RNA–Protein interactions for RNA: ENST00000604859.1

NEK4P3-201, Transcript of NIMA-related kinase 4 pseudogene 3, humanhuman

BASIC

Gene NEK4P3, Length 544 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P3-201ENST00000604859 SH3TC1Q8TE82 1336 aa16.79■□□□□ 0.28
NEK4P3-201ENST00000604859 CHL1O00533 1208 aa16.79■□□□□ 0.28
NEK4P3-201ENST00000604859 GMPSP49915 693 aaPredicted RBP16.79■□□□□ 0.28
NEK4P3-201ENST00000604859 KIAA2012Q0VF49 1180 aa16.79■□□□□ 0.28
NEK4P3-201ENST00000604859 GRAPQ13588 217 aa16.79■□□□□ 0.28
NEK4P3-201ENST00000604859 TNIP1Q15025 636 aa16.79■□□□□ 0.28
NEK4P3-201ENST00000604859 NEUROD2Q15784 382 aa16.79■□□□□ 0.28
NEK4P3-201ENST00000604859 CIAPIN1Q6FI81 312 aa16.79■□□□□ 0.28
NEK4P3-201ENST00000604859 CYP4F22Q6NT55 531 aa16.79■□□□□ 0.28
NEK4P3-201ENST00000604859 GRAPLQ8TC17 118 aaPredicted RBP16.79■□□□□ 0.28
NEK4P3-201ENST00000604859 GPR101Q96P66 508 aaPredicted RBP16.79■□□□□ 0.28
NEK4P3-201ENST00000604859 TLL2Q9Y6L7 1015 aa16.79■□□□□ 0.28
NEK4P3-201ENST00000604859 GRM1Q13255 1194 aa16.78■□□□□ 0.28
NEK4P3-201ENST00000604859 BEGAINQ9BUH8 593 aa16.78■□□□□ 0.28
NEK4P3-201ENST00000604859 LAS1LQ9Y4W2 734 aaKnown RBP16.78■□□□□ 0.28
NEK4P3-201ENST00000604859 RAD17O75943 681 aa16.77■□□□□ 0.28
NEK4P3-201ENST00000604859 KRT24Q2M2I5 525 aa16.77■□□□□ 0.28
NEK4P3-201ENST00000604859 TMC4Q7Z404 712 aa16.77■□□□□ 0.28
NEK4P3-201ENST00000604859 BCL2L13Q9BXK5 485 aa16.77■□□□□ 0.28
NEK4P3-201ENST00000604859 PGAP2Q9UHJ9 254 aa16.77■□□□□ 0.28
NEK4P3-201ENST00000604859 CDHR2Q9BYE9 1310 aa16.76■□□□□ 0.27
NEK4P3-201ENST00000604859 SAPCD2Q86UD0 394 aa16.76■□□□□ 0.27
NEK4P3-201ENST00000604859 CCDC146Q8IYE0 955 aa16.76■□□□□ 0.27
NEK4P3-201ENST00000604859 PLBD2Q8NHP8 589 aa16.76■□□□□ 0.27
NEK4P3-201ENST00000604859 ZC3H15Q8WU90 426 aaKnown RBP16.76■□□□□ 0.27
NEK4P3-201ENST00000604859 CHPF2Q9P2E5 772 aa16.76■□□□□ 0.27
NEK4P3-201ENST00000604859 CELF2O95319 508 aaKnown RBP16.75■□□□□ 0.27
NEK4P3-201ENST00000604859 MAP2K2P36507 400 aa16.75■□□□□ 0.27
NEK4P3-201ENST00000604859 HIRAP54198 1017 aaPredicted RBP16.75■□□□□ 0.27
NEK4P3-201ENST00000604859 ANKRD13DQ6ZTN6 518 aa16.75■□□□□ 0.27
NEK4P3-201ENST00000604859 ZNF428Q96B54 188 aa16.75■□□□□ 0.27
NEK4P3-201ENST00000604859 RUNDC1Q96C34 613 aa16.75■□□□□ 0.27
NEK4P3-201ENST00000604859 GLIS2Q9BZE0 524 aaPredicted RBP16.75■□□□□ 0.27
NEK4P3-201ENST00000604859 CNOT7Q9UIV1 285 aaKnown RBP16.75■□□□□ 0.27
NEK4P3-201ENST00000604859 TRIM35Q9UPQ4 493 aa16.75■□□□□ 0.27
NEK4P3-201ENST00000604859 THSD7BQ9C0I4 1608 aa16.74■□□□□ 0.27
NEK4P3-201ENST00000604859 YDJCA8MPS7 323 aa16.74■□□□□ 0.27
NEK4P3-201ENST00000604859 H7C1D1 291 aa16.74■□□□□ 0.27
NEK4P3-201ENST00000604859 HOXB7P09629 217 aa16.74■□□□□ 0.27
NEK4P3-201ENST00000604859 HDGFL1Q5TGJ6 251 aa16.74■□□□□ 0.27
NEK4P3-201ENST00000604859 FAM89AQ96GI7 184 aa16.74■□□□□ 0.27
NEK4P3-201ENST00000604859 ABHD8Q96I13 439 aa16.74■□□□□ 0.27
NEK4P3-201ENST00000604859 DBF4Q9UBU7 674 aaPredicted RBP16.74■□□□□ 0.27
NEK4P3-201ENST00000604859 MYBBP1AQ9BQG0 1328 aaKnown RBP16.73■□□□□ 0.27
NEK4P3-201ENST00000604859 AOC2O75106 756 aa16.73■□□□□ 0.27
NEK4P3-201ENST00000604859 SF3B3Q15393 1217 aaKnown RBP16.73■□□□□ 0.27
NEK4P3-201ENST00000604859 WASHC4Q2M389 1173 aa16.73■□□□□ 0.27
NEK4P3-201ENST00000604859 CDC37L1Q7L3B6 337 aa16.73■□□□□ 0.27
NEK4P3-201ENST00000604859 HHIPL1Q96JK4 782 aa16.73■□□□□ 0.27
NEK4P3-201ENST00000604859 ISCA1Q9BUE6 129 aa16.73■□□□□ 0.27
NEK4P3-201ENST00000604859 NSFL1CQ9UNZ2 370 aaKnown RBP16.73■□□□□ 0.27
NEK4P3-201ENST00000604859 DDX60Q8IY21 1712 aaKnown RBP16.73■□□□□ 0.27
NEK4P3-201ENST00000604859 ATP5J2-PTCD1G3V325 749 aa16.72■□□□□ 0.27
NEK4P3-201ENST00000604859 WDR43Q15061 677 aaKnown RBP eCLIP16.72■□□□□ 0.27
NEK4P3-201ENST00000604859 TRPM4Q8TD43 1214 aa16.72■□□□□ 0.27
NEK4P3-201ENST00000604859 HYPKQ9NX55 129 aa16.72■□□□□ 0.27
NEK4P3-201ENST00000604859 POLR2AP24928 1970 aaKnown RBP16.71■□□□□ 0.27
NEK4P3-201ENST00000604859 LRRC37AA6NMS7 1700 aa16.71■□□□□ 0.27
NEK4P3-201ENST00000604859 DDX10Q13206 875 aaKnown RBP16.71■□□□□ 0.27
NEK4P3-201ENST00000604859 MICALL2Q8IY33 904 aa16.71■□□□□ 0.27
NEK4P3-201ENST00000604859 DPF2Q92785 391 aa16.71■□□□□ 0.27
NEK4P3-201ENST00000604859 CELF1Q92879 486 aaKnown RBP16.71■□□□□ 0.27
NEK4P3-201ENST00000604859 ZNF408Q9H9D4 720 aa16.71■□□□□ 0.27
NEK4P3-201ENST00000604859 ZBTB12Q9Y330 459 aaPredicted RBP16.71■□□□□ 0.27
NEK4P3-201ENST00000604859 DUOX1Q9NRD9 1551 aa16.71■□□□□ 0.27
NEK4P3-201ENST00000604859 SHTN1A0MZ66 631 aa16.7■□□□□ 0.26
NEK4P3-201ENST00000604859 RIMBP2O15034 1052 aa16.7■□□□□ 0.26
NEK4P3-201ENST00000604859 TRIM28Q13263 835 aaKnown RBP16.7■□□□□ 0.26
NEK4P3-201ENST00000604859 DUSP27Q5VZP5 1158 aa16.7■□□□□ 0.26
NEK4P3-201ENST00000604859 CFAP44Q96MT7 982 aa16.7■□□□□ 0.26
NEK4P3-201ENST00000604859 POLLQ9UGP5 575 aa16.7■□□□□ 0.26
NEK4P3-201ENST00000604859 ADAMTS8Q9UP79 889 aa16.7■□□□□ 0.26
NEK4P3-201ENST00000604859 C6orf229H3BNL8 230 aa16.69■□□□□ 0.26
NEK4P3-201ENST00000604859 PSMD14O00487 310 aa16.69■□□□□ 0.26
NEK4P3-201ENST00000604859 CA12O43570 354 aa16.69■□□□□ 0.26
NEK4P3-201ENST00000604859 GPSM2P81274 684 aa16.69■□□□□ 0.26
NEK4P3-201ENST00000604859 RTL5Q5HYW3 569 aaPredicted RBP16.69■□□□□ 0.26
NEK4P3-201ENST00000604859 USP48Q86UV5 1035 aa16.69■□□□□ 0.26
NEK4P3-201ENST00000604859 DBNDD1Q9H9R9 158 aa16.69■□□□□ 0.26
NEK4P3-201ENST00000604859 IRS4O14654 1257 aaPredicted RBP16.68■□□□□ 0.26
NEK4P3-201ENST00000604859 BRPF1P55201 1214 aaPredicted RBP16.68■□□□□ 0.26
NEK4P3-201ENST00000604859 RPS8P62241 208 aaKnown RBP16.68■□□□□ 0.26
NEK4P3-201ENST00000604859 SAMD7Q7Z3H4 446 aa16.68■□□□□ 0.26
NEK4P3-201ENST00000604859 EYA3Q99504 573 aa16.68■□□□□ 0.26
NEK4P3-201ENST00000604859 TSKSQ9UJT2 592 aa16.68■□□□□ 0.26
NEK4P3-201ENST00000604859 RPS12P25398 132 aaKnown RBP16.67■□□□□ 0.26
NEK4P3-201ENST00000604859 RIC3Q7Z5B4 369 aa16.67■□□□□ 0.26
NEK4P3-201ENST00000604859 KCNQ5Q9NR82 932 aa16.67■□□□□ 0.26
NEK4P3-201ENST00000604859 CASP8AP2Q9UKL3 1982 aa16.67■□□□□ 0.26
NEK4P3-201ENST00000604859 ECE2O60344 883 aa16.66■□□□□ 0.26
NEK4P3-201ENST00000604859 DOK7Q18PE1 504 aa16.66■□□□□ 0.26
NEK4P3-201ENST00000604859 TBC1D10BQ4KMP7 808 aaPredicted RBP16.66■□□□□ 0.26
NEK4P3-201ENST00000604859 ZBTB38Q8NAP3 1195 aaPredicted RBP16.66■□□□□ 0.26
NEK4P3-201ENST00000604859 TBC1D16Q8TBP0 767 aa16.66■□□□□ 0.26
NEK4P3-201ENST00000604859 MBIPQ9NS73 344 aa16.66■□□□□ 0.26
NEK4P3-201ENST00000604859 CCDC85CA6NKD9 419 aa16.65■□□□□ 0.26
NEK4P3-201ENST00000604859 ZNF853P0CG23 659 aa16.65■□□□□ 0.26
NEK4P3-201ENST00000604859 HSP90B1P14625 803 aaKnown RBP16.65■□□□□ 0.26
NEK4P3-201ENST00000604859 HUNKP57058 714 aa16.65■□□□□ 0.26
NEK4P3-201ENST00000604859 NOGQ13253 232 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms