RNA–Protein interactions for RNA: ENST00000605457.5

TUBE1-211, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-211ENST00000605457 RASSF7Q02833 373 aa18.03■□□□□ 0.48
TUBE1-211ENST00000605457 DDX46Q7L014 1031 aaKnown RBP18.03■□□□□ 0.48
TUBE1-211ENST00000605457 SRCIN1Q9C0H9 1055 aa18.03■□□□□ 0.48
TUBE1-211ENST00000605457 NOB1Q9ULX3 412 aaKnown RBP18.03■□□□□ 0.48
TUBE1-211ENST00000605457 OLFM4Q6UX06 510 aa18.02■□□□□ 0.48
TUBE1-211ENST00000605457 PPEF1O14829 653 aaPredicted RBP18.01■□□□□ 0.47
TUBE1-211ENST00000605457 GRAPQ13588 217 aa18.01■□□□□ 0.47
TUBE1-211ENST00000605457 CCDC93Q567U6 631 aa18.01■□□□□ 0.47
TUBE1-211ENST00000605457 GRAPLQ8TC17 118 aaPredicted RBP18.01■□□□□ 0.47
TUBE1-211ENST00000605457 LTBP3Q9NS15 1303 aa18.01■□□□□ 0.47
TUBE1-211ENST00000605457 BCAR3O75815 825 aa18.01■□□□□ 0.47
TUBE1-211ENST00000605457 CTSWP56202 376 aa18.01■□□□□ 0.47
TUBE1-211ENST00000605457 SLC51AQ86UW1 340 aa18.01■□□□□ 0.47
TUBE1-211ENST00000605457 PLA2G12BQ9BX93 195 aa18.01■□□□□ 0.47
TUBE1-211ENST00000605457 GRM8O00222 908 aa18■□□□□ 0.47
TUBE1-211ENST00000605457 CCDC152Q4G0S7 254 aa18■□□□□ 0.47
TUBE1-211ENST00000605457 LTBP1Q14766 1721 aa18■□□□□ 0.47
TUBE1-211ENST00000605457 BBOX1O75936 387 aa17.99■□□□□ 0.47
TUBE1-211ENST00000605457 PRELPP51888 382 aa17.99■□□□□ 0.47
TUBE1-211ENST00000605457 TTLL11Q8NHH1 800 aa17.99■□□□□ 0.47
TUBE1-211ENST00000605457 ARHGAP45Q92619 1136 aa17.99■□□□□ 0.47
TUBE1-211ENST00000605457 CELF1Q92879 486 aaKnown RBP17.99■□□□□ 0.47
TUBE1-211ENST00000605457 API5Q9BZZ5 524 aaKnown RBP17.99■□□□□ 0.47
TUBE1-211ENST00000605457 TAOK3Q9H2K8 898 aa17.99■□□□□ 0.47
TUBE1-211ENST00000605457 ATP6V0A2Q9Y487 856 aa17.99■□□□□ 0.47
TUBE1-211ENST00000605457 RTL9Q8NET4 1388 aa17.99■□□□□ 0.47
TUBE1-211ENST00000605457 CC2D2BQ6DHV5 1058 aa17.98■□□□□ 0.47
TUBE1-211ENST00000605457 RTKN2Q8IZC4 609 aa17.98■□□□□ 0.47
TUBE1-211ENST00000605457 C9orf78Q9NZ63 289 aaPredicted RBP17.98■□□□□ 0.47
TUBE1-211ENST00000605457 UTYO14607 1347 aa17.98■□□□□ 0.47
TUBE1-211ENST00000605457 LMNB1P20700 586 aa17.98■□□□□ 0.47
TUBE1-211ENST00000605457 C9orf131Q5VYM1 1079 aa17.98■□□□□ 0.47
TUBE1-211ENST00000605457 CCDC85AQ96PX6 553 aaPredicted RBP17.98■□□□□ 0.47
TUBE1-211ENST00000605457 SEC31BQ9NQW1 1179 aa17.98■□□□□ 0.47
TUBE1-211ENST00000605457 DUOX1Q9NRD9 1551 aa17.97■□□□□ 0.47
TUBE1-211ENST00000605457 TMC4Q7Z404 712 aa17.97■□□□□ 0.47
TUBE1-211ENST00000605457 RNF181Q9P0P0 153 aa17.97■□□□□ 0.47
TUBE1-211ENST00000605457 A0A1B0GUL6 1792 aa17.96■□□□□ 0.47
TUBE1-211ENST00000605457 NBPF7P0C2Y1 421 aaPredicted RBP17.96■□□□□ 0.47
TUBE1-211ENST00000605457 FKBP4Q02790 459 aaKnown RBP eCLIP17.96■□□□□ 0.47
TUBE1-211ENST00000605457 GRIPAP1Q4V328 841 aa17.96■□□□□ 0.47
TUBE1-211ENST00000605457 SP8Q8IXZ3 490 aa17.96■□□□□ 0.47
TUBE1-211ENST00000605457 GREM2Q9H772 168 aa17.96■□□□□ 0.47
TUBE1-211ENST00000605457 IPO8O15397 1037 aaKnown RBP17.95■□□□□ 0.46
TUBE1-211ENST00000605457 CSF1RP07333 972 aa17.95■□□□□ 0.46
TUBE1-211ENST00000605457 TRIM27P14373 513 aa17.95■□□□□ 0.46
TUBE1-211ENST00000605457 CCT4P50991 539 aaKnown RBP17.95■□□□□ 0.46
TUBE1-211ENST00000605457 RPS8P62241 208 aaKnown RBP17.95■□□□□ 0.46
TUBE1-211ENST00000605457 FOXO4P98177 505 aa17.95■□□□□ 0.46
TUBE1-211ENST00000605457 ATF7IPQ6VMQ6 1270 aa17.95■□□□□ 0.46
TUBE1-211ENST00000605457 FRAT1Q92837 279 aaPredicted RBP17.95■□□□□ 0.46
TUBE1-211ENST00000605457 PSMD1Q99460 953 aa17.95■□□□□ 0.46
TUBE1-211ENST00000605457 USP44Q9H0E7 712 aa17.94■□□□□ 0.46
TUBE1-211ENST00000605457 FAM161AQ3B820 660 aa17.94■□□□□ 0.46
TUBE1-211ENST00000605457 EPHA10Q5JZY3 1008 aa17.94■□□□□ 0.46
TUBE1-211ENST00000605457 TMX4Q9H1E5 349 aaPredicted RBP17.94■□□□□ 0.46
TUBE1-211ENST00000605457 TNNQ9UQP3 1299 aa17.94■□□□□ 0.46
TUBE1-211ENST00000605457 ZC3H4Q9UPT8 1303 aaKnown RBP17.93■□□□□ 0.46
TUBE1-211ENST00000605457 ZNF784Q8NCA9 323 aaPredicted RBP17.93■□□□□ 0.46
TUBE1-211ENST00000605457 KAZALD1Q96I82 304 aa17.93■□□□□ 0.46
TUBE1-211ENST00000605457 SUCLG2Q96I99 432 aa17.93■□□□□ 0.46
TUBE1-211ENST00000605457 YTHDC1Q96MU7 727 aaKnown RBP17.93■□□□□ 0.46
TUBE1-211ENST00000605457 CDC5LQ99459 802 aaKnown RBP17.93■□□□□ 0.46
TUBE1-211ENST00000605457 COL4A5P29400 1685 aa17.92■□□□□ 0.46
TUBE1-211ENST00000605457 ZKSCAN2Q63HK3 967 aa17.92■□□□□ 0.46
TUBE1-211ENST00000605457 INTS3Q68E01 1043 aaKnown RBP17.92■□□□□ 0.46
TUBE1-211ENST00000605457 ANKRD18AQ8IVF6 992 aa17.92■□□□□ 0.46
TUBE1-211ENST00000605457 ZNF277Q9NRM2 450 aaPredicted RBP17.92■□□□□ 0.46
TUBE1-211ENST00000605457 ITGA6P23229 1130 aa17.91■□□□□ 0.46
TUBE1-211ENST00000605457 RTFDC1Q9BY42 306 aaPredicted RBP17.91■□□□□ 0.46
TUBE1-211ENST00000605457 IARSP41252 1262 aaKnown RBP17.9■□□□□ 0.46
TUBE1-211ENST00000605457 LMBR1LQ6UX01 489 aa17.9■□□□□ 0.46
TUBE1-211ENST00000605457 DPP8Q6V1X1 898 aaPredicted RBP17.9■□□□□ 0.46
TUBE1-211ENST00000605457 MPNDQ8N594 471 aa17.9■□□□□ 0.46
TUBE1-211ENST00000605457 CLUAP1Q96AJ1 413 aa17.9■□□□□ 0.46
TUBE1-211ENST00000605457 BICC1Q9H694 974 aaKnown RBP17.9■□□□□ 0.46
TUBE1-211ENST00000605457 RABL6Q3YEC7 729 aaPredicted RBP17.89■□□□□ 0.45
TUBE1-211ENST00000605457 BSDC1Q9NW68 430 aaPredicted RBP17.89■□□□□ 0.45
TUBE1-211ENST00000605457 RCAN3Q9UKA8 241 aa17.89■□□□□ 0.45
TUBE1-211ENST00000605457 CHMP3Q9Y3E7 222 aa17.89■□□□□ 0.45
TUBE1-211ENST00000605457 GPSM2P81274 684 aa17.88■□□□□ 0.45
TUBE1-211ENST00000605457 ANKRD44Q8N8A2 993 aa17.88■□□□□ 0.45
TUBE1-211ENST00000605457 ANKRD18BA2A2Z9 1011 aa17.87■□□□□ 0.45
TUBE1-211ENST00000605457 IGHMBP2P38935 993 aaKnown RBP17.87■□□□□ 0.45
TUBE1-211ENST00000605457 IFIT5Q13325 482 aaKnown RBP17.87■□□□□ 0.45
TUBE1-211ENST00000605457 SUPT20HQ8NEM7 779 aa17.87■□□□□ 0.45
TUBE1-211ENST00000605457 MEIS3Q99687 375 aa17.87■□□□□ 0.45
TUBE1-211ENST00000605457 PODXL2Q9NZ53 605 aa17.87■□□□□ 0.45
TUBE1-211ENST00000605457 NSFL1CQ9UNZ2 370 aaKnown RBP17.87■□□□□ 0.45
TUBE1-211ENST00000605457 UBTFL1P0CB47 393 aaPredicted RBP17.87■□□□□ 0.45
TUBE1-211ENST00000605457 VPS33BQ9H267 617 aa17.87■□□□□ 0.45
TUBE1-211ENST00000605457 AOC3Q16853 763 aa17.86■□□□□ 0.45
TUBE1-211ENST00000605457 CCDC57Q2TAC2 916 aa17.86■□□□□ 0.45
TUBE1-211ENST00000605457 TMEM57Q8N5G2 664 aa17.86■□□□□ 0.45
TUBE1-211ENST00000605457 ZNF526Q8TF50 670 aaPredicted RBP17.86■□□□□ 0.45
TUBE1-211ENST00000605457 MINPP1Q9UNW1 487 aa17.86■□□□□ 0.45
TUBE1-211ENST00000605457 WDR90Q96KV7 1748 aa17.86■□□□□ 0.45
TUBE1-211ENST00000605457 PPIP5K2O43314 1243 aa17.85■□□□□ 0.45
TUBE1-211ENST00000605457 RLBP1P12271 317 aa17.85■□□□□ 0.45
TUBE1-211ENST00000605457 FTSJ3Q8IY81 847 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms