 ADAMTS8Q9UP79 889 aa27.13■■□□□ 1.93
VIM-AS1-202ENST00000605833 SCN9AQ15858 1988 aa27.13■■□□□ 1.93
VIM-AS1-202ENST00000605833 POLR2AP24928 1970 aaKnown RBP27.12■■□□□ 1.93
VIM-AS1-202ENST00000605833 C6orf229H3BNL8 230 aa27.12■■□□□ 1.93
VIM-AS1-202ENST00000605833 EGFRP00533 1210 aa27.12■■□□□ 1.93
VIM-AS1-202ENST00000605833 USP48Q86UV5 1035 aa27.12■■□□□ 1.93
VIM-AS1-202ENST00000605833 DOK7Q18PE1 504 aa27.11■■□□□ 1.93
VIM-AS1-202ENST00000605833 TBC1D10BQ4KMP7 808 aaPredicted RBP27.11■■□□□ 1.93
VIM-AS1-202ENST00000605833 KCNQ5Q9NR82 932 aa27.11■■□□□ 1.93
VIM-AS1-202ENST00000605833 MBIPQ9NS73 344 aa27.11■■□□□ 1.93
VIM-AS1-202ENST00000605833 HYPKQ9NX55 129 aa27.11■■□□□ 1.93
VIM-AS1-202ENST00000605833 RTL9Q8NET4 1388 aa27.1■■□□□ 1.93
VIM-AS1-202ENST00000605833 CASP8AP2Q9UKL3 1982 aa27.1■■□□□ 1.93
VIM-AS1-202ENST00000605833 IRS4O14654 1257 aaPredicted RBP27.1■■□□□ 1.93
VIM-AS1-202ENST00000605833 ECE2O60344 883 aa27.1■■□□□ 1.93
VIM-AS1-202ENST00000605833 HHIPL1Q96JK4 782 aa27.1■■□□□ 1.93
VIM-AS1-202ENST00000605833 CFAP44Q96MT7 982 aa27.1■■□□□ 1.93
VIM-AS1-202ENST00000605833 DPF2Q92785 391 aa27.08■■□□□ 1.93
VIM-AS1-202ENST00000605833 BRPF1P55201 1214 aaPredicted RBP27.07■■□□□ 1.92
VIM-AS1-202ENST00000605833 FAM161AQ3B820 660 aa27.07■■□□□ 1.92
VIM-AS1-202ENST00000605833 TBC1D16Q8TBP0 767 aa27.07■■□□□ 1.92
VIM-AS1-202ENST00000605833 ZIC5Q96T25 663 aa27.07■■□□□ 1.92
VIM-AS1-202ENST00000605833 CCDC85CA6NKD9 419 aa27.06■■□□□ 1.92
VIM-AS1-202ENST00000605833 ADM5C9JUS6 153 aa27.06■■□□□ 1.92
VIM-AS1-202ENST00000605833 HUNKP57058 714 aa27.06■■□□□ 1.92
VIM-AS1-202ENST00000605833 RBM26Q5T8P6 1007 aaKnown RBP27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms